Xiphophorus hellerii (green swordtail): 116721798
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Entry
116721798 CDS
T07363
Symbol
uba1
Name
(RefSeq) ubiquitin-like modifier-activating enzyme 1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116721798 (uba1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116721798 (uba1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116721798 (uba1)
Enzymes [BR:
xhe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
116721798 (uba1)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
116721798 (uba1)
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116721798 (uba1)
Exosomal proteins of other body fluids (saliva and urine)
116721798 (uba1)
Exosomal proteins of colorectal cancer cells
116721798 (uba1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_UFD
E1_FCCH
E1_4HB
Motif
Other DBs
NCBI-GeneID:
116721798
NCBI-ProteinID:
XP_032421666
LinkDB
All DBs
Position
1:17728655..17745392
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AA seq
1057 aa
AA seq
DB search
MSSSPLSKKRRLSGTETKTGSHCSSSNSVRTDLSHTPANGMAKNGNDAEIDEGLYSRQLY
VLGHEAMKRMQNSNVLISGMRGLGVEIAKNVILGGVRSVTVHDQGVAEWRDLSSQFYLRE
EDLGKNRAEVSQPRLAELNNYVPVTAYTGVLTEDYLTKFQVVVLTNANLDEQKHLGDLCH
NRGIKLVVADTRGLFGQLFCDFGEEMIVYDTNGEQPLSAMISMITKDNPGVVTCLDEARH
GFESGDYVTFTEIQGMTDLNGCQPVEIKVLGPYTFSICDTTGFSDYVRGGIVSQVKMPKK
ISFKSISSSMAEPDFILTDFAKFDRPGQLHIGFQAIHAFKQKHSRLPTPWSQADGDELLT
LAKELNSAQTGSAKAEQLDEALIKKMSYLAAGDLSPVNAFIGGVAAQEVMKASTGKFMPV
MQWLYFDALECLSEGEEVMLTEEECSPRNCRYDGQIAVFGSKLQKILADQRYFLVGAGAI
GCELLKNFAMIGLASEEGEVIVTDMDTIEKSNLNRQFLFRPSDVTKMKSDTAAAAVKQMN
PSFKITAHQNRVGPETERVYDDDFFESLNGVANALDNVDARMYMDRRCVYYRKPLLESGT
LGTKGNIQVVIPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQAP
ENSMQYLTDTKFMERTLKLPGAQPVEVLDAVYKSVVTDCPHSWADCVAWARNHWQCQYSN
NIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLDFSTSNDLHVDYVLAGANLFAQTYGLQG
STDRAGVVKILQDVKVPTFTPRSGVKIHVSDQELQNSNSSVDDSKLEELKSQLPTPESFQ
FKLSPIDFEKDDDANFHMDFIVAASNLRAENYDIPPADRHKSKLIAGKIIPAIATTTAAV
VGLVCLELFKIIQGHKKLDSFKNGFMNLALPFFAFSEPIAAPKHKYYEIDWTLWDRFEVK
GLQSNGEEMTLRQFLDYFKNEHKLEITMLSQGVSMLYSFFMPAAKLKERLDLPMTEIVTK
VSKKKLGKHVKALVFELCCNDLSDEDVEVPYVRYTIR
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctcgccgctgtccaagaagcgtcgcttgtcaggaacagagacgaagacggga
tcccactgctcctcctctaactctgtcagaactgatctgtcccatacacctgcaaacggc
atggctaagaatggcaatgatgctgagattgatgaaggcctgtactccagacaactatat
gtgctgggccatgaagcgatgaagcgcatgcagaactccaatgtcctcatttctggaatg
agaggacttggagtagagattgcaaagaatgtcatcttgggaggagttcgaagtgtcact
gtgcatgaccaaggagttgcagaatggcgagatctctcttcccagttctaccttcgtgaa
gaggacctgggaaagaacagagcagaggtgagtcagcctcgtttggctgaactcaacaac
tatgttcctgtgacagcgtatactggagttctcaccgaggactaccttaccaagttccag
gtggtggtgcttactaacgccaacctagatgagcagaagcatttgggggacttgtgccac
