Xiphophorus hellerii (green swordtail): 116720632
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Entry
116720632 CDS
T07363
Symbol
thumpd1
Name
(RefSeq) THUMP domain-containing protein 1
KO
K06963
tRNA acetyltransferase TAN1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xhe03016
]
116720632 (thumpd1)
Transfer RNA biogenesis [BR:
xhe03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
116720632 (thumpd1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
THUMP
PGA2
RNase_P_Rpp14
Motif
Other DBs
NCBI-GeneID:
116720632
NCBI-ProteinID:
XP_032419896
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All DBs
Position
5:29329127..29332604
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AA seq
320 aa
AA seq
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MSAAQNESRKRSKKRFVSGQQGKRWKGSRELEVGMQGILITCNMNERKCTAEAFNLLNEY
ADKLYGPEKLQNNKGSSSSEEEEAEEEDVDVALKKEVAQLQSSAGKRERRFQALESGANN
VIFIRTHNLEPDKLVHHILSDLHSTKKKKSRVILRMLPVTGTCKAFQEDMLKYLTIFLEP
WFKTPHSATYQIAFKARNSSHNKREEIIKSIAGLVGKLNPKNKVDLTNPELTIIVEVIKA
VCCVSVARDYTLYRKYNVQEVVKEDAAKTKTDANAAEQRDEHNGGEVEKDKEEEAAQDEE
KTGAQNEEQQEVHKDEGGGE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgcgcagaacgagtcgaggaagcggagcaagaagcgctttgtgtccggtcag
cagggcaagcggtggaagggctcccgggagctggaggtgggaatgcaggggatcctcatc
acctgcaacatgaacgagagaaagtgcaccgcggaggccttcaacctgctcaacgagtac
gcggacaagctctacggaccagagaagcttcagaacaacaaaggaagcagcagcagtgag
gaagaagaagccgaagaagaagatgtagacgtggcgttgaagaaggaagtcgcacagctt
cagtcgtctgcaggcaaacgggagaggcgcttccaggccctggagagcggcgccaacaat
gtcatcttcatcagaactcacaatctggaacctgacaaattggttcatcacattctgtct
gacctccactccaccaagaaaaagaaatcacgagtgatcctccggatgctcccagtaacc
ggaacgtgcaaggcgttccaggaagacatgctgaaatacctgactatcttcttagagccc
tggttcaaaacgccacacagtgcaacctaccagattgccttcaaggcccgaaacagcagc
cataacaagagagaggaaatcatcaaatccatcgcaggcctcgttgggaagctgaacccg
aaaaacaaggtggacctgacgaaccccgaactgacgataatcgtggaggtcatcaaggcc
gtgtgctgcgtcagcgtggccagagactatacgctgtacaggaagtacaatgttcaggaa
gtggtaaaagaggacgcggccaagacgaaaaccgacgcgaacgcggccgaacagagagac
gagcacaacggaggggaggtggagaaggacaaggaggaggaagctgcacaagatgaggag
aaaactggagcacagaacgaagagcagcaggaggttcataaggacgaaggtggcggagaa
taa
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