Xiphophorus hellerii (green swordtail): 116721673
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Entry
116721673 CDS
T07363
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent R-type calcium channel subunit alpha-1E-like
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04010
MAPK signaling pathway
xhe04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116721673
04020 Calcium signaling pathway
116721673
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116721673
Ion channels [BR:
xhe04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116721673
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
DUF2755
Motif
Other DBs
NCBI-GeneID:
116721673
NCBI-ProteinID:
XP_032421432
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All DBs
Position
6:complement(17513641..17574889)
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AA seq
2394 aa
AA seq
DB search
MLTSSNQSLSLSFTPTLHSPSHRGHAHVQSSLSLPEPEDWRRPIPSARPGLAQGARSCSL
QVPHGGPENIGLPPRAASFDVPYSQDDGSSDQGSGSLSPHAALRRRGGLVEQKDIIMAHQ
AHKIQSTPQARRKEWEMARFGDESAPATVDSGDGDLERGGDGQDAASGGLTASMKQAKAQ
RARTMALYNPVPHRQNCLTVNRSLFIFAEDNIIRKYARRIIEWPPFEYMILATITANCVV
LALEQHLPGEDKTPMAKRLEKTEPYFIGIFCFEAGIKLVALGFVFHKGSYLRNGWNVMDF
IVVLSGILATAGAHMNIPVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMIPLLQIG
LLLFFAILMFAIIGLEFYSGKLHHTCLPSDDIFDNETVDSSELAFACGVRKCPEKYDCND
TWIGPNDGITQFDNILFAVLTVFQCITMEGWTAVLYNTNDALGITWNWMYFIPLIIIGSF
FVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQVERELNGYRAWIDRAEEVMLAEENK
SSGRSPLDVLKRASKKTGARRGAPGSDKYTDMSTASMSRSRMNFRSGRRGPAAYLRRKER
MLRISIRRMVKTDTFYLMVLSLVALNTICVAIVHHDQPDWLTIILYYAEFVFLGLFLAEM
FLKMYGLGFRLYFHSSFNCFDCGVIIGSIFEVVWGFFRPGMSFGISVLRALRLLRIFKIT
KYWASLRNLVVSLMSSMKSIISLLFLLFLFTVVFALLGMQLFGGRFIFEDYTPTNFDTFP
AAIMTVFQILTGEDWNEVMYNGIRSQGGVQYGMWSSIYFIVLTLFGNYTLLNVFLAIAVD
NLANAQELTKDEEEEEEFFNQRYARGRDGLISDGRRRPYLYRKRAIHRGRPNFPEDPDCA
AGPPDEQPLNGTRAFANRRERRRKVNMSVWEQRANQLRKRRQMASREELFGAPTEDNTET
PSIPKHVPAISPETSPAHLPESPMSVKMPLPEPPMSVSIPMPEPPAAEPLVNLSEEKTAG
ANHRTAGGGRHRMARKFRSSQGPEEGARHRRHRHREARVEAKSLDCTQTPREVLHIRRSL
SQERKTIAEREEKEDREESERTEGEGGQQNNAQIEEDDGTCIVNPYAEIGEECRRDGPSS
NIPDPPQCTWSKQGEGGCRDQYESLSQNMSMDPALEGKEYTVSTIESEKRKISIKRDKSN
PEGSVAIEMSSQPLLELTPVSENSKELEAYQSDEKEEETEDEEPPMPPKAVAPDSMFIFK
ASNPIRRICHYVVNLRYFEMTILLVIVASSIALAAEDPVCTNSDRNKVLRYFDYVFTGVF
TFEMIIKMIDQGLILHDGSYFRDMWNLLDFIVVVGALIAFALTNVMGNNKGRDIKTIKSL
RVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYQLFMFIFAVIAVQLFKGKFFF
CTDSSMKTEKECRGFYIDYSRDKKEVKRREWRRHEFHYDNVCWALLTLFTVSTGEGWPQV
LQHSTDVTEENMGPSRGNRMEMSVFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMIQEC
SLEKNERACIDFAISAKPMTRYMPQNRQTFQYRLWHFVASPSFEYTVLVMIALNTVALMM
KYHSAPTAYDAVLKHLNTAFTVLFSMECILKIMAFGFVNYFRDTWNIFDFITVLGSITEI
IVDLQSVNTINMSFLKLFRTARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFI
