Xiphophorus hellerii (green swordtail): 116720734 Help Entry 116720734         CDS       T07363                                  Symbol palb2 Name (RefSeq) partner and localizer of BRCA2   KO K10897   partner and localizer of BRCA2 Organism xhe  Xiphophorus hellerii (green swordtail) Pathway xhe03440   Homologous recombination xhe03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:xhe00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     116720734 (palb2)    03460 Fanconi anemia pathway     116720734 (palb2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:xhe03400]     116720734 (palb2) DNA repair and recombination proteins [BR:xhe03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     BRCA complex      116720734 (palb2)    FA (Fanconi anemia) pathway     Downstream FA components      116720734 (palb2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PALB2_WD40 Motif Other DBs NCBI-GeneID:  116720734 NCBI-ProteinID:  XP_032420021 LinkDB All DBs Position 5:complement(31765916..31777080) Genome browser AA seq 1350 aa AA seqDB search MDGNIGNILHSEEQLRNTLQCDDKEKLRRKLAHLQREYLKTAQRLKRAECVDALKRHVKN RISLQKDQDKNDPEITSTACVTPSSFTFNTNNATPGSLQCQGAVESSTIRSQQVIRFSLS GDLISSKTPDLSSDIAGSHRPSTALRLRSRRSRLRWEKRSANAPEGSDNSQRQQELTGNT RPGDEEQTIRDKDVFIESQELFSDPESESPSLLLTHWSTQEHTKTGDKTGNGNQRSQEET GKKIGPEVDGKCGRPALTTESKGQNAGENSLINNTMGEDGVSHSQARKPVVCEEGNHDGA QMTAIEKHEDSVEIKEKNNRITADENTVSLLDSCTLVEGLPFPVEYYIRTTRHMTLSQTQ PDMQAVIMSQLRAGRQRRSRGRSRRTNQGLQRSDRHTQTDSASSTTPSTSVDSLKPSNVN ASKDYSQSSSDFSTSAISEAPVSLRGSSVRPPKGTRTGRGRGRPPRQQLLKQGYSLTSGG LQPSLSSAPSTQLLHQAEETNTESMLLQQTPTHSCPAQPSSSVSETPSGFTDEHQEKIYP IFLKSSTSRPQQMNTGSSDCQALLLPSSSSSSSSSSSQTTQLSLPSLISRLKSLEIQQDF HLPDDQFASLKLHKLRQVAVESTPSHNTRTRSSCRHSAVDLPMPCSFPLSSTSTIRNSLR PNKSERTSPQQTQCTVTDNLTGTRLNEELCNSSIPETNAELSADALNTSTEAVSLVQEFT EGLEAGTENGAALSSTCTSINTDEPQALVDRTPRKENDVQLSDEPEVEQSENEKQPSLEE LGLTDGRITQLLSFDFSESKAAEEAPTSCTNDAEATPPVNNPNPQYPAEDFAEPTKADSS EDGAIKSNASQFLFKSPLDAVGCPCTGLPSIYHPSPTLASSPVLPSLGITPNAARLPSDS SPSAPPLCLPPSPSLSTQDLSPLDLWAGASTTSLPSNLPPPSLCSQLQDLSEPVAPRDQG DREEPDDCPAPSRIQLQGSAVEVGITTHGPALKFLLRCTHTLEAPAGGSLVDVCCVSDPS AGVCVAAAGKWAVCLWSQTSECNWSLKHTWTFSEPVINVFPVPDSTGLMFVSLGQLEIRQ LRLLSCCSLRQMLILEDIIQAVAGLFNSRVVTSSDSAAGSTLQVFTLSDSTSLLTPQPLV SPGVCVSALAPVEGLPDALIGTDEVGHLFIWNLKSGQLLSRVLLEDSLSNTACLKGYSYC GVLLVLLQHQFLSSLDQEEKKAREKCLLSEARSKPALFSLVGINPLSGRSVLSTWLYPPD GWTGRLCEVDVNRCSVVGLSQSGCVCVWELREGGTSQMMEAQEDGYWQLARWGHEDTLVI GHQNGDVSLHPYGVRPTKKGAKAEAETPPL NT seq 4053 nt NT seq  +upstreamnt  +downstreamnt atggatggcaatattggtaacattctgcacagtgaggaacagctgaggaacacactgcaa tgtgatgacaaggaaaagcttcgtagaaaactggcacatttacaaagggagtatctcaag acagcccagagactaaagcgtgccgagtgtgtggatgctttgaagaggcatgtgaaaaac aggatttctctgcagaaagaccaagacaagaacgatccagagattacatctaccgcttgc gttaccccctcctcattcacatttaacacaaacaatgcaactccaggttcactacagtgt caaggtgcagtagaatccagtacaatcaggagtcaacaagtaatacgattctcgctttcc ggagatctgatttcctccaaaaccccagatctcagtagtgacatcgctggcagccacaga cctagcacggccttgcgcctgcggtcgagacgcagccgcttacgctgggaaaagaggagt gccaacgctcccgaaggctcagacaacagccagcgacagcaggagttgacaggaaacaca agacctggagatgaggagcagacgatcagagacaaagatgtcttcattgaaagtcaggag ctgttttctgatccagaatctgagtccccctctctgctactcacacattggagcacgcaa gaacacaccaagaccggagacaaaacaggaaacgggaatcaaagatcccaggaagaaaca gggaaaaaaattggtccagaagttgatggaaaatgcggaagacctgctttaacaacagag agtaaaggacaaaatgctggagaaaacagtttaataaataatacaatgggagaagatggt