Xiphophorus hellerii (green swordtail): 116721422
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Entry
116721422 CDS
T07363
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116721422 (chd7)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116721422 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
Chromo_MIT1
HTH_Hrp3
HDA2-3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
116721422
NCBI-ProteinID:
XP_032421017
LinkDB
All DBs
Position
6:10846398..10934756
Genome browser
AA seq
3278 aa
AA seq
DB search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NT seq
9837 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccagggatgttgagcctctttggtgacgatgcagggttgttctcggacgaa
ttggatagtttgggagactgcttcccccagcagtcagcggctggcccagccaacccactc
gccccacccacaaacccatctctgaaccacgagcaccagggaaccagggcttaccaccaa
gggatgcttcacggcactgggaccggaccggggcagtccaaactggggcagatgtatgag
cacagcccgtatacaggctacgatcaagcgggtgcccccggaggacggatgatggcccag
aacggtcccagccagggctcgccgactgtgaacacggccatgaacggcatgacctcccac
taccacaacaccccagctaactctagcaacactcaccacgggtaccagggtgatgctggg
gcagcaggaggaagcgggggcggagtttggggcccacagcagcagagcagatctgtgtat
cagcaggcttcagcaccatcaggggctggtcccaaccagatgggaagctaccaaatgtct
caaggcaactacgctggcatgcaaggtcctcctacatccggtgcagcacgcatgaatcaa
cactacccttcacagagcatggcccccgttccagctcaggacccatctcactacttagga
catgttgggatggggggggtccagatgagacagcctcagccgcagccccagaactatccc
aacatgggccacgcacctcgatacccacactccccttctagacaacctccacaccagcac
caacagggcatggcaccattcgggggtgctcagtaccctggctatcagccccaatatgct
gccatggggcctgggatgggccagggggctaatgctaacgtcagcgctaacaccagccag
gccatgggagcagggcagctgggccagaggttcaaccagggagtgagctcagcaccgggg
caacagggacaacgatacccctctgttccaccccaccagccccactctgcctcaatgcag
cagcaggcagggcagcaaggccagcctatgcatcccctaaaccaccccccgaatcttccc
caacctccaaaccaatcccaatcccaccttaccgccccagctcagggatcttacccctcc
ccgtcgtctatgtccccaatgcgggttctgggaaccccaactcctcctccccagcaagga
agaccccccagcgcaggactagccgggcctccggatgtcgcaggatacacagcaatgcat
tctccgcccagcgctatggcccatgcacagagaactccccagacctccctatctgcagca
cacccacaacaccagcagccccacaacatgcctcccagtgcagggcaaatttatcctggc
atggggcctcagcgtggaccacaaatcgggccgactcggctccagcaaccacaagggcct
cacgaagcctcagtcagccagggggtggaccagcgcctgctccaggcccagcagcaggcc
tctcgaggtgggcagcccatgccgtctgctcctttggggttccagggtccgcctattggt
caacacggagcccctgcccctaaccagggcttagctccacctgcccagaacactcagacg
cagcacacgcatctgcccccacacccccaccacctgcaaagcacgccccctcctcccagc
caggcctcccacccatgggcacctcagccatctgccccccacccactctcctcaccccct
cttaccccacagaaagtgcctcacatacagcattccccctcagacctgtcaggtgatgcc
tcaatgatggttaccgacaggccgacggttggtgccggagcccccagccagcctatcagc
acagagaagcctactgatcaggagaccaagccaaaaaagaagaagaaaaagaaagctaaa
gcggtggaagaaaaagaagatggaggcaagaaagaagcaagagaaggaggagatgaagac