YAIIGMQVFGNIKLNDESHINQHNNFKTFFSALMLLFRSATGESWQEIMLSCLSGQECEP
DPSIAPLTMSPDHEGGCGTDFAYCYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILG
PHHLDEFVRIWGEYDRLACGRIHYTAMYEMLTHMSPPLGLGKKCPAKIAYKRLVLMNMPV
DEDMSVHFTSTLMSLIRTALDIKIARGGEDRIALDAELQKEISIIWPYLPQKTLDLLVPI
NKGQPLTIPDMTVGKIYASMMIMDYFKQNKAKKLRQQLEAQKSNLIFKRLDASTLPEDIL
SNTTSLPMMAHSAGSALTRGGFVALSPISPQELFLQPVSSDTDAGQQQNVVGECIWGIKI
PLELPLGRGLCVRASSMPRLAVESQQEEAKGGSMKRSVSTVADQRVNGLWEEEKSPERVY
RPRHKSYKAAVSRSEHRERGRSKEHCHLLSPDMSRCNSEERSLQPSRSSSVERALPQDKQ
GNSSDSPVPSTSESSTPSGRRPLSQTPTRSRPHISYSPLVCRTQASVGEDDDEQGSPETT
RRSKASWEPQEGAAGGRRSQLDINASPPRRYPSEPFLASQEDDHSPDPSGPMETLTFEAA
VACSLGRSNTIGSAHPRWRTGWQVPNGHFRKRLMQTASAAGCDPLSDTEEDDRC
NT seq
7185 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccagttccaaccagtccctctccctttccttcacaccaactctccactctcca
tcacaccgtggacacgctcatgtccagtcctccctgtccctgccggagcctgaggactgg
aggaggcccatcccgtctgcccgtcctggcctggctcagggggctcgctcctgctccctg
caggtcccccacggcggtcctgagaacattggcttgccccctcgtgcagccagttttgac
gtgccctacagtcaggatgacggctcgtctgatcagggctcggggtccctcagccctcac
gctgcactgcggcggcgcgggggtcttgtggagcagaaggacatcattatggcccaccag
gctcacaaaatacagagcacaccacaagcccgcaggaaggagtgggaaatggctcggttc
ggagacgagtccgctcccgccacggtggactccggggatggcgacttggagcgcggtggc
gacgggcaggacgccgcgtccggcgggctgaccgcttccatgaagcaagccaaagcgcag
cgggcccggaccatggctctgtacaaccccgtccctcaccggcagaactgcctcaccgtc
aacaggtcgctctttatatttgcagaggacaacatcattaggaaatatgcgaggcggata
atagagtggccgcctttcgagtacatgatcctggctaccatcactgctaattgtgtcgtc
ctggccttggagcagcacctccctggagaagataagacccccatggcaaagaggctggag
aagacagaaccttactttattgggatattctgctttgaggccgggatcaagctggttgcg
cttggttttgttttccataaagggtcctacctgaggaatgggtggaatgtcatggacttt
atagtcgttctcagtgggatcctggccaccgctggagcccacatgaacatccctgttgat
cttcggaccctgagggctgtgcgagtcctaagacccctcaagctcgtctctgggataccc
agtttacagattgtgctgaagtcgattatgaaggccatgatcccactgcttcagatcggc
cttctcttgttctttgccatcctcatgtttgcaatcattggcctggagttctacagtggg
aaactacatcacacctgcctcccatcggatgacatttttgataatgagactgttgactca
tcagagttggcatttgcatgcggcgtgaggaaatgtccggaaaagtacgactgcaacgac
acctggattgggcccaatgacggcattacgcagtttgacaacattctatttgctgttctc
accgtcttccagtgcatcaccatggagggctggacagctgtgctttataatactaatgat
gctctgggtatcacatggaactggatgtacttcattcctctcatcattattggctcattc
tttgtgttgaatcttgtgctgggagttctgtcaggagaatttgccaaggaaagggagagg
gtggagaacaggagagccttcatgaagttacgtcggcagcaacaagtggaaagagaactg
aatggctaccgagcctggatagacagggcagaggaagtcatgcttgcagaggagaataaa
agttcaggcagatccccattagatgtgctaaaacgagcaagtaaaaagacaggtgcacgg
agaggcgcaccaggaagtgacaagtacacagacatgtccaccgccagcatgtcaagatca
agaatgaactttcgcagcggccgtcgtggcccagctgcctacctgcgacgtaaagagcgc
atgctgcgcatttccatccgccgcatggtgaagacagacacattctatttgatggtcctc
agtctggtggctctcaacaccatctgcgtggccatcgtgcaccatgaccagcctgactgg
