KEGG   Xiphophorus hellerii (green swordtail): 116721840
Entry
116721840         CDS       T07363                                 
Name
(RefSeq) integrin alpha-6-like isoform X1
  KO
K06485  integrin alpha 6
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe04382  Cornified envelope formation
xhe04510  Focal adhesion
xhe04512  ECM-receptor interaction
xhe04514  Cell adhesion molecules
xhe04810  Regulation of actin cytoskeleton
xhe04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116721840
   04514 Cell adhesion molecules
    116721840
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116721840
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116721840
   04810 Regulation of actin cytoskeleton
    116721840
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    116721840
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xhe04147]
    116721840
   04515 Cell adhesion molecules [BR:xhe04515]
    116721840
   04090 CD molecules [BR:xhe04090]
    116721840
Exosome [BR:xhe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   116721840
  Exosomal proteins of breast milk
   116721840
Cell adhesion molecules [BR:xhe04515]
 Integrins
  Integrin alpha subunits
   116721840
CD molecules [BR:xhe04090]
 Proteins
  116721840
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3 OST_P1 DUF11 SYY_C-terminal
Other DBs
NCBI-GeneID: 116721840
NCBI-ProteinID: XP_032421727
LinkDB
Position
6:11513983..11530756
AA seq 1086 aa
MKHLRCGEGQEGGAEPLTTFNSHPVSLVLHSAPSSPKTHLFASSGKIYTLMEGCTTRGLW
LFILLLGCRRLSAFNLDTENVLQRNGDPGSLFGFSLAMHQQLRPEDKRILLVGAPQAKAL
NNQKSKVTGGLYKCEISPKPSDCQRIMFDNDENLSIEKKENQWMGVSVSSQGPGGKILTC
AHRYQELKSQTRNILGRCYVLSQDVTLKKSMEDGVEDGGNWHFCKGRNPGHQLFGSCQQG
VSVAFDMEHRYFIFGAPGAYDWKGLVRMEQRNDTLFDLGLYDEVPLETGGEKAKRPSDVP
TPDNSYLGFSMAVGQALTNKGQLTVVAGAPRTNFTGAVILLKKGSTARGDMLAEFTLEGE
GLSSSFGYDLTVLDLNKDGWDDIVVGAPQYFEKDSEIGGAVYVYINKAGKWNEVKPTRID
GPADSMFGLAVENLGDINQDGYHDFAVGAPYEDNGAGKVYIFHGSATGGFRKKATQVLSS
KSGVRQFGYSLAGNMDLDKNSYPDLAVGSLSDSVFIYKTRPVVSIEKDITITPKKIDLTK
KNCPEGVCLKVEACFRYTAGAQSSSTPLRMEYNFEVDADRKKNNLEPRGAFTDLENLSAG
TITMDAKEPQKCVTRTLVMKDNIKDKLRGLPIDVSVNIQNAKRKRRQAQVAQLAPVLDPK
DVEPFRSNVAFLKDGCGDDDVCASNLMLEYRYVYKDGDNVHSLEMENGVPVISLSGQKSA
ALEVTVTNSKGEDAYEAFVVANFPRSVTYAAYIPNAGQVSCKPNQNGSKVDCDVGNPFKR
DSKTTFYILFDITNTTEVEIELKLKTTSTQQNLANVKAKAKVAITLTLSLSGQVEPSQVY
YNGEAKRVTDVKAESDIGPAIKHWFTIINRGKRLKDIGQATLYIEWPKMTDKNNHLLYLM
TISSTGLKEIKCFPKEEINHLGKKSVNRKRRDITKGINGTISFFTGEKKHETLSCGSGAK
CVTMKCLLGDFDYKATITLSSRLWNNTFVGEYSDFNYVDVMVKASLHVNSSTKITMEEGA
ETQVRLSVFPERRSARYGGVAWWIIFLSILLLLLLLALLAFLLWKCGVFKKNKEGSSDKE
KLTSNT
NT seq 3261 nt   +upstreamnt  +downstreamnt
atgaagcatttaaggtgtggcgaaggacaggagggaggagcagaacctttaacaacattt
aactctcatccggtgtctcttgtattgcattctgcaccttcttccccaaagactcacctt
tttgcctcttcagggaagatttacacgctaatggagggctgcaccaccagaggactgtgg
ttgttcatcttgttactaggatgtaggcgactctctgcattcaatttggacacagaaaat
gtcctgcagagaaatggagacccggggagcctgttcggcttttctctcgcaatgcaccaa
caacttagaccagaggacaagagaatactgctggttggagcgccacaagccaaagcgctg