ataaagtctgagtttcctgcagcaggaagcaatgcaagtgaacagcttattggcacagga
gctgttgaagggagtttgcccccaccggaggagaagaagaagcggaaaaagaaaccaaag
gagaagacggagggcaaggagcccaaagagcccaagaccccgaagacccccaaaacacct
aagactcccaaagagcccaaggagcccaaggagaagaaagccaagagcaccacacccaag
gccaagactcccaagaaaaccagcagtaaaaaggtggaatcagagggcggggccagcgct
gctaagaaggacgccaagaggaagagagagctgtcagtcggtgacgatgtggaggtgaag
tctccactgccctctcctcctgaagaggaggatgatgatggtgtgcagaagcgccgttcg
agtcggcaggtgaagaggaagaggtacacagaggacctggagttcaggatctctgaggac
gatgacagcggagacgattcaccaacaccaaaatctccctcatcctcctcacaacaacag
gatctgactgagactgaagggcctgttgtggagaagatcatgggtatgcgcagcgccaag
aagcaactggagtcgggcgaggaagtggaggtggaggagttctacgtcaagttcaagggc
ttttcatacctgcactgtcgctggtcggaactggaggagctggagaaggacaagagaatc
caccagaagataaagaggtttaaagccaagcagcaactcaacaacttcatcactgagatg
gacgatgagccttttaacccggactatgtggaggtggaccgagtcctggatgtttcagag
agcacagatgaaaatggagagattgtcaccttatatttggtgaaatggtgcagtttgcct
tatgaagacgccacctgggagctaaaggcggacatcgaccaatctaagatagatgaatac
gaacgcatcgcagcgcgcgaacccaacactaaccgagtggatcggccttctgcagccgac
tggaaaaagctggagagctcaagagaatacaggaatggcaacgcactcagggaataccag
ctcgaaggcctcaactggctgactttcaactggtacaactcacgtaactgtatcctggca
gacgagatggggcttgggaagaccatccagtccattacattcctctatgagatatacata
aagagcattgaggggccattcctgatcatcgctcctctctccaccatccctaattgggag
agagagttcaggacctggacggagctcaatgtggtggtctaccatggcagccaggccagc
cggaaaaccatccaggcctatgagatgtactacagagacgcacagggtaagataataaaa
ggtgtgtatcggttccatgctgtcatcacaacgttcgagatgatccttgccgactgtccg
gagctgcgcagcatcccgtggcgctgcgtggtgatcgacgaagcccaccgcctcaaaaac
cgaaactgcaagctgctggaggggctcaaaatgatggatatggagcacaaagtcctgttg
acaggaactcctcttcagaacacagtggaggagctcttcagcttactcaacttcctggaa
ccagagagattcccgtctgaacagactttcatgactgaatttggagacttgaagactgaa
gaacaggtccaaaaacttcaaggtattttgaagcccatgatgcttagaagactgaaggag
gatgtggagaagaacctggcccccaaagaagaaaccattatagaggtggagttgaccaac
atccagaagaaatactatcgggccattctggagaaaaacttctccttcctgtccaaagga
ggcgcaggaggaagtggatcagctagtgtgcccaacctcctcaacaccatgatggagctg
aggaaatgctgcaaccacccctacctcataaatggagcggaggagaagatcatcgaggag
ttcagggattcccacggcggcaggattgatgtgcctgaaatggccctccaagctatgatc
caggcagctgggaagctggtgctcatcgacaagctgctgcccaaactaaaagccggagga
cacagggtgttgattttcagtcagatggtccgctgcctggacattctggaggactacctc
atccagagacgctatccatatgaacggatagacggccgcgttcgggggaacctgcgacag
gcggccatcgacaggttttccagaccagattcggaccgatttgtcttccttctctgtacc
agagctggtgggcttggcatcaacttaaccgcagcggatacatgcatcatcttcgactct
gactggaaccctcagaatgaccttcaggctcaggcgagatgtcatcgtatcggccagtcc
aagtcggtgaagatctaccgcctgatcaccaggaacagctacgagcgggagatgtttgac
aaggccagtctgaagctcgggctcgacaaggccgtcctccagagcatgagtggccgagag
aacgccaacagcggggttcagcagttgtctaagaaagagattgaagacctactgagaaaa
ggcgcttatggcgctttgatggacgaagaagacgaaggctcgaaattctgcgaggaagac