ctgaccatcatcctctactatgcagagtttgtgttcctggggctgtttctggctgagatg
tttttgaaaatgtacggtctgggtttccggctctacttccattcatctttcaactgcttt
gactgtggggtcattatcggcagcatctttgaggtggtatggggcttttttaggcccggc
atgtcgtttggtatcagtgtactgagagcgctgagacttctgagaatattcaagatcacc
aagtactgggcttctctcaggaacctggttgtttccctgatgagctccatgaagtccatt
atcagcctgctttttcttctctttctcttcactgtggtgtttgcactgctcgggatgcag
ctttttggagggaggttcatctttgaagattacactcccaccaactttgacacgtttcca
gctgccatcatgacagtgtttcagattctgactggtgaggactggaacgaggtgatgtat
aatggaatccgctcacaaggaggcgttcagtacggcatgtggtcatccatctacttcata
gtgctcactctgttcggtaactacacactgcttaatgtcttcttggctatcgctgtggat
aatttggcaaacgcacaggaactaaccaaggatgaagaggaagaagaggagttcttcaat
cagagatatgcaagaggaagagacggcttgatatcagatggcagaagaaggccctaccta
tacagaaaacgtgcaatccatagagggcggcccaatttcccagaggacccggactgtgca
gcggggcccccagatgaacagccccttaatggcaccagggcctttgctaaccgccgggag
aggagaagaaaagttaacatgtctgtgtgggagcagagagccaaccaactacgcaaacgt
cgtcaaatggcaagcagagaggaattgtttggcgctcctacagaagacaacactgaaact
ccctctattcccaaacatgtccccgccatctccccggagaccagcccggctcacctgccc
gagtctcccatgtcagtgaagatgcccctacctgagcccccaatgtccgtctctattccc
atgccggagcctccagctgctgagcctctcgtcaatttgagtgaggagaaaacagcagga
gcaaaccaccggaccgccggcggcgggaggcaccggatggcccggaagttcaggtccagt
cagggaccagaagaaggagcccgccacaggcgccaccgtcaccgagaagcccgggttgaa
gccaaaagtctggactgcacacagaccccacgcgaggttctacatatcagacggtcgctc
agtcaagagaggaagactattgctgaaagagaggagaaggaagacagagaagagagtgag
agaactgaaggagagggaggacaacagaacaatgcacagatagaggaagatgatggaaca
tgcattgtcaatccatacgcagaaatcggggaagagtgcagaagagatggacccagcagc
aatattcccgatcctccacagtgcacctggtcaaagcagggagagggtggctgcagggat
cagtatgaatccctgagccagaacatgtcaatggaccccgctttagagggaaaagagtac
actgtgagtaccatcgagtcggagaaacgcaagatatccatcaagcgtgataagtccaac
ccagagggaagcgtggccattgaaatgtcttcacagccccttctggagctcactcctgtg
tcagagaacagcaaagagttggaggcgtaccagtctgatgagaaagaggaggaaacagag
gatgaggaaccaccgatgcctcccaaagccgtagcgcctgacagcatgttcatcttcaaa
gcctccaaccccatcaggaggatctgtcactatgtggtcaatcttcgctactttgaaatg
accatcctccttgtgattgtggcaagtagcatcgcgttggcagcagaggaccctgtgtgc
acaaattcagacagaaacaaggtgctgcgatattttgattacgtcttcactggagtgttc
acctttgaaatgatcataaagatgatagaccagggtctcattctgcatgatggctcctat
ttccgagacatgtggaacctcctggacttcattgtagtggtgggagctctgatcgccttt
gcgctaacgaatgtgatgggaaacaacaagggccgagacatcaagacaataaagtccctc
cgagttctgagagttctgcgacctcttaaaaccatcaagaggcttcctaaactcaaggct
gtttttgactgtgtggtcacgtctctaaagaacgtcttcaacatcctcattgtgtatcag
ctctttatgttcatctttgctgtcatcgcggtccagctctttaaggggaagttcttcttt
tgcactgacagctccatgaaaacagaaaaggaatgtcgaggcttctatattgactacagc
agagacaagaaagaggtcaagagaagagagtggaggagacacgagtttcactacgacaac
gtctgctgggccctgctcacgcttttcactgtgtcgactggagaagggtggcctcaggtc
cttcaacactccaccgatgtcacagaggagaacatggggccaagtcgcgggaaccggatg
gaaatgtccgtcttctacgtggtctactttgtggtctttccgttcttcttcgtcaacatc
