Xiphophorus hellerii (green swordtail): 116720592
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Entry
116720592 CDS
T07363
Symbol
pex6
Name
(RefSeq) peroxisome biogenesis factor 6
KO
K13339
peroxin-6
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116720592 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116720592 (pex6)
Membrane trafficking [BR:
xhe04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
116720592 (pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
DUF815
AAA_33
RuvB_N
AAA_22
AAA_19
nSTAND3
Vps4_C
AAA_30
AAA_18
TIP49
TsaE
AAA_7
RNA_helicase
Cytidylate_kin
NPHP3_N
Mg_chelatase
AAA_28
PEX6_4th
AAA_25
AAA_17
AAA_14
IstB_IS21
AAA_24
Parvo_NS1
PhoH
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
116720592
NCBI-ProteinID:
XP_032419838
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All DBs
Position
5:8420388..8436697
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AA seq
1052 aa
AA seq
DB search
MAVQIQLSCLENFPAHISPLDVLALESDLESVFQHGTNQPTVLFTPNQPQLCDRTGILLQ
VHPTTMEEISSAGGSSCLTADSESGLRVRFFTSQYFLKHFRFQRCSYAGTIRPLEPVSLD
RVVLGARSRQSLCWAGREQFTGGLLELCHLGQEPLARQGDPFLLSHHPLFGDDTGQVQQR
LLELLVLECSPVKQGRITANTSLVLTDCWDCADPPGPSLPGRSLGLSVSDFAHYADSVGS
RSLLDSWSSLGSGLPDVLQALECRLDVRVVDTQRWYWVKGKQGALVDTDSCMFLSKQLLL
RLGLFNHEWVRLSRPAGSGRGPGEEVNVRAAPCRERLVSAVVVDLGPELTIHDDVGFISA
TLWFNMTEGEKLPVKSCTLRMKRWKSALEHLGQRSDSYCLSASLPFATELHIQPVSSPQH
SNLSFPDNLLAEHFTTPRVISQGDILTVPAENHPELLEYNAEGIRRCPVLYFKVQKALPS
ANGGGEALLADEAHTSLYMGTFTNSPVPCCCVDEESLWRSLAPSGLNKTVDLLSDLILPH
LQHRESLSACTVILQGPAGSGKMTVVRAASRRLHLHLLKVNCVTVCADTPAAAEVKLSSV
FQRANALQPCVLLLRNLHLLLKGAAEDNGRVKAVLCQLLGSAPTSVVVVATVCRARDLSI
MGAFIHQVEMESPTEEQRLAMLVGLSRELHLGRDVNLERLSKLTAGFVLGDLSALLTEAG
RAACRRLIHTCGGSLQEDLCSSGVTIMKQDFCCALETLQSAQSKAIGAPKIPNVCWEDVG
GLEHVKREILDTVQLPLQRPELLSLGLNRTGVLLYGPPGTGKTLLAKAVATECAMTFLSV
KGPELINMYVGQSEENIREVFHKARSAVPCVVFFDELDSLAPNRGRSGDSGGVMDRVVSQ
LLAELDSLQSSAGVFVIGATNRPDLLDQSLLRPGRFDKLVYVGINEDRVSQLQVLQAILR
KFQLDPAVNLQDVVDRCPTRMTGADLYALCSDAMTAAIKRKIQQINDGLDSEDSPVLLSA
EDFSSALKNFRPSVSEAELLRYRSIHQELCGQ
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagattcagttgagttgtttggagaattttcccgcacacattagtcctctg
gatgttctggccctggaatctgacctggaatctgttttccaacatggcaccaaccagccc
accgtcctcttcaccccgaaccagcctcagctctgtgacaggacgggcattttactgcaa
gttcacccgaccaccatggaggagattagcagcgccgggggtagtagctgcctaactgcc
gacagcgagtccggactccgtgtccgcttcttcaccagccagtatttcctgaaacacttt
cggttccagcggtgttcatacgccggaactatcaggcctctggagccggtcagcctggac
agggtggtactcggagcccgcagcaggcagagcctctgctgggcaggaagggagcagttc
accggtggactgctggagctctgtcacttggggcaggagccgctggcccgtcaaggagac
ccgtttctcctgtcccatcatccactgtttggagacgacacgggacaggtgcaacagcgc
ctcctggagctcctggtgctggaatgcagtccagtgaagcaggggagaatcacagccaac
