Xiphophorus hellerii (green swordtail): 116720704
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Entry
116720704 CDS
T07363
Symbol
sdk1
Name
(RefSeq) protein sidekick-1 isoform X1
KO
K16353
protein sidekick
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116720704 (sdk1)
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
Other
116720704 (sdk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Ig_2
FN3_DSCAM-DSCAML_C
ig
Pur_ac_phosph_N
Fn3_VIN3
V-set
Motif
Other DBs
NCBI-GeneID:
116720704
NCBI-ProteinID:
XP_032419990
LinkDB
All DBs
Position
5:complement(32726744..33220569)
Genome browser
AA seq
2163 aa
AA seq
DB search
MNPGGIRERSRNGNRPLFLMILLACSCHMLHGQEVAPYLQGGERGQQVVLEGNRLVLTCP
AGGSWPLQYRWTLNNTNITDWTPQYRLSVPSLQRADAGLYQCMVRNRMGAVIHRRTEVHV
AFLGNFTSGEERKTATQGRAVIISPPPLASFPQPLVTWYKDGHKIIPNNRLAITLDNQLV
VLVTTAADAGRYHVEAVNEMTGEIVISPAVYLSISVGKKNRWSTDPGSELVAPDIVIGPK
NTTVVLGKEATLECIANARPVDGLAVLWKRDGHRLASGRRLIVPTATSSDAGLYVCEVLV
SNSTIKPMEARGYLTVMEPPSLTVQPKRKIFADLDRNIEIPCKASGVPQPRIEWYKDTVP
LSKLANARYKVSSAAGLTVRKVQPGDGGIFQCFARSPAGEIQAHTELLVSSVAPTLLSPP
FDQTVTDGDMALFTCQNSGAPKPAVTWRKGSQIIASGSVQVPRFTLLQSGSLQIQPVSIQ
DSGEFTCIVSNSEGTINTTAALTVWSRTVISVPPEDQRVIKGTTAILACNATHDPRVNIS
FKWYRGGVTVLPSSGGRVSVQPGSLTISQTWSGDIGDYICSVMSQAGNDSQSARLEVIEL
PHSPRSLTARLNDSDSRSVRLSWLRPFDGNSPLLYYILELSENNSPWKVYLSEVDPAVSE
VSVGGLTPARTYQFRLCAVNQVGRGQYSAETQRMMLREEAPSAPPNNIVASGRTNQSIMV
QWQPPPESELNGILRGYVLRYRLAGLPGDYQEKNISSPETNYCLLKDLIIWTQYQIQVAA
YTGAGLGVYSRPVTEYTLQGVPTAPPQEVEVVAINSTTIRFTWNPPPQQFINGINQGYKL
LVWPEQSPEEVRVVTITPDYPSSRHTGLVSGLRKFTWYYGSTLCFTTPGDGPCSAPTLLQ
THEDTPGHVRYLSFTEILDTSLRVIWAEPQDKNGIITGYMLWWEVPSVRSSRLERSLSNS
TLEYQLTDLTSTTAYTIQVAALTGAGQGVVTSSTVSTGVPPELPGAPSNLVISNISPRTA
TLRFCPGSDGKTIISRWIVEGQVVKEDGREEAWRVIYQKDNKPNADTLEIPSLTPFTQYR
FRMQQVNIVGSSPMSAPSRLIQTLQAAPDTYPSNLSLVSVTQTSLHFNWKPLPQSEYNSS
PETVGYRIRVWRTDGDGEDRIEDIKGGVGTTEDTIEGLSPWTHYQVQIQGSNSIGPGPWS
QTVAARTAEAAPSKSPENVTAEAVSSSRIMLTWSALPEAQRNGVIIGYKVLYCEKDSDTP
PSVQVVQGDRNLTLLLGSLQKYKMYALQVLAFTQVGDGPPSSPVLLRTKEDVPGPPVRMM
FPEVRLTSVRVVWQPPAFPNGIILGYQISYCLYSRDPLRWTTVEVGSNARQFTVTGLSSE
HTYVFCLTARTAVGWGEQQEALVVTTERRERPQPPRKLSVPQDEVEARRLHVYWVTGGSG
SSPLRYFTLQLKELPSGPWKTHTADIPHNVTSWTVDRLKPFTSYKIRMLATNDVGDSVLS
KETEAVTTLQDVPNEPPVILSVKPTTTTSVMVQWKSPSEDSINGVLTGYRLYYRELPANE
STVSDDRVQTTKNHSTSALITAKSTFKTVSSASLTEFELTQLKKFRHYHIVMTSYNIIGE
SQPSAPVEVSVGEAAPSVAPQSIKVSAVSPSTLEVTWDMPPLETQNGLIQGYKIHYWERD
NQNQTEKMKVIFVPNTRVHLTNLTSYTPYMVTLTAFNTAGDGPPSDPRGTRTLQSAPSQP
