Xiphophorus hellerii (green swordtail): 116721405
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Entry
116721405 CDS
T07363
Symbol
afg3l2
Name
(RefSeq) AFG3-like protein 2 isoform X1
KO
K08956
AFG3 family protein [EC:3.4.24.-]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xhe01002
]
116721405 (afg3l2)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
xhe03110
]
116721405 (afg3l2)
Peptidases and inhibitors [BR:
xhe01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
116721405 (afg3l2)
Chaperones and folding catalysts [BR:
xhe03110
]
Other chaperones and cochaperones
AAA proteases
116721405 (afg3l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_5
AAA_22
AAA_16
TIP49
AAA_2
RuvB_N
AAA_14
AAA_28
AAA_33
nSTAND3
ThcOx
LonB_AAA-LID
AAA_17
Mg_chelatase
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
116721405
NCBI-ProteinID:
XP_032420987
LinkDB
All DBs
Position
6:30550842..30556243
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AA seq
834 aa
AA seq
DB search
MITERLFWTRSVFRTPSSLSAMAHRYLRLPAGCGSLVRLLLRPCGATARTVSPAGSGRVR
SGPVPLSELSGASRILSSKPPKGFEKYFPESQNRARTSEPEAKGKEDTESKPAQKPSGKP
GGSGSGGGKRGGRNEENHWYSRLQKGDVPWDDKEFRLYLLTGVAFWTAITYYFFLRDGGR
EVTWKDFVNNYLAKGVVERLEVVNKRYVRVAFSPGKTPLDGQYVWFNIGSVDTFERNLET
AQSELGIESENRLPVVYSTESDGSFLLSMLPTALIIGFLLFMLRRGPAGGGRPGRGMGGL
FSVSETTAKILKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTG
PPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFVMARKNAPCILFIDE
IDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALLRPGR
FDRQIYIGPPDIKGRASIFKVHLRPLKLSTDLDKDALAKKMAALTPGFSGADIANVCNEA
ALIAARHLSDTINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWFLEHA
DPLLKVSIIPRGRGLGYAQYLPREQYLYTKEQLLDRMCMTLGGRVAEEIFFGRVTTGAQD
DLRKVTQSAYAQIVQFGMNPKVGQVSFDLPRQGEMVLEKPYSEATARLIDSEVRTLIGEA
YRRTQQLLTDKKAEVDKVPPWSARVCRPWDPSKVAQRLLQREVLSKEDMEELLGRRPFAE
RSTYEELVEGTGGEDEDTALPDGLRDWNRDRNQDRNQESPEEQVARQISGGMPF
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgattacggaacgtttgttttggacccgctccgtgtttagaaccccgtccagcctcagt
gccatggcccaccggtacctgcggctgcctgcgggctgcgggagcctggtccggctgctg
cttcggccctgcggagctaccgccaggacggtgtctccagccggttctggtcgggtgcgg
agtggacccgtccccctgagcgagctgtcgggagcctctaggatcctgagctccaaaccg
cccaaaggatttgagaaatatttcccagagagtcagaaccgggccagaacctctgaaccc
gaagctaaaggtaaagaagacacagagtccaaacctgcccagaaaccgtccgggaagcca
ggaggatccggatccggaggagggaaacgaggcggccgcaacgaggagaaccactggtac
agccgcctgcagaagggcgacgtcccttgggatgataaggagttccgcttgtacctgctg
accggcgtggcgttctggaccgccatcacctactacttcttcctgcgggacggaggtcgt
gaggtcacctggaaggactttgtcaacaactacctggccaaaggagtggtggagcggctg
gaggtggtcaacaagcgctacgtcagagtggcgttctctccggggaagacgccgctggac
gggcagtacgtctggttcaacatcggcagcgtggacaccttcgagagaaacctggagacg
gcccagagcgagctgggcatcgagagcgagaaccgcctgccggtggtatactccaccgag
agcgacgggtcgttcctgctcagcatgctgcccacagcgctcatcattggctttctgctc
ttcatgctgcggcgtgggccggcgggcgggggccggccgggccgcggcatggggggtctg
ttcagcgtaagcgagaccaccgccaagatcctgaaggacgagatcgacgtcaagttcaaa
gacgtggcggggtgtgaggaggccaagctggagatcatggagtttgtcaacttcctgaag
aaccccaaacagtaccaggacctgggggccaagatacccaagggcgccattttgaccgga
cccccaggaaccgggaagacactgctggccaaggcgacggcaggtgaggcaaacgttccc
ttcatcacagtgaacggctctgagttcctggagatgttcgtgggagtgggccccgccagg
gttcgggatctgttcgtcatggcccggaagaacgcgccctgcatcctcttcattgatgag
atcgacgccgtgggccggaagcgcggccgcggcaactttggaggccagagcgagcaggag
aacacgctgaaccagctactggtggagatggacggcttcaacaccgccaccaacgtggtg
gttctggccggaaccaaccgacccgacatcctggacccggccctgctgcggcccgggcgc
ttcgacaggcagatctacatcggtcctcctgacataaaaggacgggcgtccatctttaag
gtccacctgcgtcctctgaagctcagcacagacctggacaaagatgctctggctaagaag
atggccgccctcacgcctggattttcaggcgccgacatcgccaatgtgtgcaacgaggcg
gcactgattgccgcacgccacctgtccgataccatcaatcagaaacactttgagcaggcc
atcgagagagtgatcggaggtctggagaagaagacccaggttctgcagccggaggagaag
aagacggtggcgtaccatgaggcgggtcacgccgtggctggctggttcctggagcacgcc
gacccgctgttgaaggtgtctatcatccccagggggcggggcctgggctatgcccagtac
ctccctagggagcagtacctgtacactaaggagcagctgctggaccgcatgtgcatgacg
ctgggaggccgcgttgcagaggagattttcttcggccgggtcactactggcgcccaggat
gacctcaggaaggtcacacagagtgcctacgctcagatcgtccagttcgggatgaacccc
aaggtgggccaggtgtccttcgacctgccgcggcagggcgagatggttctggagaagccg
tacagcgaggccacagcccgcctcattgactccgaggtccggaccctgatcggcgaggcg
taccgccgaacccagcagctgctgaccgacaagaaggccgaggtggacaaggtaccgccg
tggtccgcccgggtctgtcgcccatgggatcccagcaaggtggcgcagcggctgctgcag
cgggaggttctgtccaaagaggacatggaggagcttctgggtcggcggccgtttgcggag
cgctccacatacgaggagctggtggaagggaccggcggcgaggacgaggacacggcgctg
cccgacggcctgagggactggaaccgggaccggaaccaggaccggaaccaggagagcccg
gaggagcaggtggcccgccagatctctggaggcatgcccttctag
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