tttgtggctcttatcatcatcaccttccaggagcagggcgataagatgattcaggagtgc
agtctggagaagaatgagagggcttgcattgactttgccatcagtgccaagccgatgacc
cgctacatgccccagaacagacaaactttccagtacagactctggcactttgtggcatct
ccttcttttgagtacacggtgcttgttatgattgccttgaacacagttgctctcatgatg
aagtaccactccgccccaacagcgtatgatgccgtcctgaagcacctaaacacagccttc
acagtgctgttctccatggagtgtatactgaagataatggcttttggatttgtgaactac
tttcgagacacttggaacatttttgactttatcactgttcttggcagcatcacggaaata
attgtggacttgcagtcggtgaacaccatcaacatgagtttcctgaagctttttcggaca
gccaggctgatcaagctgctgagacagggctacactatccgcattctactttggacattt
gtacagtcctttaaggctctaccgtatgtctgccttcttatcgccatgcttttcttcatc
tatgccataattggaatgcaggtgttcggaaacatcaagctgaatgatgagagtcacatc
aatcagcacaacaattttaagacctttttcagtgcactgatgcttctgttcaggagtgca
acaggggagtcctggcaggagattatgctctcctgtctgtctggacaagaatgtgaacca
gatccctccattgctcccctcaccatgtctccagaccacgagggtgggtgtgggactgac
ttcgcttattgctactttgtctccttcatcttcttcagctcttttctgatgctgaatcta
tttgtggctgtgattatggataactttgagtatttgacacgagactcctctattctgggc
cctcatcatctggatgaatttgtccgcatatggggcgagtatgatagactggcatgtggg
cgtattcactacacagctatgtacgagatgttgacacacatgtctccgcctctgggcttg
ggtaaaaaatgccccgctaagatcgcctacaagaggttggtgttaatgaacatgcccgtg
gatgaggacatgtctgtccacttcacttctactctaatgtcactgattcgcacagctttg
gatatcaaaatagctcgaggtggggaggaccgcattgctctggatgccgagctgcagaag
gagatcagcatcatttggccttatctgccgcagaagaccttggatctcctggttcctatc
aacaaaggtcagcctctaactatacctgacatgacagtggggaagatctatgcttcaatg
atgataatggactacttcaaacaaaacaaagcaaaaaagctaaggcaacagctggaagct
cagaaaagcaacttaatatttaaacgtctggatgcctccaccctacctgaggacattctg
tccaacaccacttcactgccaatgatggctcacagtgcgggttcggccctaaccagaggg
ggctttgtggctttgagtcctatctcaccccaggagctatttttgcagcccgtaagctca
gacactgatgccggtcagcagcagaatgtggtgggcgagtgcatttggggcattaaaatc
ccattggagcttccacttgggagaggcctttgtgtgcgggcctcctctatgccgcgtctg
gccgtagagtcgcagcaggaagaggctaaaggtggctccatgaagcgatcagtctccacg
gttgcagatcaacgtgtaaatggtctctgggaggaggagaaaagcccagagagagtgtac
cgacctcgacataaaagctacaaggctgctgtgtcacggtctgagcacagggagcgaggt
cgttccaaggaacactgtcacctgttgtctccagacatgtctcgttgtaactcagaggaa
agaagcttgcagccctcacgttcctccagcgtagaacgagcccttccccaggataaacag
ggtaacagctcagacagcccagtaccgtccacctcagagtccagcacacccagcggccga
cgacctctctcacaaaccccaacccgatctcgccctcacatttcctattcccctcttgtg
tgtcgcacacaagcctctgtcggagaggatgatgatgaacaaggcagcccagagaccaca
agacggagcaaggcctcatgggagccccaagaaggagctgctggaggaaggcggagtcag
cttgacataaacgcgtccccgcctcgacgctacccttcagagcctttcctggcttcacaa
gaagatgaccacagcccggatccctctggtcccatggagacgttgaccttcgaggcggcc
gtggcctgcagcctgggacgctcaaacaccattggctcagcccacccacgctggcggacc
ggctggcaggtccccaacggacacttcaggaagcgtctcatgcagacggcctccgctgca
ggctgcgaccccctcagcgacacagaggaggacgacaggtgctag
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integrated database retrieval system