SYLTFSEVTEGSVNVSWGAPLTPNGQVEGYRVIYQPTAPVQGVSKVVTVDVKGSWQRWLK
VRDLIKGATYMFGVQALTVSYGSAVKANITAQPVKGSPGPPVEMSITKTSSALTIHWSEG
DMGATPVTGYVVEARPSDEGVWDSFIRLLPPASRSISVPLEHLRSGVSYEFRVIAVNRYG
YGQPSAPSVALAALSERPFYEEWWFLLVMALVGLILILVLVFTLLLHGHSTKYKACGTGK
HITPGEESVTLDNGGFTSLELNSRTLNTKNSFLKKNGTRSPPRPSPGGLHYSDEDICNNY
NGAVLTESTTLTEKPTEVSESELTDSDYEDEQPKHSFVNHYMSDPTYYNSWKRQPKGLKG
TGSPFAYEECATADTEPYYQTVVTQHSTGGAYTPTGQPAHTHINPSANPPGSRTPVTGFS
SFV
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgggaggtatccgtgagagatcccggaatgggaatcggcctcttttcctgatg
atccttctcgcctgcagctgccacatgttgcacggccaagaagttgctccctacttgcaa
ggaggagaacgggggcagcaggtggtgctggagggaaacaggctggtgctgacctgccca
gctggaggcagctggcctttgcagtaccgctggaccctgaacaacactaacatcacagac
tggacaccacaatacaggttgtctgtgccatctctgcagagggctgatgctggcttgtat
cagtgcatggtgaggaacaggatgggggctgtaatacacaggagaacagaggtacacgtt
gcttttctgggaaatttcacttctggggaggagaggaagacagcgactcagggccgagcc
gtcattatcagcccacctccgctggcttcgtttccccaacccctggtcacatggtacaaa
gacggacataagatcatccccaacaaccgattagccatcactttggataatcagctagtt
gtcctggtaaccactgcggcggatgcaggacgttaccatgtagaggcggtgaacgagatg
acaggagagattgtgataagccctgctgtctacctcagcatctcagttggcaagaaaaac
cgttggtcaacagatcctgggtcagagcttgtagctccagatattgtgattggacctaaa
aacacaacagttgttttggggaaggaggctacgctggagtgcattgccaatgccagacca
gttgatggccttgcggtgttatggaaacgtgatggacatcgactggccagtgggcgtcgg
cttattgttcctactgccacctcctctgatgcagggttgtatgtttgtgaagtgttggtt
agcaacagcactatcaaacccatggaggcaaggggatacctgactgtaatggagccacct
tcgctgactgttcaacccaaaaggaaaatctttgccgatctcgacagaaatatagaaatc
ccctgcaaggcttcaggcgtgccgcagccaaggatcgagtggtataaggacacagtgcct
ctttccaaactggccaacgctcgctacaaggtcagctcggccgctgggctgacggtacgc
aaggtccagccaggagacggaggaatattccagtgcttcgctcgcagcccagcaggagag
attcaagctcacactgagctccttgtttccagtgtggctcccacacttctgtcccctcct
tttgaccagacagtaactgatggtgacatggctttgtttacctgtcagaacagtggagct
ccaaaacctgccgtcacctggagaaaaggatcacagatcatagccagcggctcggttcag
gttcccaggttcacgctgctgcagtcaggcagtttgcagattcagccggtcagcatccag
gattcaggagaattcacctgcatcgtgtccaactctgagggaaccatcaacaccacggct
gcactcactgtgtggagtcgtacagttatttctgtgcctccagaggaccagcgtgtaatc
aaaggaaccacagctattctggcctgtaatgcgacacatgaccccagagttaatatcagc
tttaagtggtaccgtggcggcgtgacggtgctgccgagcagcggtggccgtgtttctgtg
cagccaggttctttgactattagccagacgtggtcaggtgacattggggactatatttgc
agcgtgatgtcacaagcaggcaacgactcccagtctgcacgcctcgaagtcattgagcta
ccacactcgccccgctccctaacggctcgtctcaatgactcagactcccgctctgtccgc