atcgaccagatcctccagagacgaacccacaccatcactatcgagtcggaggggaaaggc
tccacgtttgctaaggccagtttcgttgcaacaggaaaccgaacagacatttctctggag
gatccagacttctggcagaaatgggccaagaaagcagagctggacatggactccatcaac
ggccggaacactctggtgatcgacacgcccagggtgaggaagcagacgcggcactacagc
agcgtgaaagaggacgaaatgctcgagttctctgagctggagagcgacgacgacgagccc
agcaagccgtcttccaaacaacgacggcctcaagacaaaacccagggatacccccggtcc
gagtgcttcagggtggagaagaacctgctcgtctacggttggggtaggtggagtgacatc
ctcgctcacggccgcttcaagcgtcccctgaaggaggcggacgtggagacgatctgcagg
gctctcctggcctactgtctgctgcattaccgtggcgacgagaacatcaagagcttcatc
tgggacctgatcactccaagtgaagatggctccaccaggacgctgacgaatcactctggt
ctctctacccccgttcccaggggcaggaaggggaagaagggcaagatgactactcctcct
cctcagacgccacgagctgattggctggccacctgcaaccctgaccatttactgcaggag
gacagctacaagaggcacttgaaacatcactgtaacaaggttctgctgagagtccggatg
ttgtattatctgcgacaggaagtcatcggtgaccaagctgagcgcattctggaaggagcc
gactccagcgtgttggatatctggatccctcagccgttccacgctgaggtcccagctgac
tggtgggacacggaggctgacaagtccctgctcatcggcgtcttcaaacacggctatgag
aagtacaactccatgcgtgccgaccctgccctgtgcttcttggagcgagtgggcatgcca
gacgccaaagcgatcgccgctgaacagaggggctctgacatgatggcagatggcattgag
ggtgaggatgaggatccagagtataaaccgatacgtatgccatttaaagatgacctggac
gatttcaccaactctcccctggatgacaaagatgatgcagttgaaggcgagactgaagtt
aaatcaggtgagaatggccaaaacgtaccgtctgtgggcggagcttctggctccagcgag
cgactgtattggccagcggcctcggccctgacggccaggcttcgccgtctgatcacggcc
taccagcgctccaaccgcagagagcagctccgtcaggaggcactcaacagacccgacggt
cgccgacgacgacgcagggagttcctgccttccatccccatggttcctgaaacgggaggc
gctaccacgtacatccaggatggcacgggggtgttcatgacagacggaagcccatatttg
gctaaaggaagcgcttattttgccaaaggtagtcagtttctgccagaggcttcgccagtg
atgacggccaactccctgatgtctgatggatccctgtattatagagagaggagacaaagg
tggacgcgtcgtgaggaggcagacttctaccgtgttgtgtccacctttggagtcgtgttt
gatacgcaacgtcaaaagtttgattggacccagttcagagcgtttgcccggctggacaaa
aaaacagatgagagtttggagaaatattactactcattcattgccatgtgcaaacgggta
tgcaggatgcaggtcaagaccgagacagaacttccagacccgaccctgatcattgaccca
atcaccgaggagcgcgcctctcgcaccctgtaccgcatcgagctgctgcgccgcatccga
gagcaggtcctccctcacccgctgctttctgagcgcctcaagctctgccagccatctccc
gacctgcccgagtggtgggagtgcgggcgccacgaccgtgacctcctcctgggggcctcg
aagcacggcgtcagccgtacggattatcacatcctcaacgaccccaccttgggcttcctg
gaggcccaccagcgcttcaccagtcagcgaggcgccgtcggcatcggctctcttggagaa
ctcggcaaagtcgggatggggatcgcagaagcggcctctgcgccacttctcacgactgca
gagctggagagtgccgcagccgctgccgaaatggccgtggacgcagctgaagaggaggaa
gaagggaaggctgtaaaaatggaagaagagaaaacagaagtggaggtaaaaatggaaacg
gaggaggaagattccagcaacattccatgtatgaagactgaaccccttgagcaaaagaga
aaccaggacaatgctgataaagggaaagaagaggcagctgcttcactcatgaaggtcaaa
gctgaagacgttttgccagaggttgagaaagacgatgatgaagcgaaaccagaaagccag
acgacaaatgaccaagatcacgacatgacagaagaaaagagcagcacaagccctgaatat
tatctaagcaacgagaaagacgttggcgctgagctcccagaatcctctgctgaagcacaa
