Xiphophorus hellerii (green swordtail): 116721338
Help
Entry
116721338 CDS
T07363
Name
(RefSeq) receptor-type tyrosine-protein phosphatase S-like isoform X1
KO
K06778
receptor-type tyrosine-protein phosphatase S [EC:
3.1.3.48
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116721338
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116721338
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116721338
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
116721338
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
116721338
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
Type II RPTP family
116721338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
Tc-R-P
PTP-SAK
DSPc
fn3_2
Y_phosphatase3
PTPlike_phytase
V-set
Fn3_PTPRU
Ig_VEGFR-1-like_5th
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
116721338
NCBI-ProteinID:
XP_032420881
LinkDB
All DBs
Position
6:12021970..12122607
Genome browser
AA seq
1967 aa
AA seq
DB search
MPSCKPDGVLAQSRRTILGFCFFSSPLCLLLPLIILLTRPWDSLCEALAPPKFTKIPTDQ
IGVSGGVASFVCQATGNPKPVVYWNKKGKKVNSQRIEVTIEFDGGAGAVLRIQPLRAPRD
ENVYECVARNSQGNNTTTAKLDIIREDVLPSGFPSIDMGPQLKVVERTKTTTMLCAASGT
PDPDISWFKDFLPVDPSLSQGRIKKLRSGALQIENSEETDQGKYECVANNSQGVRYSSPA
NLYVRELREGASDTLRRVPPRFSISPNNHEIMPGGSVNITCVAVGSPMPYVKWMLGMEDL
TPEDEMPIGRNVLELNGVRESANYTCVAMSSLGIIEATAQVLVKTLPKPPGMPIVTETTA
TSVTITWDSGNPDPVSYYIIQYRAKGPDSKYETVDSITTTRYSIGGLYPNTEYEIRVSAF
NSIGQGPPSARVEARTGEQAPASPPRNVQAHVISENTVMVRWEEPEEPNGQVKGYRVYYT
MDPSRAINEWQIHNVQDSVITTIQNLVASETYTIQVLAFTSVGDGPFSDPVHVKVLRGVP
GQPGKFKVGKVTDTSIELTWEPAYTKEKIVNYELLYKPVKFGSLEKLTFGSRNSYTVEGL
KANTEYSFSLAAISNKGIGAFTNELVQRTSQAKPSAAPEGVSCESVSSTSLGVSWRPPQV
EAQNGELAGYELKYQRVSGTGEEEGGETQGFEVDGPPITAQQTQIVLEGLEKWSWYNITL
AASTAEGTGPRSPAVLCRTHEGVPGAAPRQVDVQPLNSSALRVTWRSVLPRLRQGQIRGY
QVHFSRTESGESRTLPRIKDLLLDESQMEEDDSTQYELVLGGLKAETLYSVSVAAYTTKG
DGAHSKAKLVQTTGIVPGSPSLWVRPGSGSSVVVRWSPPLECSETGSDGRVAPVEIQGYR
LQFGLKNTSLNGTVDFQPQERNFTVRNLSPGSSYIFVLSAKSRAGYGNATQQEIAVPMCP
PSGYPKIIDFVNATCCSLQFSWLPPSPDECSNAVTEYTVAYRKASNSGSSALPASSAPPW
LITLPASESSYTILGLNHSTAYEVQLRAHNQAGPGPFSPALLYLTLAFETDVPRNFSVNL
ATKTSVLLTWDFPETSNPYRFIVEYNRQKMEVDARLKKAVIPNLQPDTSYDFKITAPEGN
MGGLRHRITAKTSPPITIRRPEIDQSRRETEATVTIILPLLETRTPVKNIYVVVVPLRRA
RGVIRHLKSPDEMDLEELLKDISQRQRDSRQQKQVDLRRAYITARFTPETLPAFFSLGDQ
LDYGGFENRALEPGQEYVFFILAELNSTTGRMYVASPYTDKVIAPDSDPQPFDAGDGLIW
VVGPVLAVVFIICIVIAILLYKNKPDSKRKDSEPGTKSLLSNAEMMAHHPTDPVEMRRIN
FQTPGMMSHPPIPISELAEHIELLKANDNLRLSQEYESIDPSQQFTWEHSNLEVNKPKNR
YANVIAYDHTRVVLAPTDGILGSDYINANFIDGYRKQNAYIATQGPLAETFGDFWRMVWE
QRTASVVMMTRLEEKSRIKCDQYWPSRGTETYGMTQVTLLDTMELATFCVRTFSLHKSGS
SERREVRQFQFTAWPDHGVPEYPTPFLNFLRRVKACNPPDAGPIIVHCSAGVGRTGCFIV
IDAMLERIRHERTVDIYGHVTLMRSQRNYMVQTEDQYSFIHESLLEAVACGNTEVAARSL
YSYMQKLSKVEPGEHVTGMELEFKRLANTKAHTSRFVTANLPCNKFKNRLVNIMPYETTR
VCLQPIRGLEGSDYINASYIDGYRQQRGYIATQGPLAETTEDFWRMLWEHNSTIVVMLTK
LREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQF
TDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPIAVHCSAGVGRTGVFITLSIVLERMR
YEGAVDIFQTVKMLRTQRPAMVQTEDEYQFCYQAALEYLGSFDHYAT
NT seq
