Xiphophorus hellerii (green swordtail): 116721454
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Entry
116721454 CDS
T07363
Symbol
pard3
Name
(RefSeq) partitioning defective 3 homolog isoform X1
KO
K04237
partitioning defective protein 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04144
Endocytosis
xhe04520
Adherens junction
xhe04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116721454 (pard3)
09144 Cellular community - eukaryotes
04520 Adherens junction
116721454 (pard3)
04530 Tight junction
116721454 (pard3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116721454 (pard3)
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116721454 (pard3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Par3_HAL_N_term
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116721454
NCBI-ProteinID:
XP_032421084
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All DBs
Position
6:complement(26641239..26898511)
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AA seq
1387 aa
AA seq
DB search
MKVTVCFGRTRVVVPCGDGNIKVHALIQQAVMRYKKAIAKDANYWLQVHRLEHGDGGILD
LDDVLCDVADDKDRLIAVYDEQEPHHGGDGTSASSTGTQSPDLFAADLGAGSVASAFQPY
QNASEIEVTPSALRANMPLHVRRSSDPALITINGPFSASELRVQTEEPPSRKNPTRWSTT
AGFLKARHSSGTNSLERKSKGLDTYRSLPRDAGTWSNQREFQRDTARSSLSANHPMVDRW
LEKQEQEEESREDENGRIEPVGRADSCMEHTPVRSLEDIVKLVEVSNDGGPLGIHVVPFS
GRDRRTLGLLVKRLERGGKAEHQGLFQENDCIIRINNGDLRNIRFEQAQNMFRQAMRSPV
IMFHVVPSSMKAHYEQLSHAERNPSFSSGRFSPDSLSGIDHNPQRINRHGSQTQTHPDPN
NGYPHLTHPAVTAAKPPTGHTHSPQRGLNSTPTPGYTKKVGRRFNIQLKKGPEGLGFSIT
SRDVPIGGSAPIYVKNILPRGAAIQDGRLKAGDRLLEVNGVDLNGRTQEEVVSLLRNTPM
GGAVGLLVLRQEDSFPPREVSAEPQKQSHRDLKTEEDELVLTPDGTREFLTFEIPLSDSG
SAGLGVSVKGNRSKENHADLGIFVKSIINGGAACKDGRLRVNDQLIAVNGESLLGKTNQD
AMETLRKSMSTEGNKRGMIQLIVARRVAKRNEDSSGNPLGSQQTVNTSLDDHERRISHSL
YGGLEGLDDDLMPRQGMIPRTIGNYQLSLTVNMPQDDTVIIEDDRPPLLPSNMSDQSSSS
SHDDVGFVADVTPPWAKELPAHNESALSPDENNPDVSFQREGFGRQSMSEKRTKQFGDAA
QLEIIKTRKSKSMDLVADEINLTPRPDTDAGSSTKDVGPSLGLKKSSSLESLQTAVAEVT
LNGDLPFHRPRPRIIRGRGCNESFRAAIDKSYDRPAALEDDDEGMETLEEDTEESSRSGR
DSVSTMADQTPLSAGPEKPLVNGTNRTKEEKKKDKDKPGKEKKKQDGGKEKDKEKGKPKK
GMLKGLGDMFRFGKYRKDERPAEKMDRKGSSKWRTEETQVSDEETMKMRMEQERIQAKTR
ELRERQARERDYAEILDVSRPLDRSSEEDHTYSGVNPLNMDSSHSRAHSPRDEYSHVHHQ
HQHSDSLYSPVSRARNDRPPSTDSNRLTPSNHDRIQRLRQEFQQAQNVPDDPDDRRRTYS
FEQSWSNSSSNGPGGYSQPGRHSVSVEVQMQRQRQEERDSFAQAQRQYSSLPRQPRKNPS
TVSQDSWDKAYPPGDVFQTAKDNPRYSSYQGSRNGYQGGGGGGAGVNARVLLEAQELLRQ
EQRRREQEAKGKMLQEGSRTSAYEGYNPHLKEPGSPKGPYRHDVPPSPSQLARLNRLGSE
KGRLFYS
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacggtgtgcttcggcaggacccgggtggtggttccgtgcggggacgggaac
attaaagtccacgcactcatccagcaggctgtcatgcggtacaagaaggctatcgccaag
gacgcaaactactggctgcaggtccaccgactggagcatggcgacggcgggatcctcgac
ctggacgacgtgctttgtgacgtggctgacgacaaagacagactgatcgccgtctacgac
gagcaggagccccatcacggcggcgacggaaccagcgccagctccaccgggacgcagagc
cccgacctgttcgccgcagacctcggcgccggcagcgtcgcctcggcgttccagccctac
cagaacgccagcgagatcgaagtcacgccttcggccctgcgcgccaatatgcctctccac
gtccggcgcagcagtgaccccgccctgatcaccatcaacgggccattcagcgcctcggag
ttgcgggtccaaaccgaagagcctccatccaggaagaacccgactcgctggtccaccact
gccggcttcctgaaggctcgccattcctcaggcacaaacagcctagagaggaagagcaaa
ggtttggacacgtaccgcagcctgccgagggacgcagggacctggtccaatcagagagag
tttcagagagacacggccaggtcgtcgctcagcgccaaccaccccatggtggaccgctgg
ctggaaaaacaagagcaggaggaggagagcagggaggatgagaacgggcgaatcgagccg
gttggccgagccgactcctgcatggagcacacccccgtcagatctctggaagacattgtg
aaactggtggaggtgtcaaacgacggcgggcctctggggatccatgtggtgcctttcagt
