Xiphophorus hellerii (green swordtail): 116721864
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Entry
116721864 CDS
T07363
Symbol
pde1c
Name
(RefSeq) calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X1
KO
K13755
calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase [EC:
3.1.4.17
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00230
Purine metabolism
xhe01100
Metabolic pathways
xhe04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
116721864 (pde1c)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116721864 (pde1c)
Enzymes [BR:
xhe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.17 3',5'-cyclic-nucleotide phosphodiesterase
116721864 (pde1c)
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Motif
Pfam:
PDEase_I
PDEase_I_N
Bact_A2M_1st
Motif
Other DBs
NCBI-GeneID:
116721864
NCBI-ProteinID:
XP_032421772
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Position
6:complement(19891249..19992953)
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AA seq
748 aa
AA seq
DB search
MGSVTSALTRTRNALVKVGSQPENHDSERSRSAPESDRPRKRSKGFNVPGQTGRQSSRQS
LSEVLSRQDSDGAKQSSRKKPAEAQQSVANEDGESSCRPPASFARSKSQSALWNAITAGM
GIKGKEQKVPLNDPRSPEEILADDLPAADEPDATEKTAIRLRCLVKQLERGEASLADLKK
NLEYAASVLESVYIEETRRLVDTEDELSDIQSESVPSEVRDWLASTFTRQMGLMLRRNEE
KPRFRSIVHAVQAGIFVERMYRRTSNMVGLSYPASVISVLKNVDKWSFDVFALNEASGDH
ALKFIFYELLTRYDLISRFKIPISAVVSFVEALEVGYSKHKNPYHNLIHAADVTQTVHYL
LLKTGMVHWLTELEIFAMIFAAAVHDYEHTGTTNNFHIQTRSDTAILYNDRSVLESHHVS
AAYRLLQDDDEMNILYNLSKDDWRELRALVIEMVLATDMSCHFQQVKAMKNYLQQPEGID
KPKALSLLLHTADISHPAKSWDLHHRWTTSLLEEFFRQGDKEAELGLPFSPLCDRKSTLV
AQSQIGFIDFIVVPTFTVLTDMMERIVTPLIDEASHSGLSTFRRSSLNSISSDETKRHSV
KSMGSDSSSSGQSSLLTVDIKNFKALWNEEVYQNRERWKAQATKEAEERAKKEAEERAQQ
EEAMEPQEVQTESAYPEQKENKLDSKVPESAEVSRSPDGNPGEPKQANPPENTSHQSPLL
QNGELSEGGESPDGEENKNKGMSEAVME
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggggtcggtgacttctgctctgaccaggacgaggaacgcgttggtgaaagtaggttcc
cagccggagaaccacgactcagagaggagtcggtccgctccggagtcggaccggcccagg
aagaggagtaaaggcttcaacgtgccgggccagaccggtcggcagagctcccgccagtcg
ctgtccgaggtgctgagcagacaggactccgatggagccaaacaaagttcaaggaaaaag
cctgctgaggctcaacagagcgtggcaaatgaagatggagagagctcctgcagacccccg
gcaagttttgcacgctctaaatcccagagtgctttgtggaatgccatcacggcgggaatg
gggatcaaaggcaaagagcagaaggtccccctgaatgacccgcggagtcccgaggagatt
ctggccgacgaccttccagcagcagacgaaccagatgcaacagagaaaactgccatcaga
ttacgatgtctggtgaagcaactggagagaggagaagcttcccttgctgacctcaagaaa
aacctggagtatgcagcatcggtgctcgaatcggtttacattgaggagacaaggcgattg
gtggacacagaagatgagctcagtgacatccagtcagagtctgtgccttcggaggtgcga
gactggctggcctccaccttcaccaggcagatgggcctaatgctccggcgaaatgaagaa
aagccccgtttccggagcatcgtccacgccgtgcaggctggaatttttgtcgagaggatg
taccgacgcacctccaatatggtgggactcagctaccctgcatctgtcatatctgttctt
aagaatgttgacaaatggtcgtttgatgtgtttgccctaaatgaggccagcggggatcac
gctcttaaatttatattctatgagttgctcacaagatatgatctcataagccgcttcaag
attccgatctctgcggtggtgtcattcgtggaagccctggaagtgggatatagcaaacat
aaaaatccctaccacaacctgatccatgctgctgatgtaacccagactgtacactacctg
cttctcaaaactggcatggtgcattggttgactgaactagagatcttcgccatgatcttt
gcggctgcggtgcacgactacgagcacacagggaccacaaacaacttccatatccagaca
aggtcagacacagccatcctctacaacgatcgctcagtgttggagagtcatcacgtcagc
gcagcctatcgcctactgcaggacgacgatgaaatgaacatcctctacaacctctccaag
gatgactggagagagctgcgtgctttggtgatcgagatggtgttggctactgatatgtct
tgtcacttccagcaggttaaagccatgaagaattatctacagcaacctgaaggcatcgac
aagcctaaggctctctccctacttctccacacagctgacatcagccatccagccaaaagt
tgggacctgcaccaccgatggaccacttctttgcttgaggagttcttcagacagggggac
aaagaagccgaactaggcctgccgttctctccactgtgtgacagaaagtcgacgttggtt
gcacagtctcagattgggttcatagacttcattgtggttcccaccttcactgtgctgact
gacatgatggagcgcattgtcactccgctcatcgatgaggcctcccactctggtctttct
acctttagacgctcaagtctaaacagtattagctcagatgaaaccaagaggcacagcgtg
aagagcatgggatctgacagcagctcgtctggccaaagctcccttctgacggtggacatt
aaaaacttcaaggccttgtggaatgaggaagtttatcagaacagggaaagatggaaagcc
caggctaccaaagaagcggaagaacgagctaaaaaggaagcagaagagcgagctcagcag
gaggaagctatggaaccgcaggaggtccagacagagtctgcataccctgaacagaaggag
aacaaattggacagcaaggtgccagagtcagcagaggtcagcagatcaccagatggaaac
ccaggggaaccaaagcaggcgaacccccctgagaacacgtcacaccagagtcccctgctg
cagaatggtgagttgtcagaggggggtgaatctcctgatggtgaagaaaacaagaacaaa
ggaatgagtgaggcagtgatggaataa
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