Xiphophorus hellerii (green swordtail): 116720926
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Entry
116720926 CDS
T07363
Name
(RefSeq) laminin subunit gamma-2-like
KO
K06246
laminin, gamma 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04382
Cornified envelope formation
xhe04510
Focal adhesion
xhe04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116720926
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116720926
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116720926
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_B
EGF_LMN_ATRN
ATG17_like
EGF_Teneurin
DUF1664
Baculo_PEP_C
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
116720926
NCBI-ProteinID:
XP_032420286
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All DBs
Position
6:complement(29849776..29865279)
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AA seq
1127 aa
AA seq
DB search
MESCWVLLCVVLAALGSVQTTYTSYSDSRCECGGRARRCLRDAWGLRCLDCQGNTEGRHC
ERCKDGFYQQGAQLSCTPCSCNPTGSVSNTCDSRGRCSCKEGVSGDKCDLCPDGPMGAEG
CRKRRQDREDSGSLTLPCFCYGHSARCSAQPGFSVHNVSSTFSSGPDGWKAATAQRTTPR
DVLFRWSPRHQDLEVVSKQSLPTYLYAPDVYLGNKLLSYGQNLSFSLRLDRGVRHPSTSD
VVLEGGGLTVAAALGDLRAVVPCGKKISYTFRLDEKLSNKWKPQLSSFEFQKLLQNLTAI
KIRATFGEDGRGYLDNVNLVSARRGDGVAAGWVQTCTCPPGYEGDFCERCSVGFRRRAPS
SGAFSACEPCSCRGGSCDPQTGDCYSADETPGERSCSEGFYRDPRQQGTCERCPCPERSS
CFLEAGALEPQCLRCPQGTFGFYCDTCREGFYGDPTGLRGAQRPCRPCSCNGHIDVSAAG
SCDRNSGECLKCLNNTTGRFCESCLPGFYRNPSTSACKPCSCDLLGSEDGQCDAAGRCRC
RAGFQGPRCDRPNCPTCFSPIKKKMELYSIRLKELEFLLSAPGRVPTNRAEMEATLRAME
DLMQNLQQSAERLTDQEKRLQTRLSSISGRQLTEEQEIQNISETVKRIGQQQRTFKSKVE
EVEALIPAMKNLLKEAKTKIQSVELPVRDDPLTSGSLSSLVQQVTGLADEHKTTAGSVER
TANQALNDSKQSLDLIRTLMNKENKVKELIGDLQSLYDKTSADVKSLEKRAGSLSEDAKQ
ESKMADGMLKDISRLEKNLPPSMKDAVDAMATRLDALKEAAQKNMSAVDDLLGAVEEDRT
DAEELLDQGQTAQQEFNKLLDRVRTAKAETEKALQGVGTNKDLDDTLNTLRGFDQQIGDS
KAESDEAVKRLPNINSTIQEAVGKNGEAQSVLDAASKDHDEAMGNINTLDDLAKNLQNTA
GSLPSADGLVSEADKLNQEAKDLKAGAEQTAAGLKVGLKEAKELAAGAEEAAAGATAALA
NAKQSKDAVQETLRSVSDMLANLNSGDVVDEEQLRKLEAALGRAEAEVEARLRPRLEEAE
DQEEAHRRRLTAINTDIDSILRDIANLEDIRNSIPAGCYNTPPIEEP
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggagagctgctgggttttactctgcgtggttctggctgctctgggctcggtccagacc
acctacacctcctactcggactcccgctgtgagtgcggcggccgggcgcggcgctgcctg
cgggacgcctggggtctgcgctgcctggactgtcagggaaacaccgagggtcgacactgc
gagcgctgcaaggacggattctaccagcagggggcgcagctgagctgcacgccctgcagc
tgcaaccctacaggttctgttagcaacacgtgtgacagcagggggcgctgcagctgtaag
gaaggcgtctctggagacaaatgtgacctttgccccgacggcccgatgggagcggagggc
tgcaggaagaggcgccaggacagagaggattctgggagtttgactctgccgtgtttctgt
tacggacacagtgcgcggtgttctgctcagcctggtttctccgtccacaacgtttcctcc
accttcagctcaggtccggacggctggaaggcggcgacggcccagcgtacgactcctcgg
gacgttctgttccgctggtcgcccagacaccaggacctggaggtggtctccaagcaaagc
ctgcccacttacctgtacgcaccagacgtttacctggggaacaagctgctgagttacggc