aacagaggaatcaagctggttgttgcagacacgcgtggtctgtttggccaacttttctgt
gactttggagaggagatgatagtgtacgacaccaacggagagcagccactgagtgcaatg
atttccatgatcaccaaggacaatccaggtgtggtaacttgtcttgacgaggctcgccat
ggctttgaaagtggagattatgtgaccttcactgagattcagggcatgacggatctaaat
ggctgtcagcccgtggagattaaagttcttggcccatacactttcagtatctgcgacaca
accggcttttcagattatgtcagaggaggaattgtctctcaggttaagatgcctaagaag
atcagttttaaatccatctcgtcctccatggcggaaccagacttcatattgacagatttt
gccaaattcgatcgtcccggacaactacacataggctttcaggccatccatgctttcaag
cagaagcacagtcgcctccctacaccttggagccaggctgatggtgatgagctgttgact
ctggccaaagagctgaactctgcccagacggggtctgccaaagcggagcagctggatgag
gctcttatcaaaaagatgtcttatcttgctgctggtgatctttcccctgtcaatgccttc
attggtggagtggctgcacaggaagtgatgaaggcatccacagggaaatttatgcctgta
atgcagtggctatactttgatgcgctggagtgcctttctgaaggagaagaggttatgctc
acagaggaagagtgcagccctaggaattgtcggtatgacgggcagattgcagtgtttggc
agtaaactgcagaaaatccttgccgaccagcgctacttcctggttggagctggagccatc
ggctgcgaattgttgaaaaactttgccatgattggtctggccagtgaggagggcgaggtt
atcgtgactgacatggacaccatagagaaatccaacctcaacagacagttcctcttcaga
ccctctgatgtcacgaaaatgaagagtgacacagctgctgctgcagtgaagcagatgaac
ccctccttcaagatcacagctcatcagaacagagttggtccagagacagagagggtctac
gatgacgacttcttcgaaagtctaaatggggtcgctaatgcactggacaatgtcgatgca
cgtatgtacatggatcggcggtgtgtttactatcggaaacccctgctggagtcgggtact
ttgggcacaaaaggcaacatccaggtcgtgatcccctttctcacagagtcgtacagctcc
agccaagacccgcctgagaagtccatccccatctgtaccctgaagaactttccaaatgca
attgagcacacactgcagtgggcccgagacgagtttgaggggctcttcaaacaggcacca
gaaaattccatgcagtacctcacagatactaagttcatggagcgaactctgaagcttcca
ggagctcagcctgtggaggtgctggacgccgtgtacaagagtgttgttacagactgcccg
cacagctgggctgactgcgtcgcctgggctcgcaatcactggcagtgccagtacagcaac
aacatccgtcagctattgcacaacttccccccagatcagctcaccagctcaggcgccccc
ttctggtctggtccaaagagatgtcctcaccccttagatttcagcactagcaacgacctc
cacgtggattatgtattggcaggtgcaaacctgttcgcccagacgtatggcctgcaaggc
agcactgaccgagcaggtgtggtcaagatcttgcaggacgtcaaagtgccaacttttact
cctcgctccggggttaaaatccacgtctctgatcaggagctgcaaaatagcaattcctct
gttgatgactccaaactggaagaactgaagtctcagctgcctacgccggagtcgttccag
ttcaaactcagccccatcgactttgaaaaggatgatgatgcaaactttcacatggatttc
atcgtggcagcctccaatctgagagcagagaactacgacattccacctgctgacaggcac
aagagcaagctgattgctggcaagatcattcctgctatcgccacgactacagctgcagtg
gttggcttagtgtgcttggagctcttcaagattatccaagggcataaaaaactggattcg
ttcaaaaatggcttcatgaacttagccctacctttctttgccttctctgagcccattgct
gctcccaaacacaagtactatgagattgactggactctttgggatcgcttcgaggtcaaa
gggctgcagtccaacggggaagaaatgacactccgacaattccttgactactttaaaaat
gagcataagttggagatcaccatgctatctcagggagtgtccatgctgtattcatttttc
atgcctgctgccaaacttaaagaaagactggacctaccaatgactgagattgtgactaag
gtgtccaaaaagaagctgggcaaacacgtgaaggccctggtgtttgagctgtgctgtaac
gacctgtctgatgaagacgtggaagtgccctatgtcagatacaccatccgctga
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integrated database retrieval system