ggcagggaccgcaggactcttggcttgttggtcaagcgtctggagaggggaggaaaggcc
gagcaccagggccttttccaggagaacgactgcatcatccgtatcaataacggagacctg
cgaaacatccgattcgaacaagcacagaacatgttccgccaggccatgcgttccccggtg
atcatgttccacgtggtgccgtcgtccatgaaggcccactacgagcagctatcgcacgcc
gagaggaacccctcgttttcctcgggacgcttcagcccagactcgctgtccggcatcgat
cacaacccacagaggataaaccgccacggatcccaaacgcagacccacccggacccaaac
aacggctacccacatctgactcaccctgccgtcacggcggccaaacctcccacaggccac
acccactcacctcagagggggctgaactcgacgcccacgccggggtataccaaaaaagtg
gggaggcggtttaacattcaactcaagaaaggccctgaaggactcggcttcagcataacg
tcgcgtgacgtccccatcggcggctccgctccgatctacgtcaagaacattctcccccgg
ggggccgccatccaagatggccgccttaaggcaggagaccggctgctggaggtgaacggc
gtggacctgaacggccggacgcaggaggaggtcgtctcgttgctcaggaacactccgatg
ggcggcgcggtggggttgctggttctacgccaggaagactctttcccaccccgagaagtc
agcgctgaaccccagaagcaatcccacagagacctgaaaacggaggaggatgaactggtc
ctgactcccgatgggaccagagagttcctgaccttcgagatcccgctcagcgactcgggt
tctgcaggtttgggcgtcagtgtgaaaggcaaccgctccaaggaaaaccacgcagatctc
ggcatatttgtcaagtcaatcataaacggtggagcagcctgcaaggatggacgactgagg
gtgaacgaccagctgattgcggtgaacggcgaatcgctgttggggaaaaccaaccaagac
gccatggagacgctgaggaagtcgatgtcaacagaaggcaacaagcgcgggatgatccag
ctgattgtggcccgacgagtggccaagagaaacgaggattcttcaggaaacccgttggga
tcccagcagaccgtaaacaccagtctggacgatcacgagcgcagaatctcccactccctc
tacggtggcctggaaggcctcgatgacgacttgatgccacgtcaaggaatgattccacgc
acaataggaaactatcagctctctctgaccgtcaacatgccgcaggacgacaccgtgatc
atcgaggacgaccgcccgccgctcctgccgtccaacatgtccgaccagtcctcgtccagt
tcccatgacgatgtgggcttcgtggctgatgtgactccgccgtgggccaaagagctgcct
gctcacaacgaaagcgctctgagtccagatgaaaacaatccggacgtctcgttccaaagg
gaaggtttcggacgccagagcatgtcggagaaacgcaccaagcagttcggagacgccgct
cagctcgagatcatcaagacacgcaagtccaagagcatggatctagtagccgacgagatt
aacctcactcctcgccccgacaccgacgcaggttcttccactaaggacgttggaccttca
ctgggcctcaagaagtccagctctctagagagcctccagacggcggtagcagaggtcacc
ctgaacggtgacctcccgttccaccggccgcgccctcgcatcatcagggggcggggctgc
aacgagagcttccgggccgccatcgacaaatcctacgaccggccagccgccttggaggac
gacgacgagggcatggagactttggaggaagacacggaggagagttcccgatctgggaga
gactctgtctccaccatggcggaccagacgccgctgtccgccggccccgaaaagcctctg
gtcaacggcaccaaccgcaccaaggaggagaagaagaaggacaaagacaaaccggggaag
gagaagaagaaacaagatggagggaaggaaaaggataaagagaagggaaaaccaaagaag
ggaatgctgaagggacttggagacatgttcaggtttgggaaataccgaaaagatgagcgg
ccagcggagaagatggaccggaaaggatcgagcaagtggaggaccgaggagactcaggtt
tctgatgaggaaacgatgaagatgaggatggagcaagagaggattcaagccaagacgagg
gagctgagggaacgccaagcccgggaacgggactacgcggagatcttggacgtcagccgc
ccgttggatagatcctctgaggaggatcacacctactccggcgtgaaccctctgaacatg
gacagcagtcacagccgggctcacagcccccgtgacgaatattcccacgttcatcaccag
caccagcactctgactctctctactcgccggtcagccgggcccgaaatgaccggcctcca
tccacagacagcaaccggctaactcctagcaaccacgaccggatacagaggctgcggcag
gagttccagcaggcccagaacgttcccgacgacccggacgatcgcaggaggacctacagc
ttcgagcagtcctggtccaactccagcagcaacggtccgggcgggtacagccagccgggc
cggcactcggtgtcggtggaggtccagatgcagaggcagaggcaggaggagagggactcg
ttcgcccaggcgcagcggcagtacagctccctccctcgacaacccaggaagaatcccagc
accgtctcccaggactcctgggacaaggcgtacccacctggagacgtcttccagacggcc
aaagacaacccccggtactccagctaccagggctcccggaacggctaccagggcggtggc
ggcggcggggcaggagtgaacgctagagtcctgctggaggcccaagagctgctgcggcag
gagcagaggcgcagggagcaggaagccaaaggaaaaatgctgcaggaaggcagcaggacc
agcgcctacgaggggtacaacccccacctgaaggagccggggtcgccgaagggcccgtac
cgacacgacgtcccgccttcgccatcgcagctagctcggctcaacagactggggtcagaa
aagggaagacttttttattcctga
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integrated database retrieval system
