Xiphophorus hellerii (green swordtail): 116721066
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Entry
116721066 CDS
T07363
Symbol
ski
Name
(RefSeq) ski oncogene
KO
K26503
Ski oncogene
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116721066 (ski)
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Gene cluster
GFIT
Motif
Pfam:
Ski_Sno_DHD
c-SKI_SMAD_bind
SlyX
MgtC_SapB_C
Motif
Other DBs
NCBI-GeneID:
116721066
NCBI-ProteinID:
XP_032420507
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All DBs
Position
1:6390674..6461779
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AA seq
718 aa
AA seq
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METVSRQSFQPHPGLQQTLKQFHLSAINSLGGPAAFSARWQHELLFKKDGKEPEPVLQHL
PPPVMPGPLFIPSDRSTERCETVLEGETISCFVVGGEKRLCLPQILNTVLRDFSLQQINS
VCDELHIYCSRCTADQLEILKVMGILPFSAPSCGLITKTDAERLCNALIYGGAYPPRCKK
DPGSGSLELQLTDRSFKIYHECFGKCQGLFVPELYSSPNAACIQCMDCRLMYPTHKFVVH
SHKAQENRTCHWGFDSANWRAYILLGQDYTGKEEKARLELLLDEIKEKFDFANKYKRKAS
SRASDGIPVKKSKLEDVPSQSPLGDKEKQHDWLQSLSASNKGINCLQSRQRPSAFRPWSP
HISAGEKEPPPHPLALLRDSFYNYKSLENAVAPNVALTPLPLGKTGPTSPSAANTSQPSD
EGASHSSRPRKRRATEELPAPAPEGPCPPPATACRPPPQDDKDSEVEVEVESRDDFTSSM
SSLSSPSFTSSSSSAKDLSSPGTQGPLCTVTSTECSAPAAAPPAVTVAPSELGLESELES
LRQALDGGLDSKESKEKFLHEIVKMRVKQEEKLGSALQAKRSLQQELEFLRVAKKEKLRE
ATEAKRSLRKEIERLRAESEKKMKEANESRIRLKRELEQARQLRVCDKGCEAGRLRAKYS
AQIEDLQMKLQHAEADREQLRADLLQEREAREHLERVVKELQQQLWPKPGYKEAPPNK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggagactgtaagtcggcagagcttccagcctcacccgggactgcaacaaactctgaag
cagtttcacctcagcgccataaactccctgggcggaccggcggctttctcggctcggtgg
cagcatgagctcctcttcaagaaggacgggaaagagcccgagccggtcctgcagcatctg
ccgccgcccgtgatgccgggcccgctgttcatcccgtccgaccgctccacggagaggtgc
gagacggtgctggagggggagaccatctcgtgcttcgtggtcggcggggagaaacgcctg
tgcttgccgcagatcctcaacacggtgctccgggacttctccctgcagcagatcaactcg
gtgtgcgacgagctgcacatctactgctcccgctgcacggcggaccagctggagatcctc
aaagtcatgggcatcctgcccttctccgcgccgtcctgcggtctcatcacaaagacggac
gccgagcggctctgcaacgccctgatctatggaggagcatacccgccgcgatgcaagaag
gacccgggctccggctccctggagctgcagctcaccgatcggagcttcaagatctaccac
gagtgtttcggcaagtgccagggcttgttcgtaccggagctgtacagcagccccaacgca
gcgtgcatccagtgcatggactgcagactcatgtatccgacccacaagttcgtggtgcac
agccacaaggcgcaggagaacaggacttgccactggggcttcgactcggccaactggagg
gcgtacatcctcctgggtcaggattacacgggcaaagaggagaaggcgcgcctggagctg
ctgctggacgagatcaaggagaaatttgacttcgccaacaagtacaagaggaaagcatca
tccagggcgtctgatggcatccctgtgaaaaagtccaaactggaagacgtcccatcacag
tctccgcttggtgacaaagagaagcagcacgactggctgcagtccctgtctgcctcaaac
aaggggatcaactgcctgcagtccagacagagaccttcagctttcagaccatggtctcct
cacatctctgctggggagaaggaaccgcccccccaccctctggctctgctgagagacagc
ttctacaactacaagagcctcgagaatgctgtggcccccaacgtggccctcacgccactc
cctctggggaagacggggcccacatccccgtctgccgccaacacgtcccagccttcagat
gagggtgccagccacagctccagacctcgtaagagaagagctacggaggaactgccagct
ccggctccagagggcccctgccccccacctgccaccgcctgccggcccccgccgcaggat
gacaaggactctgaggtggaggtggaggtggagagccgtgacgacttcacgtcctccatg
tcctccctgtcctcgccgtccttcacctcatccagcagctcagccaaggacctgagctca
ccggggacccaagggccgctctgcaccgtcacgtcgacagaatgctccgcccctgccgcc
gcaccccccgctgtgaccgtggcaccttcggagctggggctggagtcagagctggagagc
ctcaggcaggcgctggacggcgggctggactccaaggagtcaaaggagaagttcctgcat
gagatcgtgaagatgagagtgaagcaggaggagaagctgggctcagccctgcaggccaag
cggagcctccagcaggagttggaattcctgcgggtggcgaagaaggagaagctccgagag
gcgaccgaggccaagcgcagcctgaggaaggaaattgagcgtctgcgagccgagagcgag
aagaagatgaaggaggcgaacgagtcgcggatccgactgaagagggagctggagcaggcg
cggcagctgagggtctgcgataaaggctgcgaggccggccgtctccgcgccaaatactcc
gcacagatcgaggacctccagatgaaactgcagcatgccgaggccgaccgcgagcagctc
agagccgacctgctgcaggagcgggaggccagggagcacctggagagggtggtaaaggag
ctccaacagcagctctggcccaaacctggctacaaagaagcgccccctaacaagtaa
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