Xiphophorus hellerii (green swordtail): 116721206
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Entry
116721206 CDS
T07363
Name
(RefSeq) hepatocyte nuclear factor 6-like
KO
K24171
one cut domain family member 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116721206
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
116721206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
HOCHOB
Motif
Other DBs
NCBI-GeneID:
116721206
NCBI-ProteinID:
XP_032420675
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Position
6:12490072..12504672
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AA seq
483 aa
AA seq
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MELTMDNLHSVSSHSQPGDLMNSPHARPSPSPSSTPRNLVSHAPGGRPSMVSGMASLLEG
SGGDYRTDPSALSGHLHSSISMCETGMSLSNTYTTLTPLQHLPPISTVADKFHHPHSHHH
PAAHQRLSAGNVSGSFTLMREDHRGLTSMGNLYSHYPKEMSVTGMGHGSLSPLSGGLGSL
HNSQQSLSAYGPNTHLSTDTKMLSPVSGFESHASMLSRSDQEHLARSLGGHGHGLISNLN
GMHHLPHSHLHSQANGAVMMADRERHGHVAGQGMSGSGIQAEEINTKEVAQRITAELKRY
SIPQAIFAQRILSRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLA
AACKRKEEDRGRERSQVPKKQRLVFTDLQRRTLVAIFRENRRPSKEMQLTISQQLGLELS
TVSNFFMNSRRRCPERWDAEEHCHGAHSHGHVHTPHGNSSGGGTNSASPIQPGTSSANTF
PKA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggagctcaccatggacaacttgcacagcgtctcgtcgcattcccaaccaggggacctc
atgaactctccgcacgctcggccgtctccgtccccgagctccacaccccggaacctggtc
tcgcacgctccgggtgggcgaccgagcatggtgtccggcatggcctcactgctcgaaggg
tccggcggggactaccggacggacccgtccgccttgtcgggacacctccattcgtccatc
agcatgtgtgagaccgggatgagccttagtaacacatacaccacgctgacccctctgcag
catctacctccgatatccaccgtggcggataagtttcaccacccgcactcgcaccaccac
cctgccgcccaccaacgactgtccgccgggaacgtcagcgggagcttcacgctgatgcgg
gaggaccaccgggggctgacgtccatgggcaacctgtacagtcactacccaaaagagatg
tccgtcactggcatgggtcatggatcgttgtctcccttgtccggcgggctcggttctctg
cacaactcccagcagtcgctctccgcctacggtcccaacacgcacctctccaccgacacc
aagatgctgtcgccggtgtcagggttcgagtctcacgcctccatgctgtctcgaagcgac
caggagcacctggccagaagtttaggtggacacggccacggcttgatctccaacctcaat
gggatgcaccacctcccgcacagccaccttcattcccaggcgaacggtgctgtgatgatg
gccgatcgggagaggcacggtcacgttgccggccagggaatgtcaggttcgggcatacag
gcggaggaaatcaacacgaaggaggtggctcaaaggataacggccgagttgaagcgttac
tctatcccgcaggctatttttgcccagcggatcttgagccggtcgcagggcaccctgtcg
gacctgctgcggaaccccaaaccgtggagtaagctcaagtcgggccgggagacgttcagg
aggatgtggaagtggctgcaggagcccgagtttcagcggatgtctgctctgcggctggcc
gcagcatgtaagcgcaaggaggaggaccggggacgggagcgcagccaggtgccaaagaag
cagcggctggtcttcacagacctgcagcgtcgcacccttgtggccatcttccgagagaac
cgccgcccctccaaggagatgcagctcaccatctctcagcagctgggcctggagctctcc
accgtctccaacttcttcatgaactcacgtcgccgctgtccggagcgctgggacgcagag
gagcactgtcatggcgcgcacagccacggccatgttcacactccccacggaaacagcagc
ggcggcggcaccaacagcgcgtccccgatccaaccgggcacctcgtctgcaaatacgttc
cccaaagcctga
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