Xiphophorus hellerii (green swordtail): 116720589
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Entry
116720589 CDS
T07363
Symbol
psip1
Name
(RefSeq) PC4 and SFRS1-interacting protein isoform X1
KO
K25057
PC4 and SFRS1-interacting protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116720589 (psip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116720589 (psip1)
Spliceosome [BR:
xhe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
116720589 (psip1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
Motif
Other DBs
NCBI-GeneID:
116720589
NCBI-ProteinID:
XP_032419831
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Position
5:complement(2507007..2520432)
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AA seq
517 aa
AA seq
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MAGDWKPGDLIFAKMKGYPHWPARIDEVPDGAVKPSNIKYPIFFFGTHETAFLGPKDIFP
YQQHKEKYAKPNKRKGFNEGLWEIENNPKVELTAPKPVPPPSFLEKDLESGPEGEEDAAD
KGVKPKVPGKEAEQENDDEEEEEKEEEEGSLMSEQGPQIQDVSAQKESTDPSKPKRGRKK
KGEQENEKNEDPGSPVSPSGGDAPKRRGRKPKTEKLLLLQQDQHGSGSEMETNESEKKRK
RAAEDKQLNGEEEKRKKREGSKGKEVELKESEAKKKKDNGSSGSDDDESQKSKGRKKLQN
AEADKDGRRWKADEPREADKEDVKKPEVGPKKKEMSTDLKLQKLHSEIKISLKIDNPDVK
KCLDALDEIGSLQVTTQHLQKHSELIATLKKIRKFKASQDIMDKATMLYNKFKTMFLVGE
GDCVLSQVLNKSLAEQRQHEEAKRGALKRAEHVKDCGTEPRRQSHADGAVTPSLIKSSCS
ADKVANGDASPEEKKTDKMEDASAGENHSPPKLQETA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggccggagactggaagccaggcgacctgatttttgccaaaatgaagggttatcctcac
tggcctgcgaggatcgatgaagtgccagacggtgctgtgaaaccgtccaacatcaaatat
ccgattttcttcttcggcactcatgaaacagcgtttcttgggccgaaggacatttttccg
taccaacaacacaaagaaaaatatgcgaaaccaaacaaaaggaaaggcttcaatgaagga
ttgtgggagatcgaaaacaacccaaaagttgagctgactgcgcccaagccggttcctcct
ccttccttcctggaaaaggatttggaaagcggtccggaaggagaagaagacgcagccgat
aaaggagtcaaacccaaagttccaggaaaagaggctgagcaggagaatgatgatgaggag
gaggaggagaaagaggaggaggaagggtctctgatgtctgagcagggtcctcagatccag
gatgtttctgctcagaaagaatcgactgatccctcaaaacccaaaagaggaaggaagaag
aagggtgagcaggagaacgaaaaaaacgaagatcctggaagccccgttagtccatcaggt
ggagacgctccgaaacggcgaggcaggaagccgaaaaccgagaagctgctcctgctgcag
caggaccaacacggctctgggagcgaaatggagacgaacgagtctgagaagaagcgaaag
agggcagcggaggacaagcagctgaatggagaagaagagaagaggaagaagagggagggc
agcaaggggaaggaggtggagctaaaggagtcagaggccaagaagaagaaggacaacggc
tcgtctggctcggacgacgacgagtctcagaaaagcaaagggaggaagaagctgcagaac
gcggaggcggataaagacgggcggcgctggaaagccgacgaaccgagagaggccgacaaa
gaagatgtgaagaaacctgaggtgggacccaagaagaaagaaatgtcaactgacctgaaa
ttacaaaaactccacagtgagatcaagatttccctgaaaatcgacaacccggatgtgaag
aaatgtttggacgcgttggacgagatcggttctcttcaggtgacgactcagcacctgcag
aagcacagcgaactcatcgccacgctcaagaagatccggaagttcaaggccagccaggac
atcatggacaaagccaccatgctgtacaacaagttcaagacgatgttcctggtgggcgag
ggcgactgcgtgctgagccaggtgttgaacaagtcgctcgccgagcagcggcagcatgaa
gaggccaagagaggagcgctgaagagagcagagcacgtcaaggactgtggcacagagccg
cgccggcagtcacatgctgacggcgctgtgacgccatcgctgatcaaatcttcctgctct
gcagacaaggtggccaacggcgacgccagccctgaggagaagaagacggacaagatggag
gacgcctcggcgggagaaaaccacagtcctccgaaacttcaggagacggcctga
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