Xiphophorus hellerii (green swordtail): 116720978
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Entry
116720978 CDS
T07363
Symbol
retreg1
Name
(RefSeq) reticulophagy regulator 1
KO
K23880
reticulophagy regulator
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116720978 (retreg1)
Membrane trafficking [BR:
xhe04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
116720978 (retreg1)
ER-phagy
ER-phagy recepters
116720978 (retreg1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_RETREG1-3
Reticulon
Motif
Other DBs
NCBI-GeneID:
116720978
NCBI-ProteinID:
XP_032420415
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All DBs
Position
6:28436640..28457929
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AA seq
458 aa
AA seq
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MLGSREAGAAGGQEEAPGSVGPSGPLNPEHRGQERPPGRAGWRVSGLVSWRQHRVRTSAL
FAAANAVIWFVAFSSFRIYSLISILLVLLVVTVTARDAVWTRTKGAHVWRRVTSSWEIID
SGQDSRSRTGPQLGDSLRLFIQEMSAFKQQNPGKFCLLVCSLCTFFAVLGRYVPGIVISY
IILLGIFLWPLISSQDKSLWLKPVLQKLDFGIGQFFNKIKQNREKRLVQAEMEREGVESD
LSSMFPKLDSTVCKDMSVSDTEVSDVTWTDNGTFNLSEGHTPQTENSEELDKEELFTAGL
PDFPSLDNGTTTNGDDDLSLDLSLPPPQQIKSKRLPPPSHEGQPGDSALELVNQLAGNVI
AAAVTSAIQERIEAAVGCLALSEDPKRSRPPDSSRLLDLAEESDSEVEDFELLDQSELEQ
LEGELGLVEEKTKPKEEEPAKTDKPASSGFFSKLLRRH
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcagccgggaagcaggcgccgctggcggacaggaagaggcccccgggtcggtg
ggtccctcggggcccctgaacccggagcaccgcgggcaggagaggcctcccggccgggca
gggtggcgtgtcagcgggctggtcagctggaggcagcatcgggtcaggacgtcagccctg
tttgctgcagccaacgcggtgatctggtttgttgccttcagttcttttcggatctacagc
cttatttccatcctgttggttctgttggtcgtcacggtaaccgcaagagacgctgtttgg
accaggaccaaaggagctcatgtgtggcgcagagtgaccagcagttgggagatcattgat
tctgggcaggacagccggtccagaaccgggcctcagctcggtgactccctgagacttttc
atccaggagatgtcggcgttcaaacagcaaaaccctggcaagttctgcctgctggtttgc
agcctctgcaccttcttcgctgtgttgggtcgctacgttccaggaatcgttatttcctat
atcatattgctaggtattttcctgtggcctttgatttcatctcaagacaaaagtttgtgg
ctgaagccagttctgcagaagctggacttcggcatcgggcaattttttaataaaatcaag
cagaaccgtgagaagagactcgttcaggctgagatggagagagaaggcgtcgaatccgac
ctttcttcaatgtttcccaagctcgactccacggtgtgtaaagacatgtcggtgtcagat
actgaagtgtctgacgtgacctggacggataacggcaccttcaacctgtcagagggacac
actccgcagacggagaactcggaagaacttgataaagaggaattgttcactgctggtctc
ccagattttccttcccttgataacggcacaacaaccaacggtgacgacgacctcagtctt
gacctttccttacctccgcctcaacaaatcaaatcaaagcgattgcctcctccgtcacac
gaaggccaaccgggcgacagcgccctggaactggtcaaccagctggccggcaacgtcatc
gccgccgccgttacgtccgccatccaggagaggatagaggccgcagtcggctgcttggct
ctgagcgaagaccccaagaggtcaaggcctccggattcgagccggctgctggacctggcc
gaggagtctgacagcgaggtggaggactttgagctgctggaccagtctgagctggagcaa
ctggaaggggagctggggttggtagaggagaagacgaaacccaaagaggaggaaccggcc
aagaccgacaaaccagcctcgtctggattcttctctaaactcctcagacgccactga
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