Xiphophorus hellerii (green swordtail): 116721878
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Entry
116721878 CDS
T07363
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116721878
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
116721878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-Di19
Homeodomain
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
116721878
NCBI-ProteinID:
XP_032421795
LinkDB
All DBs
Position
6:25799685..25868404
Genome browser
AA seq
1108 aa
AA seq
DB search
MADGPRCKRRKQANPRRSSVTNFNNSLEASSDSDDEDKLHIVEEDSLLENDATETDGATA
LENHDAAITVLPHNGSWNGVKEECVSEEEEDEEVKDALKILQQSDTAIIYPEAPEDEQSP
AETGDADENGTSDSFSHSHICPYCSRGYKRNASLKEHIKYRHETSEDNYSCSQCSYTFTY
RSQLERHMSHHRGNKEQRHVSQSTAGSGGTGGTRKFKCTECSKAFKYKHHLKEHLRIHSG
EKPYECSNCKKRFSHSGSYSSHISSKKCVGAATQNSVTVTVVKTTSPSTQTKPVAIAPAR
LPVKEKTESKPLQEQLPVTQIKSEPVEYECKPVMAPPATSTGSNGVVNGGAEPPAAAAPM
AAIPQSVAMVVPTVGLMSPVSINLNDLQSVLKVAMDGNVLRQVLGSANGVVAQGKQGIIV
QQPQQQIISLPAFVDHDGTTKIIINYSISPAAGTNAAAALPTPLVIKNNLPPAPVVTTTA
AAAPTATKTDQLETSEVTDLSLKKNPVAEPIKVTKTEATAEETMKESEPAKVPKSSSSST
CLLCDDCPDNLEALHLLQHRKAANGEAVDSAALDPSFAALLSEAGVMLEEPPVEDLLSLL
KTYFASNANPGEEELTKISKSVNIPMEVVKKWFIKMNSGKNTSKCHTESSDPPEETKTTN
SSSEETLNNDENGSQEECDRPQSRASSPSDSLSLSGDLVIVKSEPEDPEDADSQAEPLDL
SLPKHEIPPSEKKATPPPKQQEHPLNLTCLRKDGQTLFVTTSQSTNPVNIVTAAQLPTLV
AIASQGTVGCLGTINTTTKRTILIPQLTYTYAAATGNAAGAKTVVLNGHKEKRSESNTDG
ASSAEEQDSKKRRVENGVYPCDLCSKVFQKGSSLLRHKYEHTGKRPHECTICNKAFKHKH
HLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKDWSILGSGVGSRRGQLE
LGSPGGGALSDSRTTTPQSQMDSDERESEDEDDEAMCVDDIRVVQVDDGECEIYEGNFDD
DEEEEEEEEETEAGQAQGEGQDFFCDVVEVELENEHAENGTSEGKREEKEEPAGAAAEKR
ADCEAETDKVMKEESDSTEESQEAAKTK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgaggaggagcagcgta
acaaacttcaacaatagcttggaggccagttcagactcagacgatgaggacaagctacat
attgtggaggaggacagcctgttggagaatgatgccacggaaacggacggggccacagcg
ctggagaaccatgatgccgccataacagtattaccccacaatggctcctggaatggagtg
aaggaggagtgtgtgtcggaggaggaggaggacgaggaggtgaaggacgctctaaagatt
ctccagcagagcgacaccgccatcatttatcctgaagctccagaggacgagcagagtccg
gctgagacaggagacgctgatgaaaacggcacatccgacagcttctcccactcgcacatt
tgcccgtactgttctcggggctacaaacgcaacgcctcgctgaaggagcacattaagtac
cgccacgagaccagcgaggacaactacagctgctcgcagtgcagctacaccttcacctac
cgctcgcagctggagaggcacatgagccaccaccgaggcaacaaggagcagcgtcacgtt
tcccagtccacagcaggatcaggaggtacaggtggaacccgcaagttcaagtgtaccgaa
tgttcaaaggccttcaaatacaaacaccacctaaaggaacacctgcgcattcacagcggt
