Xiphophorus hellerii (green swordtail): 116720654
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Entry
116720654 CDS
T07363
Symbol
arhgef38
Name
(RefSeq) rho guanine nucleotide exchange factor 38 isoform X1
KO
K20711
Rho guanine nucleotide exchange factor 38
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116720654 (arhgef38)
Membrane trafficking [BR:
xhe04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
116720654 (arhgef38)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
BAR
SH3_9
SH3_1
Motif
Other DBs
NCBI-GeneID:
116720654
NCBI-ProteinID:
XP_032419923
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Position
5:16569351..16585178
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AA seq
802 aa
AA seq
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MDPREAGGGEKDKERQIKRKNRPVFLRYLERRKTDTIVVDDMAKGDINLGTLVRRSQSDK
TEYSAKIKDKLMPLDLSALPSPVLDVEEIWSRKMSRRAKVIKELVQTEKDYLTDLELCIR
EVVQPLRVLQVVDVDRLFTNMETVCEVSAALLNRMHMAMSDPDPEAVVIGEVFIQAKAAL
EDVYKIYCYHHDDANMSLKAYEKEEQIKQHFTICILALKKIYDQEGKPNLLDMGSLLIKP
VQRIMKYPLLLGELWQATPEDHIDYLPLQEALTAAKIINVNINEFRRRKDIVMKYKRLEN
DEGTLRGKLNKINIHSLRKKGDRFAGYLKILTGVEPQVRDEVFDKEEKLFRSLEKAVRQL
AKNVNCYVQYTQEMVPVAVQNVKDMENIITDPSKADTNGSSHKNGKDPYKYFKERMEELV
LLPLTSLQGMFTAPQKLIQKRYDKLLDYCCRLERSSSFASSSSTSTVSSTASPASDAPPG
PAKRDYEAINALLVDELQRFNMAAYTILTNCVLCLVALLRGLMVCALVGAPAVHQLPPPL
SNMVEVQNSIMDELNNLTFVKDNAQKLMERKVSFERQRDKKTVVQEVQHQTEEQRAWLLA
EYPPNRLYQLKRKCNGCQEQDLSLLEGELVALLEDTDPLGSSSRWLVHNGGDKGYVYSTF
LKQYNPLRDSQRANQKAKEQQQPPVITYEDFDDLSLFVSPSSSSMRSLSLNTTDSSSTLS
GLQGELENAEELDESVDGDTQQYYAVYAFHARCEQELSLQEYQHVRILQFCDLGGNKQWW
LAEANGQKGYVPANYLGRMSYA
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggatcccagggaggccggtgggggtgagaaggacaaggaaagacagataaaaagaaaa
aaccggcctgtgttcctgcggtacctggagaggagaaagacggacactatagtggtcgat
gacatggccaaaggtgacatcaacctggggacgctggtgaggaggagtcagtctgacaag
acggagtacagcgctaaaattaaagacaaattgatgccacttgacctgtcagctcttccc
tctccggtgctggacgtggaagagatttggtccaggaagatgagccgcagggcgaaagtg
ataaaagaacttgtgcaaactgaaaaggactacctcactgacttggaactgtgcatcaga
gaagtcgtccagcctctacgagtgttacaggttgttgacgtagaccgacttttcaccaac
atggagacggtgtgtgaggtgtctgccgctcttcttaacagaatgcacatggccatgtct
gacccagatccagaagcagtcgtcataggggaagtgtttattcaggcaaaggcagcttta
gaagatgtatataagatttattgttaccaccatgacgatgccaacatgtctttgaaagcc
tatgagaaggaggaacagataaagcagcattttactatatgtatcttagcattgaaaaaa
atctatgaccaagaaggaaaacccaatttgttggacatgggctccctgctgatcaaacca
gtccagaggatcatgaagtacccattgcttctgggggaactttggcaggctacccctgaa
gaccacattgactatctgcccctgcaggaggcgctcaccgctgccaagatcataaatgtt
aacatcaatgagttcaggagacggaaagacatagttatgaagtacaagaggttagaaaac
gatgaaggcacgctgaggggcaagctaaacaagattaacatccactctctccggaagaaa
ggagacaggtttgcaggatatctgaagattctcactggagtagaaccacaggtgagagat
gaagtgtttgataaggaagagaaactgttcaggagtttggaaaaagctgtgaggcaactg
gccaagaatgttaactgttatgtgcaatacactcaggagatggtgcctgttgctgttcag
aacgtgaaggacatggaaaacattattacggatccaagcaaagcagacacaaatggctcg
tcacacaagaatggcaaagatccttataagtactttaaagagcgaatggaggagttggtt
ctgctgcccctcacctctctgcagggcatgttcacagctccgcagaagctcatccagaag
cgttatgacaagctgctcgactactgctgccgcttggagcgctcctcctcttttgcatcc
tcatcctccacctccaccgtgtcctccaccgcctcaccagcgtcagatgcgcctcctggt
cctgccaagagagactatgaagccatcaatgctttgctagtggatgagttgcagaggttc
aacatggcggcttatactatcctgacaaactgcgtgctgtgtctggtggccctgctcaga
ggactgatggtttgcgctttggttggagctccggctgttcaccagctgcctcctccattg
tcaaacatggttgaagtgcagaacagcatcatggatgagctgaacaatctgacatttgtg
aaggacaatgctcagaagttaatggagagaaaagtcagctttgagaggcaacgagacaaa
aaaactgtggtgcaggaggtgcagcatcaaacagaggaacagcgagcctggctgctggcg
gagtacccaccgaaccgcctctaccagctgaagaggaagtgtaatggctgtcaggagcag
gacctcagcctgctggagggagagctggtggccttgttggaggatacagaccctttaggc
agcagcagccgttggctggtgcacaacggaggtgacaaaggctatgtctactccactttc
ctgaagcagtacaaccctctgagggactcccagcgggcaaaccagaaggccaaagagcag
cagcagcctcctgtcatcacatatgaggactttgacgatctcagcctgtttgtgtcaccc
agcagcagcagcatgcgtagcctcagcctgaacaccacagacagcagctcaaccctctca
ggtctgcagggagagctggagaacgctgaagaactggacgagtcggtggatggtgacacc
caacagtattatgccgtttatgcatttcacgcacgctgtgaacaggagctgtccctgcag
gagtaccagcacgtccgcatactccagttctgtgacctgggcggaaacaagcagtggtgg
ttggctgaggccaatggacagaagggatacgtccctgctaactaccttggcagaatgtca
tatgcatga
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