KEGG   Xiphophorus hellerii (green swordtail): 116721839
Entry
116721839         CDS       T07363                                 
Name
(RefSeq) integrin alpha-6-like isoform X1
  KO
K06485  integrin alpha 6
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe04382  Cornified envelope formation
xhe04510  Focal adhesion
xhe04512  ECM-receptor interaction
xhe04514  Cell adhesion molecules
xhe04810  Regulation of actin cytoskeleton
xhe04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116721839
   04514 Cell adhesion molecules
    116721839
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116721839
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116721839
   04810 Regulation of actin cytoskeleton
    116721839
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    116721839
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xhe04147]
    116721839
   04515 Cell adhesion molecules [BR:xhe04515]
    116721839
   04090 CD molecules [BR:xhe04090]
    116721839
Exosome [BR:xhe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116721839
  Exosomal proteins of breast milk
   116721839
Cell adhesion molecules [BR:xhe04515]
 Integrins
  Integrin alpha subunits
   116721839
CD molecules [BR:xhe04090]
 Proteins
  116721839
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 UPF0179 Integrin_alpha
Other DBs
NCBI-GeneID: 116721839
NCBI-ProteinID: XP_032421724
LinkDB
Position
6:11491776..11510776
AA seq 1088 aa
MEGNTTTRGLWLLASLLACGGLLSAFNLDTEDVLRRDGDPGSLFGFSLAMHRQLYPEDKR
ILLVGAPQAKALNGQKSKVTGGIYKCEMSSNSDACSRVVFDNNEDTGNENKENQWMGVTV
SSQGPGGKVLTCAHRYKRQKNVNSPHQSRDIIGRCFVLSQDLTIDPSSSEDGGSWHFCNN
RNRGHERFGSCQQGLSATFDKDFHYFIFGAPGAYNWKGVVRLEQRNDTFIDIGIYNDGPF
EAGDETEKNPDLVPAPPNSYMGFSLDSGKSLTNKGQLTVVAGAPRAYYSGAVILLKKGGE
FSRVLLEEFTLKGEGLASSFGYDLTVLDLNGDGWDDIVVGAPQYFEKDSEIGGAVYVYIN
KAGKWNKVKPKRIDGPAVSMFGLAVENLGDINQDGYHDFAVGAPHEDSGAGKVYIYHGSA
RGEITDKASQVLSSKSAGVRQFGYSLAGNMDLDKNSYPDLAVGSLSDSVFVYRARPVINI
QKKITFSPSKINLSQKNCGNTFCLKVKTCFTYTANPSSYAPRLTVGYSLEADSDRTKTNL
LPRAMFTEPSDSDSNYIYQGTITMDTKGREQCFTRQLAIQENIKDKLRAIPIDVSVNIQD
AQRKRRQTQASQLSPVLDANDAQTTRIKVEFIKEGCGNDNLCQSNLMIRYRYGYRTTDED
EFTPLNLENGVPVFSLSSQKDVALEVTVTNPHGDDAYEASVIANFPSSLTYSAYRVSPEK
LQVTCTANKNGSMADCELGNPFKRDSETTFYLILGTAGISVSTSELEVELVLKTTSTQQN
LMPVKAKAKVAIVLQMSLSGQVQPSQLYFSGNVKGEMAMKTESDVGSAVTYQFRIINLGK
RLTDLGTATLQIEWPKSTKYEKWLLYLMKVSSTGVERIHCTPNEENFLNLEPVKTRKRRA
AEITEKRTDYAFSRLDDNKETLSCGSTAKCVTIRCPLGGLDMNALITLKARLWNSTFIED
YSKFHHVEVLVKASLHVDSATTNTMLRNAETTVKLSVFPERRSAQYGGVPWWIIVLSILL
GLLLLALLAFLLWKCGFFNRAKYEDKVPSYSAVRIRREERAVHSAKDNWGSLETKPWMTT
WHDKEHYS
NT seq 3267 nt   +upstreamnt  +downstreamnt
atggagggcaacaccaccacccgcggattgtggctgctcgcctcgttactggcgtgtggc
gggctgctgtctgcgtttaacttggacaccgaggacgtcctgaggagagacggggaccca
ggcagcctgttcggattctctctcgccatgcaccggcagctttatccggaggacaagaga
atactactggttggagcaccacaagccaaagcactgaatggtcaaaaatctaaggtgaca
ggaggaatctacaaatgtgaaatgagctccaactctgatgcttgctcaagagttgtcttt
gataataacgaggatacaggaaatgaaaacaaagagaaccagtggatgggggtgacggtc