ctgtcctggctgcggccctttgatggaaactcccctcttctctactacatcttggagctc
tcagagaacaattctccatggaaggtctacctatctgaggtggatcctgcagtgagcgag
gtatcagtgggcggactcacacctgcaagaacctaccagttcagactctgtgctgtcaat
caagtgggaaggggtcaatacagtgctgaaacacagaggatgatgcttcgagaagaggcg
ccgagtgctccccctaataacattgtggccagcggtcgcacaaaccagtccattatggtc
cagtggcagcctcctccagaatccgagcttaacggtatcctccgaggatatgtcctaagg
taccgtctggctgggttgccgggagactaccaagagaagaacattagcagcccagagact
aactactgtctgctgaaggacctcatcatctggactcagtaccagatccaggtggccgcc
tacacaggagccggcctgggcgtctacagtcggcctgtcacagagtacacgctgcaggga
gttcccacagcacctccacaggaagtggaagttgtagctattaattcaaccaccatccgt
ttcacatggaaccctccacctcagcagttcattaatggtatcaaccagggttacaagctc
ctggtctggccggaacaatctcctgaggaggttagagtggtaaccatcactcctgactac
cctagctcccggcacacaggattagtcagcggtctcaggaagttcacctggtactacggt
tccactctctgcttcaccacacctggagacggcccctgcagcgcacccacccttctgcag
acacacgaggacacacctggacatgttcgctacctgagcttcactgagatcctcgacaca
tcccttcgagtcatctgggctgagccacaggacaagaatggcatcatcactggttacatg
ctgtggtgggaggtgcctagtgtgaggtcaagccgattggagcgctccttgtccaactcc
accctggagtaccagctgacagacctcacctccaccactgcctacaccattcaggtagca
gcactgacgggtgcaggacagggcgtggtcacgtcttccaccgtgtccaccggcgtccca
ccagagcttcctggggctccctccaacctcgtcatctctaacatcagtcctcgaacagcg
acgctcaggttctgccctggttctgatggcaaaaccatcatatccagatggattgttgaa
ggacaggtggtgaaggaggatgggagggaggaggcatggagagtcatttaccagaaagac
aacaagccgaatgcagacaccctggagatccccagcctcactcccttcactcagtacagg
tttaggatgcagcaggtgaacatcgttggttccagtccaatgagcgccccctctaggctg
attcaaacactacaggctgcccctgacacctacccctccaacctcagcctcgtgtctgtg
acacagaccagtctacattttaactggaagcctcttccacagtcagagtacaacagcagc
ccagagactgtgggctaccggatccgtgtttggaggacagatggagatggggaggacaga
attgaggacataaagggtggagttggaaccactgaagacacaatagaggggctaagtccc
tggacccactaccaggttcagatccagggctcgaactccataggaccaggaccatggagc
caaacagtcgcagcacgcaccgccgaggctgctccgtctaaatctccagaaaatgtaact
gctgaggcagtgagttcctccaggatcatgctcacctggtctgctcttcctgaggcacaa
aggaacggagtcattattgggtataaggtgttgtactgtgagaaagactcagacactccc
cctagtgttcaggtggtacaaggagacagaaatctaacactgcttctgggttccctccaa
aaatataaaatgtatgcactgcaagtgctggcgttcacacaggttggcgacggccctccc
agtagccctgtcctcctcagaaccaaagaagacgtcccaggtcccccagtccgtatgatg
tttccagaggttcgactgacatcggttcgggtggtctggcagcctcctgcgtttcccaac
ggcatcattttaggctaccaaatatcatactgcctttacagcagggaccctctgcggtgg
actactgtggaagtgggctccaatgctcgccagttcactgtcacaggtctctcctctgaa
cacacctacgtgttttgcctcacagctcgcactgccgtgggctggggcgagcagcaggag