aataatcagaaatctaaggtgacaggaggactttacaagtgtgaaatcagccccaaaccc
agtgattgccaaagaattatgtttgataatgatgaaaatttgtcaatcgaaaagaaagaa
aatcagtggatgggggtgtcggtcagcagtcaagggccaggaggcaaaattttaacatgt
gcccatcggtaccaggaattgaaatctcaaacccgaaacatcctcggccgctgctatgtg
ctaagccaagacgtaactcttaaaaaatcaatggaagatggagtggaagatggaggcaac
tggcatttttgtaaaggtcggaacccgggccatcagctgtttggttcctgccagcagggc
gtctctgttgcattcgacatggaacaccgctatttcatctttggagctccaggagcttat
gactggaaaggcttggtgcgcatggagcaaaggaacgacactctttttgacctgggttta
tatgacgaggtgccattggaaacgggaggtgagaaggcgaaaagacccagtgacgtccct
actcctgacaacagctacttgggtttctccatggccgttggacaagctttgaccaacaag
ggtcagctgacggtggtggcaggagctcccagaactaacttcactggagctgtgattctg
ctaaagaaaggctctacggctcgaggagacatgctagcggagttcacgcttgaaggggag
ggcctgtcttcctcctttggatacgatctgactgtactggatctcaacaaggatggctgg
gatgacatagttgttggagcccctcagtattttgagaaggactcggaaattggaggagct
gtctatgtttacatcaacaaggctggaaagtggaacgaagtcaaaccaacaagaatagat
ggacctgcagattccatgtttggcctcgccgtggaaaaccttggcgatatcaaccaggac
ggttaccatgattttgcagtcggagctccttatgaagacaacggggcaggaaaggtctac
attttccatggatcagccacaggaggattcagaaaaaaagccacacaggttttgtccagc
aagtcgggagtgaggcagtttggctattcattagcaggcaacatggacctggataagaac
tcgtatccagacctggctgttggatccctctcagactctgtctttatctataaaacccga
ccagttgttagcattgagaaggatatcactattacaccaaaaaaaattgacctcaccaag
aagaactgtcctgaaggtgtctgcctgaaagttgaagcatgcttccgctacactgctggc
gcacagagctcttctaccccgctgaggatggagtacaattttgaagtggatgctgatcgc
aagaaaaacaatcttgagcccaggggggcatttacagatctggaaaatctgtctgctggg
accattaccatggatgcaaaagagccacaaaaatgtgtcactcgtactcttgtcatgaag
gacaatattaaggacaagctacgtgggctccccatcgacgtgtctgtgaacatccagaat
gctaaacgtaaacgaagacaggcccaagtcgctcaacttgcacctgtcctggatcccaaa
gacgtagaaccatttcgatcaaacgtggcatttttgaaagatggatgtggcgacgatgat
gtgtgcgctagcaacctgatgctagaatatcgctatgtctacaaggacggagacaacgtt
cattctttagaaatggaaaatggagtaccagtgatctcgctaagtggccaaaaaagcgct
gccctggaagtgacagtgaccaattcaaagggagaagatgcatatgaagcttttgtggtt
gctaacttccccagatctgtgacctacgctgcatacatacctaatgctggacaagtttcc
tgcaaaccaaaccaaaatggatctaaggtcgactgtgatgttgggaaccctttcaaacgt
gactcaaagacaaccttctacatcctgttcgatatcactaacacgaccgaagtggaaatt
gagctcaagttaaaaacgacaagtacgcagcagaatctggcgaatgtgaaagcaaaggcc
aaggtggccatcactctgacgctgtccttatcggggcaagttgaaccatctcaggtctac
tacaatggagaggccaaaagagtgacggacgttaaggctgaaagtgacattggccctgcc
atcaaacactggttcactataatcaaccgaggaaagcgactgaaagacattggacaagcc
accctttacatagagtggccaaagatgacagacaaaaacaatcatctgctctacctgatg
acgatcagctccacaggactgaaggagataaagtgctttcccaaagaggagatcaaccat
cttggaaagaaatcggttaacagaaaaagaagagacattaccaaaggaatcaatgggacg
atttcattcttcaccggagaaaagaagcacgagactttgtcgtgtggcagtggagcaaaa
tgtgtgacaatgaagtgcctcctgggggacttcgactacaaggcgaccatcactctgagc
tctcgcctgtggaataacactttcgtaggggaatattcagacttcaattatgtggatgtg
atggtgaaggcgtcgctacatgttaacagctcgacaaaaataacaatggaggagggtgct
gagacccaggtgaggttgtccgtgtttccagagagacgttcggctcggtacggaggagtg
gcgtggtggatcatttttctgtccatcctgttgctcctgctgttgctggccctgctggct
ttccttctttggaagtgtggagtctttaagaaaaacaaggagggttcatcagacaaagag
aagctgacatcaaacacataa

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