cttggccccaagactgcagaggaggaagatggcgaggagaaggagacttctgaatgtctt
aaatctccaaagtctgctgaaactgagaaaagccctgaggaagaggaggaggagaggctg
gatgaagatgacaaatcggagaagtcctctcaggctgaagcgagcgcagggcagaagaac
ttcgacgaggagagcatcgcttctctgagcacatccgtacgggacgagacccgagacgag
ttctgtcccgacgacctgcaggaaacgtctgtgctgcacaccctgcaggaccgcgcctac
gccttctctttctggcctaaggaccgcgtgatgatcaacaggctggataacatctgcgag
gctgtcctgaagggcaagtggcccgtcaacagacggcacgtcttcgacttccctggcaac
ctcttgcccggtcacggctccgcggcaaccgcagccgccgtagccatggtgagcgagagc
ccgctgcagagacggagccttgccgagctgacgatggccggcatccacacgccgtacagc
gggagcgaagacaaaacgctgtctccgcaggttcatgacgacgctctgagcctgacggtg
cctcgacagaggaggaggagaaggaaaaagattgagatcgaggcagagagagcggcgaag
aggcggaacctgatggagatggtggctcagctgagggaaagccacgccgccgcagagtct
cagaaccaggccattgacctcactaagggcgtgcaccaccactacaaagcttctccgtca
ttggccggcttccccagtgccttgatgacgaacccttccctcaaggcccagatggatttg
cttcagcaagtcccaccttccgggcacagagccaacggttcgttggacgccgacctgccc
atcacgaagaggaggcggggccgcaggaaaaatgtggagggcctggagctgctgttcatg
ggcaacaagagagcagccggggatgattccgatgggacaaagatttcaggagtggaggcg
gtccaggaagcgccccagtcccacagaccgatcagcgtcccggagcagagccccaacgcc
cgctctctggcctcaggcagcctggaggaggaggagacgcccgtctccagcaaagaccta
ggagagtggctgagacagcatcccacatacaccatggacatgactggattcacaccaaag
agcgaggagttgctgttatctcagttctccaagcccaagcagaagcgccatcgctgtcga
aaccccaacaagatcgacataaacacgctgaccggagacgagagagtccccgtggtcaac
agacggaatggacgcaagatgggtggggccatggctccaccaatgaaggagctccccagg
tggttattggagaaccccgagttctccatcgctcctgattggacagacatcgtcaaacag
tcgggtttcctcccggaagccatgtttgaccgccttttgaccggccctgttgtcagagag
gaaggcgttcgtcgtcgagggcggcgacccaaatcggagatagtgaaggcggccgccgcc
gctcaggccgcagcggcagcgcaggctgcacaggcgtcgctggcgtcagccgcttcctct
gcagggggaatcaacccgctgctgctcagcagcctgtttggagggatggacctgtcgtct
ctccagagccttcagtcgctccagttggctgctggtctgatggccttcccgccacctgct
gaccccaaacagtctgccgccaacgctgccgccgcctccatgctgcccctcatgatcccc
agcatgggagggctgcccaatatggccgccgccattcccaacatgttcagccttggagga
atatttggaggtaacctggcggccgccgccgctgccaccgccgcttccggaaacaccaac
gggacgctggagggagacggaggcaacggggaggagacggcaaagagggagaaggaggcg
agagaagacggagacgagatgggagaggaagatgatgaagaagaggaggcggcggaggga
gaggagggtggtgtgaaaaagaccaagaagaggaagatggaggaagaggttgaaaaaaag
gagaaacctgtcggcgatgcgtccggtgctcctaagatggcagctgccgaggctccagca
gaggtttccatcaacggggacacagccgccctgctggccgccgccggtatgtcggccaac
tccctggcgttcaaccctttcctgctgtccaccatggcgcccagcctcctctacccctcc
atgttcctcccgccgggcctggccggcctcagcctgcccggcttccccaccgcctccctc
gccgagctgcagagcgccatggccggggcgctgggcgacagcgcctccaccccgaacccg
ccgagagacgccgagggggagaagagggacgacgggaaggctgtggacgacgaggaggaa
gaggaagaggaggagggagaggagacggactcggcggagcagaaagaggaaggagcgacg
ggcggaggaatgccggaggagtcggcggcgtctccccagaacggaacgagtgactga
DBGET
integrated database retrieval system
