Xiphophorus hellerii (green swordtail): 116721278
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Entry
116721278 CDS
T07363
Name
(RefSeq) inner ear-specific collagen-like
KO
K24214
otolin-1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116721278
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
C1q domain-containing proteins
Adiponectin / short collagen group proteins
116721278
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
116721278
NCBI-ProteinID:
XP_032420795
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Position
6:complement(14455939..14462594)
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AA seq
493 aa
AA seq
DB search
MPSADLILVTTVFMAFIITLTSGGRTTHWPKPQNTNKPPQTGTSGFGGGLRSGQIATKNP
SPSSSLHTEETTGFMTDGYSLSPTDSSIFNSEAYPTEYLTDAILPPGNAPGNYTFDYNEC
FFNVCECCPPEKGPEGPTGEKGSPGERGPPGLPGEKGEIGPPGSPGPAGLPGLSGLNGEK
GGKGDQGPNGLPGSPGVPGKPGEKGDLGFKGEKGENGINGLKGDAGEKGEPGHNGTVGTI
GPMGPPGTAGTKGQKGEQGRLGECLLGERGQKGDLGDPGPPGPIGEMGPQGANGSDGSKG
EMGPAGEKGDTGARGPPGARGVAGMKGERGVKGVRGPRGPKGDPGESLEPVRSAFSVGLF
PSRSFPPPGLPVKFDKVYYNEEGHWDPALNKFNVTHSGVYLLTYHITVRNRPLRVALVVN
GVRKVRTRDSLYGQDIDQASNLVLMQLSEGDQVWLETLRDWNGVYSSSEDDSTFSGFLIY
PNSTIKTSAMKKI
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgccatccgctgatctcatcctggtgaccaccgtctttatggccttcattattacgctc
acgtctggtggcaggaccacacactggcccaaacctcagaacaccaacaagcctcctcaa
actgggaccagtggtttcggtgggggattaaggtctggacagattgctacaaaaaaccca
tctccctccagcagcctgcacacagaagaaacaactgggtttatgacggatggatactcc
ctgtccccaacagacagcagcatcttcaacagtgaggcttacccaactgagtacctcact
gatgcaatcctcccccctggaaatgcccctggaaattatacatttgactacaatgaatgc
ttcttcaatgtttgtgagtgctgtccaccagagaaaggtcccgaaggtccgactggcgaa
aaggggtcaccgggggaaaggggccctccaggtttaccaggagaaaagggagaaattgga
cccccgggttctccgggaccagctgggttacctgggctcagtggattaaacggagagaaa
ggtggaaaaggagatcaagggccaaacggtttaccgggctcccctggagtccctgggaaa
cctggagaaaaaggtgatttgggcttcaaaggagagaaaggtgaaaatgggatcaatggg
ctgaaaggagacgcaggagaaaaaggagagcctggtcacaatggaactgtgggcaccatt
ggacctatgggtcctccagggacagctgggacaaagggtcagaaaggtgaacagggacgt
ttgggagaatgtctacttggtgagagagggcagaaaggtgatcttggtgatcctgggcct
cctggtccaataggtgagatgggtcctcaaggagcaaatggcagtgatggttcaaaaggc
gaaatggggccagcaggagagaagggagacactggcgcaagagggcctccaggtgcaagg
ggagtagcaggaatgaagggggagaggggagttaaaggtgtacggggccctcggggccca
aaaggcgatccaggtgagagtttggagccggttcgttctgctttcagtgtgggtttgttc
ccaagtcggtcctttcctccacctggactgcctgtgaagtttgataaggtctattacaat
gaggagggtcactgggacccggcactcaacaagttcaacgtcacacactcgggagtctac
ttactcacttatcacatcactgtgcgcaaccggcccctgcgggttgccttggtggttaat
ggggtgcggaaagtgaggacacgagattccctttacggccaggacatcgaccaggcttcc
aaccttgtcctgatgcagctcagcgagggagatcaggtgtggctggagaccctgagagac
tggaacggggtttactccagcagtgaggacgatagcaccttctctggcttcctgatttac
ccaaactcaactataaaaacaagcgctatgaaaaagatttga
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