Xiphophorus hellerii (green swordtail): 116721698
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Entry
116721698 CDS
T07363
Name
(RefSeq) polypyrimidine tract-binding protein 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116721698
Spliceosome [BR:
xhe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
116721698
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
116721698
NCBI-ProteinID:
XP_032421480
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All DBs
Position
6:complement(10950761..10965125)
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AA seq
523 aa
AA seq
DB search
MDGDVAVGVKRGSDELNMYSSSPNSMTANGSDSKKQRLDESPPSRVLHIRKLPNEVTETE
VIALGLPFGKVTNILMLKGKNQAFLELGTEEAAITMVNYYTAVTPQVRNTPVFIQYSNHK
ELKTDSALNQRAQAVLQAVSAVQDGSSPSSDQGVLELAPPPSPVLRIIIDNMFYPVTLDV
LQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLRIDFSK
LVNLNVKYNNDKSRDYTRPDLPTGDGESTNKDHSLLGTPSGALASYSSGGGYSSSLSLSQ
GGGAISPLSAAAAAAAAAGRVALSGSGVSGVLLASNLNEEMVTPQSLFTLFGVYGDVQRV
KILYNKKDSALIQLSDGNQAQLAMSHLNGQKVFGKVMRVTLSKHQTVALPREGLDDQLLT
KDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNIRDGVGEDDLRRLFSNSGGTVKAFKFF
QDRKMALIQMSSVEEAIQALIDLHNYDMGGNHHLKVSFSKSTI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgatgttgcagttggtgtgaagagaggctcagatgagctgaacatgtatagt
agcagccccaactcaatgacagcaaacggtagtgacagtaagaaacagcgcctggacgag
tcccctccctccagagtgctccacatccgaaaacttcccaacgaagtgacagagacagag
gtcattgctctcggcctgccctttggaaaggtcaccaacattctgatgctgaagggaaaa
aaccaggcatttctagagttgggtacagaggaagcagccatcactatggtgaactactac
acagctgtaacaccacaggtcagaaatactcctgtcttcatccaatattctaaccataaa
gaactgaaaacagattcagctctgaaccagagagcccaggcagtcctgcaggcggtgtca
gctgtccaggatggcagctctccatcctctgaccagggcgtattggagctcgctccgccc
cccagccctgtgctgcgaattattatcgacaacatgttttatcctgtaacactggatgtt
ttacaacagattttcagcaagtttgggacagttatgaagattataaccttcactaagaac
aaccagtttcaggctcttctgcagttcagtgacccagtcaatgctcaacaagctaaactg
tctttggatggacagaacatctataattcgtgctgcactctgcggatagacttcagtaaa
ctggtcaacctcaatgttaaatacaacaatgataaaagtcgtgattacaccagacccgac
cttccgacaggagatggagagtcaaccaacaaggatcattctttactgggtaccccgtct
ggagctctagcttcctactctagtggaggaggttactcatcatctctctccctctcacag
ggtggaggagccatcagtcccctgagcgctgcggcggcggcggcggctgcggcaggtcgc
gtcgctctctctggatccggagtgtcaggtgtcctgttggcgtccaacctgaatgaagag
atggtcacgcctcaaagtctctttaccctcttcggcgtctatggtgatgtccagagggtg
aagatcctctacaacaaaaaggacagcgctctgattcagctttctgatggcaaccaggct
caacttgcaatgagccacctgaatggtcagaaggtgtttggtaaagtgatgagagtgact
ctgtcgaaacatcagacggtagctttgcccagagaaggcctggacgaccagttactcacc
aaagatttttctggctcccccctccatcgctttaagaaaccaggatctaaaaacttccag
aacatctttcctccatctgcaacacttcacctctccaacatcagggatggagtcggagag
gacgatctacgccgcctgttttccaacagcggaggaaccgtcaaggcctttaagtttttt
caggaccgtaagatggcgttgatccagatgtcgtcggtggaggaggcgattcaggctctg
attgaccttcacaactatgacatgggaggaaatcaccatcttaaagtttccttttcaaag
tccaccatctaa
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