5904 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgtgtaagccagacggagttctggcacagtccaggcgaaccatccttggcttc
tgcttcttctcatctcccctgtgtctgttgctgcctttgattatcctcctaaccaggcca
tgggacagcttgtgtgaagcactagctccaccgaagttcaccaaaattcccacagaccag
atcggagtgtcagggggtgtggcatcatttgtgtgccaggccactggcaaccccaagcca
gtcgtctattggaacaagaagggcaagaaggtcaactcccagcgtatcgaggtgaccata
gagtttgacggaggtgctggagccgtgctgaggatccagcctctcagagctcctcgagat
gagaatgtctacgagtgtgtggcacgcaacagccaaggaaacaacaccaccactgcaaag
ctggatattatcagagaggacgtgttaccatctggcttcccgagcatagacatgggtccc
cagctgaaggtggtggagcggacaaagacaaccaccatgctttgtgctgccagcggcacc
cctgacccagatatctcctggttcaaagacttcctccccgtcgaccccagcctcagccag
ggtcgcatcaaaaagcttcgatcaggagcattgcagatcgaaaacagcgaggagacggac
caagggaagtacgagtgtgtggcaaacaactcccaaggcgtgcgctattcctccccagca
aacctttatgtgcgagagcttcgagaaggagcttcagatacattgcgccgcgtgccccct
cgtttctctatctcacccaacaatcacgagatcatgcctggggggagcgtcaacatcacc
tgcgtggccgtgggttcgcccatgccttacgtcaagtggatgttgggcatggaggacctg
accccggaggacgagatgcccatcggacggaatgtgctggagctcaacggcgtccgggag
tcggccaactatacctgcgtggccatgagcagcctgggcatcattgaggccactgctcag
gtcttagtcaagactttaccaaagcctcctggcatgcccatcgtcacagagaccacagct
accagtgtcaccatcacctgggactcgggcaatcccgaccccgtgtcctactacatcatt
cagtaccgggccaaagggccagacagcaagtatgagacggtggacagcatcaccaccacc
cgctacagcatcggtggactctaccccaacactgagtacgaaatacgggtgtcggccttc
aacagcatcggacaggggccgccgtcggcacgcgtggaggctcgcaccggagagcaagcc
cctgcgagccccccgaggaacgtgcaggcccatgtcatctctgagaacacggtgatggtg
cgctgggaggaaccagaggagcccaatggacaggtgaaaggctatcgtgtatactacacc
atggacccatcccgagccattaatgagtggcagatacacaacgtgcaggacagcgtgatc
actaccattcagaacctcgtggcctcagagacatacaccatccaagtcctcgccttcacc
tctgtaggcgatggccctttctcagatcctgtacatgtgaaagttttgcgtggagttcca
ggtcaaccaggaaagtttaaagtcgggaaggtgacagacaccagcattgagctgacctgg
gagcccgcgtacaccaaggagaaaattgtcaactatgagcttctctacaagcctgtcaag
tttggcagtttggagaagttgaccttcgggtcgaggaactcttacactgtcgagggcctg
aaagcgaacaccgagtactccttctccctggccgccatctccaacaaaggcatcggcgcg
ttcaccaatgaacttgtgcagaggacatcccaagccaagccctcagctgcacctgaaggt
gtgtcctgcgagagtgtcagctccacctcactgggagtgagctggaggccgcctcaggtg
gaggcccagaatggcgagttggcaggttatgagctcaaataccaaagggtttctgggaca
ggagaagaagaaggaggagaaactcagggctttgaggtggatgggcctcccatcacagcg
cagcagacacagattgtgttagagggcctggagaagtggagctggtacaatatcactctg
gcagcctccacagcagaggggaccggacccagaagcccggccgtgctgtgcagaacacat
gagggtgttcccggcgccgctccccgacaggtggacgttcagccgctcaactcctcagct
ctccgggtaacgtggcgctctgtgttgccacggttacggcaaggccagatacgggggtac
caggtgcacttcagccgcacggagagcggggaatcacgcaccctgccccgaatcaaagac
cttctattggatgaatcccagatggaggaggatgattcgactcagtatgaactggtttta
ggaggtttgaaagcagagaccttgtattctgtctcagtggctgcatacaccaccaaaggg
gacggagcacacagcaaagctaagctggtgcagaccacagggattgtgcctggctctccg
tccctgtgggtgcgtccgggatccggctcgtctgtggtggtgaggtggtctcctccgctt
gaatgctccgagacaggttctgatggccgggtggccccagtggaaatccagggctaccgc
ctacagttcgggctgaagaacacttctttaaacggcactgtcgatttccaacctcaagag
agaaatttcactgtcagaaacctctccccagggtcctcctacatctttgtcctctctgcg
aaaagccgagccggctatggaaatgcgacgcaacaggaaatagctgttcccatgtgtcca
ccctcaggataccctaaaataatcgattttgtgaacgctacctgctgctccctccagttc