acctctctggtcctgaccgactgctgggactgcgcggaccctccaggcccgtcgttgcca
ggcagatctctcggactgagcgtgtcagactttgctcattacgccgacagcgttgggtct
cggtctctcctggatagctggagtagtctgggctctgggttgccggacgtcctgcaggcc
ttggagtgcaggttagacgtgcgcgtggtggacactcagcgatggtactgggtcaaaggc
aagcaaggagcacttgtggacacagacagctgcatgttcctgagcaagcagctgcttctg
aggctggggctgttcaaccatgagtgggtgaggttgtccaggcctgcagggagcggcaga
gggccgggggaagaggtcaatgtcagagctgccccctgcagagagcgcctggtctctgca
gtagtggtggatctgggtccagaactgacgatccacgacgatgtgggtttcatctcagcg
actctgtggttcaatatgacagaaggagaaaagcttcccgtgaagagctgcacactaagg
atgaagaggtggaaatcggctcttgaacatctcgggcagcgctctgacagttactgcctc
tcagcttctctgccgtttgccactgagcttcacatccagccggtcagctctccgcagcac
agcaacctcagcttccccgacaacctgctggccgagcatttcaccacaccacgcgtgatt
tcacagggagacatcctgacggttcctgctgaaaaccatccagagctgctggaatacaat
gcagaggggattcgcaggtgtccggttctgtactttaaagttcagaaggctctcccatct
gctaacggagggggagaagctcttctggctgatgaggctcacacctcactctacatggga
acgttcaccaacagccctgttccctgctgctgcgtggatgaagagtctctgtggagaagc
ctggctccttctggcctcaacaagaccgtcgacctcctcagtgacctcatcctgcctcac
ctgcagcacagagagtctctgtctgcttgcaccgtcatcctccaaggtcctgcaggcagc
ggaaagatgactgtggtcagagcggcgagtcgcagactccacctccacctgctgaaggtg
aactgtgtgactgtgtgtgcagacactcctgcagctgcagaagtgaaactgtcgtcggtg
ttccagcgagccaacgcgctgcagccgtgtgtcctgctgctcagaaacctgcatctcctg
ctaaaaggagctgctgaagacaatggccgggtcaaggcggttctgtgccagctgctcggc
agcgcccccaccagtgtggtagttgtggccacggtttgcagagctcgggatctctccatc
atgggggcatttatccaccaggtggagatggagagccccacagaggagcagcggctcgcc
atgttggtaggtctgagtcgagagcttcatctggggagagacgtcaacctggagcgactg
tccaagctaacagcaggttttgtgctgggagatctgagcgctcttctgactgaagctgga
agagctgcctgcaggaggctgatccacacctgtggtggcagcctgcaggaggacttgtgc
tccagcggagtgaccatcatgaaacaggacttctgctgcgctctggagacgctgcagagc
gcccagtctaaagccatcggagccccaaagatccctaatgtgtgctgggaggacgttgga
gggttggagcatgtgaagagggaaatcctggacactgtgcagcttcctctgcagcgtcct
gagctcctgtctttgggtctgaaccgaaccggagtcctgctgtacggaccgcccggtaca
ggaaagaccctgctggccaaggctgtggccaccgaatgcgccatgaccttcctcagtgtc
aaaggtccagagctcatcaacatgtatgtgggtcagagtgaagaaaacatccgagaagtg
ttccacaaagcgcgctcggctgttccctgtgtcgtcttctttgacgagctggactctctg
gcgcccaacagggggcgcagtggagactctggaggagtgatggacagagttgtgtctcaa
ctgctggctgaactggactcgctgcagtcgtctgctggagtttttgtgatcggagccaca
aaccgtccggatctgctggaccagtcgctgctcagacccggaaggtttgataaactggtc
tatgttgggatcaatgaggaccgcgtctcccagctgcaggttctccaggccatcctcaga
aagttccagttggatccggctgtgaatctgcaggatgtggtggatcgctgcccgactcgc
atgaccggcgccgacctgtacgctctgtgctcagacgccatgacggcggccatcaagaga
aaaatccaacagatcaacgatggtctggattcagaggactctcctgtcctcctctctgca
gaggatttctcttctgctctgaaaaactttagaccttctgtttccgaagcggagctgctg
cggtaccgaagcattcaccaggaactctgcggacagtag
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integrated database retrieval system
