Xiphophorus hellerii (green swordtail): 116721751
Help
Entry
116721751 CDS
T07363
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116721751
04121 Ubiquitin system [BR:
xhe04121
]
116721751
Enzymes [BR:
xhe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116721751
Membrane trafficking [BR:
xhe04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116721751
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116721751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
HypA
DUF7560
C1_2
zf-RING_16
DZR
Motif
Other DBs
NCBI-GeneID:
116721751
NCBI-ProteinID:
XP_032421555
LinkDB
All DBs
Position
6:complement(12718291..12724348)
Genome browser
AA seq
313 aa
AA seq
DB search
MAEAPPRPSRFFCHRCSAEISPRLPDYTCPRCESGFIEELPEEPSSSENGCASTSSASDQ
NRSSFENMDQHHLFTFPSGYGPFALGIFDENFDLRSRLSTEDNREAENRREREMASRQRY
SARQPRGRHVPRRQGSRHEGVPTLEGIIQQLVNGIIAPAAMPNTGMGPWGMLHSNPMDYA
WGANGLDAIITQLLNQFENTGPPPADKERIKSLPTISITQEHVGAGLECPVCKEDYSVDE
SVRQLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTATDPPVLSGINFSPPSSSSSSS
PSSPSNENAGSNS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagcccctccacggcccagccggtttttttgtcaccggtgttcagcagagatc
tcgccccgtctaccggactacacatgcccacgctgtgagtctggtttcattgaggaactg
cctgaagaaccaagcagttctgaaaatgggtgtgcgtccacgtcctctgccagtgatcag
aatcgctccagctttgagaacatggatcaacatcatttattcacatttccatcggggtac
ggcccattcgcccttgggattttcgacgaaaactttgaccttcgatcgagattatccaca
gaggacaaccgggaggcagagaacaggcgagaaagggaaatggcttcacggcagcgatac
agtgcgaggcagccgcggggtcgacacgtaccacgccggcagggttcgcggcacgaagga
gtgcccacattggagggaatcatccagcagctcgttaatggaatcatagcacctgcagcc
atgccaaataccgggatgggaccatggggtatgctacattccaatccaatggactatgcc
tggggggctaatggactggatgctatcattacacagttattaaaccagtttgaaaacacc
ggtcctccgccagctgacaaagaaagaataaagagtttaccgaccatttccattacacaa
gaacacgttggtgctgggttagagtgccctgtctgcaaagaagactacagtgttgacgag
agtgttaggcagctaccgtgcaatcatttgtttcacaatgattgtatagttccatggctg
gagcagcatgacacatgtcccgtgtgcaggaagagtcttagcggtcagaacacggccaca
gacccaccggtgttatcaggaatcaacttctctccaccttcctcctcatcctcttcctct
ccaagctcacctagcaatgaaaatgcagggagcaactcatag
DBGET
integrated database retrieval system
