Xiphophorus hellerii (green swordtail): 116721625
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Entry
116721625 CDS
T07363
Name
(RefSeq) vesicle-trafficking protein SEC22b-like
KO
K08517
vesicle transport protein SEC22
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04130
SNARE interactions in vesicular transport
xhe04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
116721625
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116721625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116721625
Membrane trafficking [BR:
xhe04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
116721625
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
RIFIN
Sec20
DUF3785
Motif
Other DBs
NCBI-GeneID:
116721625
NCBI-ProteinID:
XP_032421388
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Position
6:complement(3783452..3786799)
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AA seq
215 aa
AA seq
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MIFLTVIARLADGLPLAASIQEDEQSGRDLQHYQSQAKQLLRKLDAQSPDRCMLEAGNMN
FCYFISQGVCCLCLCDASFPKKMAFGYLEDLHNEFCEQYGKRVPAVTRPYSFIEFDTYIQ
KTKKSYVDSRARRNLSSVSTELQDVQRIMVANIEEVLQRGEALSALDTKASNLRSQAEKY
RSDARFLNTRSTYAKVAAVVLVFVTLIIYVRFWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcctgacggtaatcgctcggctggcggacggtctgccgctggctgcgtccatc
caggaagatgaacagtcaggaagagacctccagcactaccagagtcaggctaagcagctg
ctccggaaactcgacgctcagagcccggaccgctgcatgctggaggctgggaacatgaac
ttctgttacttcatatcccagggcgtttgctgcctgtgtctctgtgatgcctctttcccc
aaaaagatggcttttgggtacctagaggacctccacaatgaattctgtgagcagtacgga
aagagagtccctgcagtgacgaggccatactccttcatagagtttgatacgtacatccag
aaaacaaagaagtcttacgttgacagcagggctcggaggaacctgagcagcgtcagcacg
gagctgcaggacgtccagagaattatggtggcaaatatcgaggaagtcctgcagagagga
gaagctctttctgctttggacaccaaggccagcaacctgcgcagccaggccgagaagtac
cgcagcgacgccaggttcctcaacacccgctccacctacgctaaagtcgctgccgtggtt
ttggtcttcgtgacgctcatcatctatgtgcgcttttggtggctttga
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