cagaacctttccttctcgctgcgtttggaccgcggcgttcgccacccgtccaccagcgac
gtcgtgctggagggcggcggcctgacggtggcggcggcgctgggggacctgagggccgtg
gtcccctgtgggaagaagatcagctacaccttcaggctggacgagaagctcagcaacaag
tggaaacctcaactttcctcattcgagttccagaagcttctccagaacctgacggccata
aagatccgggccacgttcggagaagacggacgcggttaccttgacaacgtgaacctggtt
tcggctcgccgtggggacggcgtcgcggccggctgggtccagacctgcacatgtccacca
ggatatgagggcgacttctgtgagcgctgctcagtcgggttcaggcgccgggcgccgtca
tccggggccttcagcgcctgcgagccgtgcagctgcaggggcggcagctgcgacccccag
accggagactgctactccgccgacgagacgcccggcgagcggagctgctccgaggggttc
tacagagacccgcggcagcaggggacctgtgagcgctgcccctgtccggagaggtcatcc
tgctttctggaggccggagctctggagcctcagtgcctccgctgtccgcagggaaccttt
gggttttactgcgacacctgtcgggagggtttctatggcgaccccacaggtctgcgaggc
gcgcagcgaccctgcagaccctgcagctgcaacggtcacattgacgtcagcgcggcggga
agctgcgaccgcaacagcggagaatgcctgaagtgtctgaacaacacgaccggtcggttc
tgtgagagctgcctgcccgggttctaccgcaacccgtccaccagcgcctgcaaaccctgc
agctgtgacctcctgggctcagaggacggccagtgcgacgcggccggccggtgccggtgc
cgagcgggcttccagggtccgaggtgtgaccggcccaactgccccacctgcttcagcccc
atcaagaagaagatggagctttactccatcagactgaaggagctggagttcttgttgtct
gcgccgggtcgggttccgaccaaccgggctgagatggaggcgactctgagagccatggag
gatctgatgcagaacctgcagcagagcgccgagcggctgacggatcaggagaagaggctg
cagactcgcctgtcgtccatcagcggccgtcagctcactgaagaacaggagatccagaac
atctcagagacggtcaaacgcatcggccagcagcagcgcaccttcaagtccaaggtggag
gaggtggaggcgctgatccctgccatgaaaaacctcctgaaggaggcaaaaaccaaaatc
cagtccgtggaacttcctgtccgcgatgatccgctgacttcaggctcgctgtcctctctg
gtgcagcaggtgacaggcctggctgatgaacacaaaacgacggcgggttctgtggagcgg
acggccaaccaggctctgaacgactccaagcagagtctggatctgatccggactctgatg
aacaaggagaacaaagtcaaggagctgattggagatctgcagagtctatacgataaaacc
tcagcagatgtgaagagtttggagaagcgagcaggaagtctgagcgaagacgccaaacag
gagagcaagatggccgacggcatgctgaaagacatttccaggctggagaagaacctccca
ccgtctatgaaggatgctgtggacgccatggcaaccaggctggacgccctgaaggaggcg
gcgcagaagaacatgtccgccgtggacgatctgctgggcgctgtggaggaagaccggacc
gacgccgaggagctgctggatcagggacaaaccgcccagcaggagttcaacaagctgctg
gaccgggtccgcaccgctaaagctgaaaccgagaaggctctgcaaggcgtcggtaccaac
aaagacctggacgacaccctgaacaccctgagaggtttcgaccagcagatcggcgacagc
aaagctgaatccgacgaagccgtcaagcgtcttccgaacatcaacagcaccatccaggaa
gctgtgggtaaaaacggcgaggcccagtcggttctggacgcggcgtccaaagatcacgac
gaggcgatgggaaacatcaatacgctggacgacttggctaaaaacctccagaacacggcc
gggtcgctgccgagtgctgacggtttggtgagcgaagccgacaaactgaaccaggaggcc
aaggacctgaaggccggagcggagcagacggcagccggtctgaaggtcgggctgaaggag
gccaaggagctggctgctggagcggaggaggcggctgccggagccaccgcggcgctcgcc
aacgccaagcagagcaaagacgccgttcaggaaacactgagatccgtcagcgacatgctg
gccaacctgaactccggagacgttgtggacgaggagcagctgaggaagctggaggcggct
ctgggccgggcggaggcggaggtggaggcccgcctgcggccgcggctggaggaggcggag
gaccaggaggaggcgcatcgccgccgcctcaccgccatcaacacggacatcgacagcatc
ctgagggacatcgccaacctggaggacatccggaacagcatccctgctggctgctacaac
accccgcccatcgaggagccctga
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