Xiphophorus hellerii (green swordtail): 116721743
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Entry
116721743 CDS
T07363
Symbol
rnf2
Name
(RefSeq) E3 ubiquitin-protein ligase RING2
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116721743 (rnf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116721743 (rnf2)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116721743 (rnf2)
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116721743 (rnf2)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116721743 (rnf2)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
116721743 (rnf2)
Noncanonical PRC1 (PRC1.1)
116721743 (rnf2)
Noncanonical PRC1 (PRC1.3/1.5)
116721743 (rnf2)
Noncanonical PRC1 (PRC1.6)
116721743 (rnf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-Nse
zf-RING_5
zf-RING_4
zf-RING_6
zf-rbx1
zf-UDP
TRAF3_RING
zf-C3HC4_5
CAMSAP_CC1
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
116721743
NCBI-ProteinID:
XP_032421542
LinkDB
All DBs
Position
6:1830384..1879050
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AA seq
342 aa
AA seq
DB search
MTQTLQTNGVQSLSKTWELSLYELQRTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKN
TMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY
EAHQERVLARISKHNNQQALSHSIEEGLKIQAMTRLQRGKRHTVENGSGAEDNGDSSHCS
NASVHSNQEAGPSIKRTKTSDDSGLDMDNAAENGGGDSVIDGGASEIELVFRPHPTLMEK
DDGHNSVEFVPRYIKTSGNATVDHLSKYLAVRLALEELRRNAEASPVNVEAASEKQYTIY
IPTAGNQFTVLNGSFSLELVSEKYWKVNKPMELYFAPTKEHK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgactcagacacttcagacgaatggggtccagtccctcagcaagacttgggaactaagt
ctctatgaactacagagaacaccacaggaggcaataacagacggactggagatagctgtg
tcacccaggtccttacacagtgaacttatgtgtcctatctgtctggacatgttgaaaaac
acgatgacaaccaaagaatgtctgcaccgcttctgcgctgattgtatcatcacagctttg
agatctgggaataaagagtgccctacctgccgtaagaagcttgtttctaagaggtcactc
cgtcctgaccccaattttgatgctctgattagtaagatttatcccagccgagatgagtat
gaagcccaccaggagagagttttggctcgcattagcaaacacaacaatcagcaggctttg
tcccacagcatagaagaggggctgaagatacaggcaatgaccaggctacagcgtggcaag
aggcacacagtggaaaacggtagcggagctgaggacaacggagactcctctcactgtagc
aatgcgtctgtccacagtaatcaggaggcaggaccgagcattaagcgcaccaagactagt
gatgacagcggtttggacatggacaatgctgctgagaatgggggaggagactctgtgatt
gatggaggagccagtgaaatagagctggtgtttaggccacaccccaccctgatggagaag
gatgatggtcataacagtgtggagtttgttcctcgttacattaagacctctggtaacgcc
actgtggatcacttgtctaaatacctggcagtccggctggctctggaggaactgagaaga
aatgctgaggccagtcctgttaacgttgaagcagcatcagagaaacagtatactatctac
atacctactgctggaaaccagtttactgttctgaatggttccttctccctggagctggtc
agtgaaaagtactggaaggtcaacaaacccatggagctctactttgcccccactaaagaa
cacaagtaa
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integrated database retrieval system