agcagccagggaccaggaggcaaagtcttaacttgcgcccatcgctacaagcggcagaaa
aacgtcaactctcctcatcaatctcgtgacatcattggccgttgctttgtgctgagtcag
gatctaactattgatcccagttcaagtgaagatggcggaagctggcatttctgtaacaac
cggaacagaggccacgaaaggttcggttcctgccagcagggcctctctgctacattcgac
aaggacttccactacttcatcttcggggctcccggagcttacaactggaaaggtgtggta
cgattggaacaaaggaatgacacctttatagatataggtatctataatgatggaccattc
gaggcaggagatgagactgagaagaaccctgacctggttcctgctcctcccaacagttac
atgggtttctctctggactctggaaaatctttgaccaacaagggtcagctgacggtggtg
gcaggagctcccagagcttactacagtggagcagtgattctgctaaagaaaggtggagaa
ttcagcagggtccttctcgaggaattcacccttaaaggggagggcctggcttcctctttt
ggatacgatctgactgtgctggatctcaacggggatggctgggatgacatagttgttgga
gcccctcagtattttgagaaggactcggaaattggaggagctgtctacgtttacatcaac
aaggctggaaagtggaacaaagtcaaaccaaaaagaatagatggacccgcagtctctatg
tttggcctcgctgtggaaaaccttggcgatatcaaccaggacggttaccatgattttgca
gtgggagctcctcatgaagacagcggtgcaggcaaagtttacatttaccatggatcagcc
agaggagaaatcacagacaaggcatcacaggttttgtccagcaagtctgctggagtgagg
cagtttggctattcattagcaggcaacatggacctggataagaactcgtatccagacctg
gctgttggatccctttcagactctgtctttgtctatagagccagaccagttataaacatc
cagaagaaaattacgttttcaccaagtaaaatcaacctcagccagaagaactgtggcaac
actttctgcttgaaagtaaagacgtgtttcacctacactgctaacccaagcagttatgct
ccaaggctaacggtgggttactctctcgaggcggattctgaccggacgaaaaccaatctt
ttaccgagagcaatgttcacagaaccttctgactctgatagtaactatatataccaaggg
accattaccatggacacaaaaggaagggaacaatgttttacacgtcaacttgcaatacag
gaaaacattaaagacaagctgcgggcaattcccatcgatgtttctgtgaatattcaagat
gctcaacgtaaacgtaggcagacccaagcttctcagctttcacccgtccttgatgccaac
gatgcccagacaactagaatcaaggtggaatttattaaagagggatgtggcaacgataat
ttgtgtcagagcaaccttatgattcgatatcgctacggctacagaacgactgatgaagat
gaattcactcctttgaacttggagaatggcgtgccagtgttctcactcagcagccaaaaa
gacgttgccctagaggtgacggtgaccaatccacatggagacgacgcatacgaagcttct
gtgattgctaacttccccagttcgttgacctattctgcttaccgcgtctcaccagagaag
ctgcaagtcacctgcacagcaaataaaaatggatctatggctgactgtgagcttgggaac
ccattcaaacgtgactccgagacaacattctaccttattttgggtacagcgggcatctct
gtcagcacttctgaattggaggttgaacttgtgctaaaaacgacgagtacccagcagaac
ctaatgccggtgaaagcaaaggctaaggtagccattgtgttgcagatgtccttgtcagga
caagtccagccatctcagctttacttcagtgggaacgtgaaaggtgagatggccatgaag
actgaaagcgacgttggcagcgcagtcacgtaccagttcaggataatcaacttgggaaag
agactgacagaccttggaactgccaccctccaaatagagtggccaaaatctacaaagtat
gaaaaatggctgctctacctcatgaaggtcagctccacaggagtggagcgaatacactgc
acgcctaacgaagagaactttctaaacttggaaccagttaaaaccagaaagagaagagca
gcggaaatcacagagaaaaggactgactacgctttttcacgcctagatgacaacaaggaa
actttgtcatgtggcagtacagcaaaatgtgtgacaatcaggtgccccctggggggcctg
gacatgaacgcactcatcactctgaaggcccgactgtggaatagcacctttatagaggac
tattccaagtttcatcatgtggaggtgttggtaaaggcctctctccatgttgatagcgcg
acgacaaacactatgctgaggaacgccgagacaacagtgaaactgtctgtgtttccagag
aggcgttctgctcagtatggaggagtgccttggtggatcatcgtgctgtccatcctactc
ggcctcttgttgttggctttgctggctttccttctttggaagtgtggcttttttaatcgt
gccaaatatgaagacaaggttcccagttacagcgctgttcggatcagacgggaggagaga
gcggtacattctgcaaaagacaattggggcagcttggaaacaaagccatggatgacgact
tggcatgacaaggaacactattcctaa

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