gtcagtcatagccaagcaagaaaaccagtggtatgtgaagagggcaaccatgatggagcc cagatgacagcaattgaaaaacatgaggactctgtagaaataaaagagaaaaataatcgg atcacagcagacgagaatactgtaagtctcctagactcttgcacattagtggaaggacta cctttccctgtagagtactacattagaaccacaaggcacatgacgctatcccagacccag ccagatatgcaggctgtcataatgtctcagctgagagctgggagacaacgcaggagtcga ggccgcagcaggaggacaaatcagggcctacagcggtcagaccggcacactcagacagat tcagcctcttccacaactccgtccacatctgtggactctctaaagccatccaacgttaac gcttccaaagattattcccagagttccagtgacttttctacctctgccatttcggaagct cctgtttcacttcggggctccagcgtccgtccacccaaagggacgaggacaggcagaggc aggggaagacctccgagacaacagcttcttaaacaaggatatagcctgacctcaggagga ctccagccctccctcagctctgcaccgtctacccagttactccatcaagccgaagagaca aacaccgagtcaatgttactccagcagactcccacccacagctgtccagcccaaccttct tcttcagtcagtgaaactccatctggttttactgatgaacaccaggagaaaatctatcct atctttctgaagagcagcaccagcagaccccaacagatgaacacaggctcatcagactgt caggctcttctcctgccctcctcctcctcctcctcctcttcatcatcgtctcagacaact cagctttctcttccctctttgatcagccgcctgaagagcctggaaatccagcaagatttt cacctccctgatgatcagtttgcctccttgaagctgcacaagctccgtcaggttgccgtg gaatcaaccccgtcacacaacacacgcacacgctccagctgccggcacagcgccgtcgat ctgccgatgccctgttccttcccgctcagttccacatctaccatcagaaattctctccgt ccaaacaagagcgagcgaacatctccacagcagacacaatgcacggttaccgataatttg acaggcacgcggttaaatgaagagctttgtaactcaagtattccagaaacgaatgcagag ctcagtgcagacgctctcaacacctcaacagaagctgtttcactggtgcaagagtttact gaagggcttgaagctggaactgaaaacggggcagccctcagcagtacatgtacatctata aacacagatgaaccacaggctctggtggaccgaacaccgcgcaaagaaaatgatgttcaa ctttcagatgagccagaagttgagcaatctgaaaatgaaaagcaaccctctttagaagag cttggactcacagacggacgcatcactcagttgctttcctttgatttctctgaaagtaaa gcagcagaggaggctccgaccagctgcactaacgacgctgaagcaaccccacctgtaaat aacccaaacccacagtatcctgcagaagattttgcagaacctactaaagcagactcttct gaggacggagcgattaaaagtaatgcctctcagttcttgtttaagtctcctctggatgca gtgggatgcccctgtacaggcctgccatccatctaccatccgtcacccactctagcttcc agtccggtcctgccctccctgggaatcacccctaatgctgctcgcctgccctctgactcc tctccctctgctcctcctctctgcctgcctccgtctcccagcctgtccacccaggatctg tctcctctggatctttgggctggtgcatccaccacctccctcccttccaaccttcctcct ccctctctctgcagtcagcttcaggatttatcagagcctgtagctccaagagatcagggt gacagagaagaacctgacgactgcccggctccatccaggatccaactgcaaggctcggct gtggaagtgggaataacgacgcacggacctgcactgaagttcttactgaggtgcacacac acattggaggcgccagcagggggctctttggtggatgtgtgctgtgtgtcggacccatcg gccggtgtgtgcgtcgcagcagcaggaaagtgggcagtgtgcctgtggagccagacttca gaatgtaactggagcctcaaacacacctggaccttcagtgagcctgtgataaacgtgttt cctgtcccagactccaccggcctcatgtttgtgtctcttggtcagctggaaataagacag ctgagactgctgtcctgttgcagcctcaggcagatgctgatacttgaggacatcatccag gcggtggctggcttattcaactccagagtggtcacatcctccgactcggccgcaggctcc actctgcaggtgtttaccctgtcagacagcaccagcttactgactcctcagcctcttgtg tctcctggtgtgtgtgtgagcgccctcgctccagtagaggggcttcctgatgctctcatc ggtacagatgaagtgggacaccttttcatctggaatttaaagagtggccagctgctgagc agagtgctgcttgaagacagtctatccaacacagcctgtctcaaaggttactcctactgt ggagtgttgttggtcctgctgcaacatcagtttctaagctctctggaccaagaagagaaa aaggcaagagagaaatgcttgctatcagaggcgaggtcgaagccagctctgttctcttta gtcggcatcaaccctctgagtggaagatctgtcttatccacttggctgtatcctccggat ggctggactggcaggctttgtgaagtggacgttaaccgctgcagcgtggtgggcctgagt cagagcggctgtgtctgtgtgtgggaactcagagaaggggggacgtcccaaatgatggag gctcaggaggacgggtactggcaactggctcgatgggggcacgaggacaccctggtgatc gggcatcagaacggagacgtctctttacatccgtacggcgtgaggccgactaagaaaggt gctaaagctgaggctgaaactccaccgttgtga

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