Xiphophorus hellerii (green swordtail): 116721816
Help
Entry
116721816 CDS
T07363
Symbol
dcaf8
Name
(RefSeq) DDB1- and CUL4-associated factor 8
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xhe04121
]
116721816 (dcaf8)
Ubiquitin system [BR:
xhe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
116721816 (dcaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
116721816
NCBI-ProteinID:
XP_032421685
LinkDB
All DBs
Position
6:complement(22151269..22161161)
Genome browser
AA seq
620 aa
AA seq
DB search
MAEADGKSPVLNGGSEEKKPGEEQHKDGDASGSKDSQTQSSSEDAPKETVEASGDKGIPE
AEGETAASREGEEEEEEEDTDSMDGSGLFSFTEDGERESEGGRRERGKEKDRGKRAPRKR
IRPGAGTNHSSSSDDDDDDDDDEPKEEEDDDDDDDVDDEAMESWLGAELHDLRGPTWQAV
PSLRSREIGRNSHQFVRRVCGARGLVQRLELQGRLERHTGCVNTLHFNPSGTRLASGSDD
LRVVIWDWAIRRAELEFDSGHKSNVFQAKFLPHSGDSTLAMCARDGQIRVAELSATQRCK
NTKRVAQHKGAAHKLALEPDSPCSFLSAGEDAVVFGIDLRLDRPANKLVVVKEGDKKVGL
YTIFVNPAKTHQFAVGGRDQYIRIYDQRKINENENNGVLKKFCPSHLVSSESKTNITCLV
YSHDGTELLASYNDEDIYLFDSNHSDGADYRRRYKGHRNNATVKGVNFYGPCSEFVVSGS
DCGHIYLWDKNSARIVQFMEGDRGGVVNCLEPHPHLPGMATSGLDHDIKLWAPTAENPTG
LKGLKEVMKKNKRERDEDSVRHGDQYDTQLLWFLMRHMRNRRPPRARREGADADTDESWS
SPDSSDEEDGGPDHVQCMSS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctgacggaaaatcccctgtgcttaatggtggttcagaggaaaaaaagccc
ggagaagagcagcacaaggacggggacgcctctggaagtaaagacagtcagacacaatct
tcctctgaagacgctcccaaagaaacagtagaagcgtctggagacaaaggcataccagag
gcagaaggagagacagctgcaagcagagaaggagaggaggaggaggaggaggaagacacg
gacagcatggacggcagtggactgttttctttcacggaggatggagagagggagagtgag
ggtgggagacgagagaggggcaaagagaaggatcgagggaaaagggcccctagaaagaga
atccgacctggagcgggcactaatcactcctccagctcagatgatgacgacgacgacgac
gatgatgagccaaaggaggaggaggacgatgatgatgacgacgatgttgatgatgaggcc
atggagtcatggctgggcgccgagctccacgacctccgtgggccgacgtggcaggcggtg
ccctctcttcgctccagagagatcggcaggaactcgcaccagtttgtccggcgtgtgtgt
ggagctcgcggcctcgtgcagaggctggagctccagggacgcttggagcgccacactggc
tgtgtcaacacgttgcacttcaacccctctgggacgcgtctggcgtcaggcagtgacgac
ctgcgggtggtgatctgggactgggccatccgccgggcagagctggagtttgacagtgga
cataagagtaatgtgtttcaggcaaagttcctgcctcacagcggagactccaccttggcc
atgtgcgctcgtgacggtcagatcagagtcgctgagctctcggccacgcagcgctgcaag
aacacaaagcgggtagcacagcataaaggagcagcacacaagctggccctggagccggac
tcgccttgttcgtttctgtcagctggagaggacgccgtggtgtttggcatcgatctgcgc
ctggatcgtcctgccaataaactggtggttgtaaaggagggcgataaaaaagtgggactg
tataccatctttgtcaacccagcaaagacgcaccagtttgcagttggtgggagggatcag
tatataagaatttatgatcagaggaagattaatgaaaatgaaaacaacggcgttctgaaa
aagttttgtccttcacatctggtctccagcgagtctaaaaccaacataacctgtcttgtg
tacagtcatgatggaacagaactcctggcaagttacaacgatgaagacatctacctattt
gactccaaccacagtgatggggcagactatcgcaggagatataaggggcaccgtaataac
gccacagtgaagggtgtgaacttctacggtccctgcagtgagtttgtggtcagcggtagt
gactgtggtcatatttacctgtgggacaaaaactctgctcgcatcgtccagttcatggag
ggagacagaggaggagtggtgaattgtctggagccgcacccccatctgccaggaatggcg
accagtgggttggaccatgatatcaaactgtgggcgcccactgctgaaaaccccactgga
ctcaagggtctgaaagaggtgatgaagaaaaacaagagggagcgcgatgaagacagcgtg
cgtcatggcgaccagtatgacacccagctgctgtggttcctgatgagacacatgagaaac
agacgacctccaagggctcgacgtgagggagcagacgcagacaccgacgagtcctggagc
tctccggattcctctgacgaagaggacggcggtccagaccacgtccagtgcatgtcgtcc
tga
DBGET
integrated database retrieval system
