Xiphophorus hellerii (green swordtail): 116720848
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Entry
116720848 CDS
T07363
Name
(RefSeq) junction plakoglobin-like isoform X1
KO
K10056
junction plakoglobin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04382
Cornified envelope formation
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116720848
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116720848
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116720848
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116720848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Cnd1
HEAT
HEAT_2
ELMO_ARM
KAP
Adaptin_N
ARMC9_ARM
Atx10homo_assoc
ARM_LIN_2nd
Arm_2
V-SNARE_C
Motif
Other DBs
NCBI-GeneID:
116720848
NCBI-ProteinID:
XP_032420196
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Position
5:22036342..22062165
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AA seq
721 aa
AA seq
DB search
MEMHMSEMDSGMVKVKEWNQSYYGHDSGIQSGATTIRDDDGDYKTTTRYVTTTTVTKEQP
DLETQYTLSRAQRVRAAMFPESMEESTTILSTQTDPSQMTNVQRLAEPSQMLKQAIIHLI
NYQDDAELATRAIPELTKLLNDEDQVVVSKAAQIVNQLTHKEASRRALMQSPQMVAAVVR
ALQNSNNMETTKAAASILHNLSHQREGLLAIFKSGGIPALVRMLSSPLESVLFYAITTLH
NLLLHQEGAKMAVRLADGLQRMVPLLKKTNPKFLAITTDCLQLLSYGNQESKLIILANGG
PEGLVQIMKTYNYEKLLWTTSRVLKVLSVCPSNKPAIVEAGGMQALGKHLQGSSQRLVQN
CLWTLRNLSDAATKQEGVEPLLQTLVGLLSADDVNMLTCATGILSNLTCNNSNNKSLVTQ
HNGVESLIHAILRAGEKEDVSEPAVCALRHLTSRHQDAELAQHAVRNHYGIPAIVKLLNM
PYYWPVIKAAVGLLRNLALCPENQAPLRDANAVPRLVNLLLKAHQDNQKSGSSPQQAYQD
GVRMEEIVEGCTGALHILARDPINRSQIANLDTIPLFVQLLYSPVENVKRVAAGVLCELA
LDKQCAEAIDGEGASSPLMELLHSNNEGIATYAAAVLYRISEDKNADYKKRVSVELTHSL
FKHDPAAWESAHNTILEGGYQDEPDGYAPYAYQGEMPMDAYDGQMMGEDFQGMNYNRPFD
Y
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggagatgcacatgagcgagatggatagtggcatggtaaaggtcaaggagtggaatcag
tcatattacggtcacgactcgggcatccagtctggagccaccaccatcagagacgatgac
ggcgactacaaaaccaccacgcgttatgtcacaaccaccactgtcaccaaagagcagccc
gacttggagacccagtacacactgagcagagctcagcgtgttcgggctgcgatgttcccc
gagtcgatggaagaaagcaccaccatcctgtcgacccagacagacccgtcccagatgacc
aacgtccagcggctggccgagccctcccagatgctcaaacaggccatcatccatctgatc
aactaccaggacgatgccgagctggccaccagggccatcccggagctcaccaagctgctc
aacgatgaagatcaggtggtggtcagcaaggcggcacagattgtgaaccagctcacccat
aaggaggcctcccgccgcgccctgatgcagtcccctcagatggtggcggcggtggtccgg
gccttgcagaactcaaacaatatggaaaccaccaaggcggcagccagcatcctccacaac
ttgtcccaccagagggagggcctgcttgccatcttcaagtcaggaggcatccccgctctt
gtccgcatgctcagctctccgctagagtctgtgctgttctacgccatcaccacacttcac
aacctgctgctgcaccaggagggagccaagatggccgtgcgtctggccgacggactgcaa
aggatggtcccgctgctgaagaagaccaaccctaagttcctggccatcaccacagactgt
ctgcagctgctgtcatatggcaaccaggagagcaagctgatcattctcgccaacggaggt
cccgaaggtcttgttcaaatcatgaagacctacaactacgagaagttgctttggaccacg
agccgcgtcctcaaagtcctctctgtgtgccccagcaacaaaccagccattgttgaggct
ggtgggatgcaggctcttggtaaacacctgcaaggctccagccagcgtttggtgcagaac
tgcctgtggaccctcagaaacctgtccgatgctgcaacaaagcaggaaggagttgaaccc
ctgctgcagactctggtggggctcctcagcgcagacgacgtcaacatgctcacctgcgcc
actggcatcctgtccaacctcacgtgcaacaacagcaacaacaaatctctggtcacccaa
cacaacggtgtcgagtcgctgatccacgccatactgcgtgccggggagaaggaggatgtg
tctgagccggcggtttgcgccctgcgacatctgacttcacgccaccaggacgccgagttg
gcgcagcacgccgtgaggaaccactacggcatcccagctatcgtcaagctgctcaacatg
ccctactactggccagtcatcaaggctgctgttgggctgctccgcaacctggccttgtgc
ccagaaaaccaggctcccctcagagatgcaaacgccgtcccccgtctggtcaacctgctg
ctcaaggcccaccaggacaatcagaaatctggttcatcccctcagcaggcttaccaggat
ggagtgaggatggaggagattgtggagggttgcacaggagccttgcacatcctggcaaga
gatcccataaatagaagtcaaattgccaacttggacacaattccactctttgtccagctc
ctctactccccggtggagaacgtgaagcgtgtggcggcaggcgttctgtgtgagctggcc
ctggacaaacagtgtgctgaagctattgatggagagggagcttcatctccactgatggag
ctactgcactctaacaatgagggcattgctacctacgctgctgctgttctctaccgcatt
tccgaagataagaacgccgactacaagaagcgtgtctccgtggagctcacacactctctg
ttcaagcacgaccctgcagcctgggagtcggcccacaacactatcctggaaggaggctat
caagatgaaccagacggttacgcaccctatgcataccaaggtgaaatgccaatggatgcc
tatgacggacaaatgatgggggaagactttcaaggaatgaactacaacagaccctttgat
tattaa
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