Xiphophorus hellerii (green swordtail): 116721438
Help
Entry
116721438 CDS
T07363
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00061
Fatty acid biosynthesis
xhe00071
Fatty acid degradation
xhe01100
Metabolic pathways
xhe01212
Fatty acid metabolism
xhe03320
PPAR signaling pathway
xhe04146
Peroxisome
xhe04216
Ferroptosis
xhe04920
Adipocytokine signaling pathway
Module
xhe_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
116721438
00071 Fatty acid degradation
116721438
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116721438
09143 Cell growth and death
04216 Ferroptosis
116721438
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
116721438
03320 PPAR signaling pathway
116721438
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xhe01004
]
116721438
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116721438
Enzymes [BR:
xhe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
116721438
Lipid biosynthesis proteins [BR:
xhe01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
116721438
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of breast milk
116721438
Exosomal proteins of breast cancer cells
116721438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
116721438
NCBI-ProteinID:
XP_032421046
LinkDB
All DBs
Position
6:complement(13668103..13680598)
Genome browser
AA seq
709 aa
AA seq
DB search
MKLKEDINPLLLQVFRSVVWVYSVITFLPWYFFSGAGTNLERARRIKACSVSGHPAGPYR
AINSREKLVALVQPGVDTLDKMFEFAARRFPNRDCLGTREVLSEEDELQPNGKVFKKVIL
GNYNWLTYEEAYNAAKCFGSGLAALNQKPHHNIAIFCETRAEWVIAAQACFMYNFPLVTL
YATLGPKAIAHGLNETEVTHIITSKDLLQSRLKAILCDVPRLQYIIVVDIKPTSWSGMPR
GITVYNMEGVKELGSKPVHMDRRQPESSDIAVIMYTSGSTGIPKGVMISHGNLIAGIAGM
AERIPNLNETDTYIGYLPLAHVLELSAELVCISHGCRIGYSSPQTLADQSSKIKKGSKGD
TSVLKPTLMASVPEIMDRIYKNVMTKVDEMSKFQKTLFVFAYNYKMEQISKGYSTPLCDR
IVFNRVRSLLGGNTRVLLSGGAPLSAATQRFMNVCMCCPVGQGYGLTETCGAGTISEMWD
YSTGRVGAPLVCSEITLKDWEEGGYHSTDKPNPRGEILIGGPNVTMGYYKSEGRNHEDFF
VDAKGQRWFCTGDIGEFHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAVLKNCPLIDNIC
AYANSEESYVISFVVPNHKHLMALAEQVQIKGTWEELCNNPKMEKEVLRIITEAAATGKL
EKFEIPKKIRLSSEPWTPETGLVTDAFKLKRKELKTHYQEDIERMYGGK
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgaaggaggatataaaccccctgctcctgcaggttttccgctctgtcgtctgg
gtctattctgtcataaccttcctaccctggtacttcttttccggggctggaaccaatttg
gagcgagcacgtcggattaaggcctgctctgtcagcggacacccagcgggaccttacagg
gccatcaatagccgagaaaagctggtggcattggtgcagccaggagtcgacacactggac
aaaatgttcgagtttgcagcgaggaggtttccaaacagggactgcctgggcaccagggag
gtgctgagtgaggaggatgaactccagccaaatggaaaagtctttaaaaaggtgattctg
gggaactacaactggctcacgtatgaggaagcctacaatgcagcaaagtgctttggtagt
ggtctggcagctcttaatcagaagcctcaccataacatcgctattttctgtgagaccaga
gcggagtgggtcatagcagcgcaggcctgcttcatgtacaatttcccactcgtgacactg
tatgccacactcgggcccaaagccatagctcatgggctgaatgagacagaggtcactcac
atcatcacaagcaaggacttacttcagagccgccttaaggccattttgtgcgatgtgccg
cggctccagtatatcatcgttgtggacattaaacccacaagctggtcaggcatgcccaga
ggcatcacagtctacaacatggagggtgtgaaggagctgggatccaagcccgttcacatg
gaccgtagacagccagagtcctcggacatcgctgtcatcatgtacaccagtggttccact
ggcatccccaagggtgtgatgatctcccatggcaacctcatcgccggcatcgcaggcatg
gccgagcggatccctaacctcaatgagactgacacctacattggctacctaccactggcc
cacgttttagagctcagcgcagagctggtttgcatctcccatggatgtcgcatcggatat
tcctctcctcagactctcgccgaccagtcctccaagatcaagaagggcagtaaaggggat
accagcgtgctaaagccgactctcatggcatctgtgccagagatcatggatcgaatttac
aaaaatgtcatgaccaaagtggacgagatgagtaagtttcagaagacgctctttgtgttt
gcttataactacaagatggagcagatctccaagggctacagtacgcctctctgtgacaga
atagttttcaacagagtacggtctctgttgggaggaaacactcgagtgctactctctggt
ggagctccactctctgcggcaacgcagcgcttcatgaatgtctgcatgtgctgcccggtg
ggacaaggctacggcctgacagagacatgtggcgctggcaccatcagtgagatgtgggat
tacagtacaggacgggttggcgctccactggtttgctcagagatcactctgaaggactgg
gaagagggtggctatcacagcactgacaagcccaacccaaggggggaaattttgattgga
ggtccaaatgtaacaatgggttactacaaaagtgaaggcaggaaccatgaagacttcttc
gtggatgcgaagggccagagatggttctgtacgggagacatcggagaattccatcctgat
ggatgcctgaagattatcgaccgtaagaaagacttggtgaaactccaggcaggcgaatat
gtctctctcggaaaagtagaagcggttttgaagaactgcccactcatagacaatatctgt
gcctacgctaacagtgaagagtcatatgtgatcagctttgtggttcccaaccacaaacac
ctcatggcattggcggagcaggttcaaataaagggcacgtgggaagagctctgcaacaat
cccaagatggagaaggaggttctccgcatcattactgaggcggccgccacaggaaaactg
gagaagttcgagattcccaaaaaaatccgcctgagttccgagccatggacaccggagacc
ggcttggtcaccgacgcattcaaattgaaacgcaaggagctcaaaacacattaccaagag
gacattgagaggatgtatggtgggaaataa
DBGET
integrated database retrieval system
