Xiphophorus hellerii (green swordtail): 116721704
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Entry
116721704 CDS
T07363
Symbol
casc1
Name
(RefSeq) protein CASC1
KO
K17580
cancer susceptibility candidate protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116721704 (casc1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xhe03037
]
116721704 (casc1)
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116721704 (casc1)
Cilium and associated proteins [BR:
xhe03037
]
Motile cilia and associated proteins
Dynein arm
116721704 (casc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Casc1_N
Casc1_C
Motif
Other DBs
NCBI-GeneID:
116721704
NCBI-ProteinID:
XP_032421489
LinkDB
All DBs
Position
6:complement(13033957..13043292)
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AA seq
703 aa
AA seq
DB search
MTKAERLKKQQEEEEAARLQAEKEEQERLERQRKLEEIQRLEEKAEQNRDLELTELRLLL
EENYSAIIKWKVDAAEKAEWERYMLCDGVPDAKDQRAVNTFVTLWKDYSDSNIGEELQLC
NSAVKLIEDLDELVKEAKDPELVPKYHDALIEVQEILHAKHLFIAEKLLKGASDNIDPDT
RNMQTVSKHTNVTLCLWANLFKNPSFTGFDFNEAGLSFKLPEELAVSDIAVRILHTHYDH
LSILSRLRHAPQKPIVEEIPPPVQEPEETQDGDCTSELPSSRHSPTSEPSIKSTSPPSSE
ESMIPTQTEVLSGHSSSLVSSVCPTKDPSWPSLAQLNCLSSAGPEFEETENDSEVVNLVQ
YTTLGGVFYYDLLQLPPQPIRRKGYTILQMVDGLKVFPYPTERPKNEECPDDPTEAPNNE
PCSPVGVCVVLPEWVIFMEMPLVARWDAEDGRWRKDGITNVSYEEAEGKISFEMESFQIF
TLMHNTFANFPFQGWELRPLGQNSAVFTVKGALIEVSITIKNSQCMLRLAHSRGLSHLVG
QWMSAPALQKAMLKAGINIFVNENTHKYVSVCKKNPLIEQFAYDQMALFASACAFKWSKW
NATCGEENLVLQGSEHLKICLVPEDSWSTYFMGSQRTRQLEITENSKDFSIDHAAGSEFH
STLIHLLQDSMSPDGLALVRQSHYCFIDTVQTLLSAIRPLVFS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcagagaggttaaagaagcagcaagaggaagaagaggcagcccggctgcaa
gccgaaaaagaagaacaggagagactggaaagacagagaaagctggaggagatacaaagg
ctagaggaaaaggcagagcagaacagagacttggagcttaccgaactgcgccttctgctg
gaggaaaactactctgcaataatcaaatggaaggttgatgctgcagaaaaggcagagtgg
gagagatacatgctttgcgatggagtcccagacgcaaaggaccagcgggcggtcaataca
tttgtcaccttgtggaaggattactcagactccaacattggagaggagcttcaactatgc
aactcagcagtaaagcttattgaagacttggatgagcttgtgaaagaggccaaagaccca
gagttggtcccaaagtaccacgatgctctcatagaggtccaggagattctccatgctaag
caccttttcatagctgagaagctcctaaagggagcaagcgacaacattgaccctgacaca
aggaacatgcagactgtgtccaaacatacaaacgtgacgctgtgtctctgggccaacctt
ttcaaaaatccaagctttacaggtttcgactttaacgaagctggcctgagctttaagctt
cctgaggagctggctgtgagcgacatcgccgtgcggatcctccacacccactatgaccac
ctgtcaatactgtccaggctcaggcatgcacctcagaagccgatagtggaggagattccg
ccgcccgtccaggagccagaggaaacccaggatggtgattgcaccagtgaactgcccagt
tcccgccacagtccaaccagtgaaccgtccataaaaagcaccagcccgccatcttcagag
gaaagcatgatacctacacagacagaagtactcagtggtcacagttccagcctggtttca
tctgtttgtccaaccaaggatccatcttggcccagcttggcacagctgaactgcttgagt
tccgctgggcctgaattcgaagagacagaaaatgactcagaggttgtaaatctggttcag
tacacaaccctgggtggagttttctactacgatctgcttcaactcccacctcagcctatc
aggaggaaagggtacacgatactgcagatggtggacgggctgaaggtgttcccttaccca
acagaaaggcccaagaatgaggaatgtcccgatgacccaacagaagcacccaacaatgag
ccgtgctcccccgttggggtgtgcgttgtgcttcctgagtgggttatcttcatggaaatg
ccacttgtggctcgctgggatgctgaagatggccgctggcgaaaggatggcatcaccaac
gtctcctacgaggaggcagaaggcaaaatctcctttgagatggaatcattccagatcttt
acactgatgcacaacaccttcgccaactttcctttccagggctgggagctgcggccgctg
ggccaaaactcagctgtttttactgtcaagggggctctcattgaggtctccatcaccatt
aagaatagtcagtgtatgctgcggctggcgcacagtagaggcctctctcacctcgtgggg
cagtggatgagcgcaccagctctgcagaaagccatgctcaaggcagggatcaacatcttt
gttaacgagaacacacacaaatacgtcagtgtctgcaagaagaacccacttatagaacag
tttgcttatgaccagatggccctctttgcatcagcttgtgcttttaaatggagcaaatgg
aacgccacatgtggagaggagaatctggtccttcaggggtctgagcaccttaaaatctgc
cttgtacctgaagactcttggagtacttactttatgggttcacagaggacaaggcaactg
gagatcactgagaacagtaaagacttttccatagaccacgcagctggcagcgagttccac
tccacactcatccatcttctgcaggatagcatgagccctgatgggttagctttggtcaga
cagtcccattactgcttcattgacactgtgcaaaccctgctttctgctattagacccctg
gttttttcataa
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integrated database retrieval system