tcctggctgcccccctccccagacgagtgcagcaacgccgtcacagagtacaccgtagct
tacagaaaggcttccaactcgggctcctctgccctaccagcctcttctgctcccccttgg
ctcatcacacttcctgcaagtgagtccagctataccatcttgggcctgaatcacagcaca
gcctacgaggtgcagctcagagcccacaaccaggcagggccaggccctttcagccctgct
ctgttgtacctcaccctggcctttgaaacagatgtgccgagaaatttttctgtcaatctg
gccaccaagaccagcgtccttctcacctgggattttccagaaaccagcaacccctaccgc
ttcattgtggagtacaaccgtcagaagatggaggtggacgcacgtttgaagaaggcagtc
atcccgaacttgcagccagacaccagctatgactttaaaatcacggctcccgagggcaac
atgggaggccttcgccaccgcatcacagccaaaacgtccccaccaatcaccatccgccgt
cctgagatcgaccaaagtcgccgtgaaaccgaagccacggtcaccatcatcctgccgttg
ctggaaactcgcactcctgtcaagaacatttatgtcgttgtggttccattgcggagagcc
cgcggcgtcatcagacacctgaagagtccagatgaaatggaccttgaggagcttttgaaa
gacatcagtcaaaggcagagggattctcgacagcagaagcaggtggacctaaggcgggct
tacatcacagcccgtttcacacctgaaaccctaccagccttcttctcgttgggggaccag
ctggactacgggggctttgagaaccgtgctctagaaccgggccaggagtacgtctttttc
atcctggctgaactgaactccacaacagggaggatgtatgtggccagcccttacacagac
aaagtgatcgccccggattcagacccccaaccctttgatgcgggcgacggactgatctgg
gtggtcggacccgttctggctgtggtcttcatcatctgcatcgttattgctatcctcctt
tacaaaaacaaacctgacagcaagcgcaaagactctgaaccaggaaccaagagccttttg
agcaacgcggagatgatggctcatcacccgacggaccccgtggagatgagacgcatcaat
ttccagactcctggaatgatgagccacccccccatccccatcagtgagctggctgagcac
atcgagctgctgaaagctaatgacaacctgagactctcccaagagtatgagtcgatcgac
cccagccagcagttcacctgggagcactccaacctggaggtgaataaacccaaaaaccgc
tacgccaacgtcatcgcatacgaccacacccgagtcgttctggctcccacagacggtatc
ctggggagtgactacatcaatgctaacttcatcgacgggtacagaaagcaaaacgcctac
attgccacccaggggcccctggcggagacattcggggacttctggaggatggtgtgggag
cagcgaaccgcctctgtcgtcatgatgacgcgactagaggagaaatctcggatcaagtgt
gatcagtactggccaagtcgcggcacggagacatacgggatgacccaggtcacgctgttg
gacacgatggagcttgccactttctgcgtccgcactttttctctgcataagagtggcagc
agtgaacggagggaggtgcgtcagttccagttcaccgcctggcccgatcatggtgtgcct
gaatatcccacccccttcctgaatttccttcgcagggtcaaagcctgcaaccctcctgat
gccggacccatcattgttcactgcagtgccggcgtgggtcgcactggctgtttcatcgtc
atcgacgccatgctggagcgcattcggcatgagcgcaccgtggacatctacggccacgtg
actctcatgcgctcgcagaggaactacatggtgcagacggaggaccagtacagcttcatc
catgagtccctgctggaggccgtggcctgtgggaacacggaggtggcggcccgcagcctg
tactcctacatgcagaagctgtcaaaggtggagcctggagaacatgtcaccggcatggag
ctggagttcaagcgtctggccaacaccaaagcccacacatcgcggtttgtcacagccaac
ctcccttgcaacaaattcaagaaccgactggtgaacatcatgccctacgaaaccactcgc
gtttgcctgcagcccatccgcggcctggagggctccgactacatcaacgccagttacata
gacggatacaggcagcaaagaggctacattgccacccagggtccacttgccgagactacg
gaggacttctggaggatgctgtgggagcacaactccaccatcgtggtcatgctgacaaag
ctgagagaaatgggacgggaaaagtgtcaccagtactggcccgccgagcgctccgccagg
taccagtactttgtggttgacccgatggcagagtacaacatgccccagtacatcctgcgg
gagttcaaagttacagacgccagggacggccagtccagaacggtacgtcagttccagttc
accgactggcctgagcaaggcgtgccgaaatctggggagggcttcatcgacttcatcggc
caagtgcacaaaaccaaggagcagtttggccaggacggaccaatcgccgttcactgcagt
gctggtgtggggcggacaggtgtcttcatcacgctgagcattgtcctcgagaggatgcgt
tacgagggcgcagtggacatcttccaaactgtcaagatgctgcggacacagagaccggcc
atggtgcagactgaggatgagtaccagttctgctatcaggctgctcttgagtacctgggt
agctttgaccactatgcaacataa
DBGET
integrated database retrieval system