gctctggtagttaccactgaacgcagagagcgcccccaaccacccaggaagctttctgtt
cctcaggatgaggtggaggctcgccgactccatgtctactgggtaactggtggctcgggc
tcctctcctctgaggtacttcactttgcagctgaaggagttgccgagcgggccctggaag
acccacacagctgacatcccacacaatgtgacctcctggacagtcgacaggctgaagccc
ttcacatcatacaagattcgaatgctggccaccaatgacgtaggagatagtgtcctcagc
aaggagacagaggctgttactactctacaggacgttcctaatgagccgccagtgatcctc
tcagtgaaaccaacaactactacctcagtaatggtgcagtggaagagccccagtgaagac
agtattaatggagtcctgactggatacaggctgtattacagggagctacctgcaaatgaa
tccactgtcagtgatgaccgagtccagacaaccaaaaaccatagcacaagtgccctcatt
acagccaagagcacattcaagacagtcagcagtgcctcactcacagagtttgagttgaca
caactaaagaagttcagacattatcatattgtgatgacgagctacaacatcatcggtgag
agccagccatccgctccggttgaggtgtctgttggagaggcagctccttcggtggcgcct
cagtcgatcaaggtgtcagccgtgtctccctccaccctggaagtgacctgggacatgccg
cccctggagacccagaatggactcatccaaggctacaagattcactactgggaaagagac
aaccagaaccagactgagaagatgaaggtgatttttgtccctaatacccgggttcacctc
acaaacctgaccagctacacaccatatatggtcacactgactgcctttaacactgctggg
gatggacctcccagtgacccccgtgggacccggactctgcagtctgcgcccagccagccg
agctacctgaccttctctgaagtgacggaggggagcgtcaacgtgtcctggggagctcca
ctcactcccaatggacaagtggaaggctaccgggtcatctatcagcccaccgctcctgta
caaggagtgagtaaagtggtgacagttgatgtgaaagggagctggcagcgatggctaaaa
gttcgagacctgatcaaaggagcaacgtatatgtttggggttcaagctctcacagtcagc
tacggatcagcagtgaaagcaaacatcacagctcaacctgtgaaagggtcccctgggccg
ccggtggaaatgtccatcaccaagacatcctctgccctcactatccactggtcagaggga
gacatgggtgcaactcctgttactggttacgttgtggaggcgcgtccctcagacgaggga
gtctgggattccttcatccgactcctccctccagccagcaggtccatctccgttccactg
gagcatctgaggtcaggggtcagctatgagttcagagtcattgctgtgaatcgctatggt
tatggacagccaagcgcaccctctgtggctcttgctgcgctgtcggagcgtcctttttat
gaagagtggtggttcctgctggtgatggctctggtgggcctcatcctcatcctggtcctg
gtctttactctgctcttgcatggacacagcaccaagtacaaggcctgtggtacaggaaag
cacattactccaggggaggagtctgtaaccctcgacaacggtggttttacttctctggag
ctaaacagcagaacactcaacaccaagaactccttcctcaaaaagaatgggaccagatct
ccacccaggcccagtccaggtggactccactattctgatgaagatatctgtaacaactat
aacggagccgtgctcactgaaagcaccacactcacagagaaacccactgaggtctctgaa
tcagagctaacggacagcgactacgaggatgaacagcctaagcactcttttgtcaaccac
tacatgagtgaccccacctactacaactcctggaagcggcagcccaagggcctcaaaggg
acagggagtccttttgcctacgaggagtgtgccaccgctgacacggagccctactatcag
acagtggtgacgcagcacagcacagggggagcttacacacccacagggcagcccgcgcac
acacacatcaaccccagcgccaacccgccagggtcacgcactcctgtgaccgggttttct
tccttcgtttga
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