gagaagccatatgaatgctcaaattgcaaaaagcgattctcccactctggctcctacagc
tcccacatcagtagcaagaagtgtgtgggagcagcaactcagaacagtgtgactgtaacg
gtggtgaagaccacgtctccaagcactcagactaaacctgttgcaatcgctccagcacga
cttcctgtcaaagaaaagacggaaagcaaaccgctccaggagcagctgcccgtcacccag
atcaaatccgaacctgtggaatacgagtgcaagccggtcatggcgccaccggcgacttca
accggcagcaatggagtggtgaacggcggggcagagccaccagcagcagcagccccaatg
gcagccatccctcagagcgtagccatggtcgtcccaacggtgggcctcatgtctccggtc
agcatcaatctgaacgacctgcagagcgtgctgaaggtggcgatggacggaaacgtgctc
aggcaggtgctgggctcagccaacggcgttgtggcgcaggggaagcagggaatcatagtc
cagcagcctcagcagcagatcatcagcctccccgccttcgtggatcacgacggcaccaca
aagattatcatcaattacagcatcagccctgcagccggcaccaacgccgctgccgccctg
cccacgccactcgtcatcaaaaacaaccttccccctgctcccgtcgtcactaccactgcc
gctgccgccccgaccgcaacaaaaacggatcagctcgaaacgtccgaggtaacggacctc
agtctgaagaaaaatccagtagcagaacccattaaagtcacaaagacggaggcaacagca
gaagaaaccatgaaagagtcggaaccagctaaagtacccaaatccagcagcagcagtacg
tgtttattgtgcgacgactgtcctgataacctggaggcgctgcatctcctgcagcatcgc
aaagctgccaacggggaggccgtggactcggccgcgttggacccgtcgtttgccgctctg
ctaagcgaggccggcgtgatgctggaggagccgccagtggaagacctcctctcgctcctc
aagacttacttcgcctccaacgccaaccccggtgaagaggagctgacgaagatctccaag
tctgtcaatattcccatggaagtggtcaagaagtggttcatcaagatgaattctgggaaa
aacacgagtaaatgtcacaccgagtcgtcagatcctccagaagagactaaaaccacaaac
tccagctcagaggagactttgaataacgatgaaaatggcagccaggaggaatgtgacaga
cctcagtcccgcgccagctcgccgtcagactcgctgtctctcagcggggatctggtgatc
gtcaaaagcgagccagaagacccagaggacgcagactcgcaagcagaacctctggacctg
tctcttcccaaacatgagatcccaccatcagaaaagaaagccacgcctcccccaaagcag
caggagcatcctctgaacttgacctgcctgaggaaggacggccagactctcttcgtcacc
acgtctcagagcaccaaccccgtcaacatcgtcaccgccgcccagctgcccacactagtg
gccatcgccagtcaggggacggtgggctgcctcggcaccatcaacaccaccacaaaacgc
accatcctcatcccccagctcacctacacctacgcagccgccaccggcaacgccgccgga
gccaagactgtcgtcctcaacggccataaggagaaacgttcagagagcaacactgacggg
gcttcctctgcagaggagcaggacagcaagaagcggcgggtggaaaatggcgtctatccc
tgtgatctttgctccaaggtcttccagaagggcagttcgctgctcagacacaaatatgaa
cacacaggaaaacggccccatgaatgcaccatttgcaataaagctttcaaacacaagcat
cacctgatcgaacactccaggctgcactccggcgagaaaccctaccagtgcgacaaatgt
gggaagcgcttctcccattcgggctcgtactcgcagcacatgaaccaccgctactcctac
tgcaagaaggactggtccatcctgggctccggcgtggggtcacgcaggggtcagttggag
ctgggcagccccggcggcggcgcgctgtcggacagccggaccactacgccgcagtcccaa
atggactcggacgagcgggagagcgaggacgaggacgacgaggccatgtgtgtggacgac
atccgggtggtgcaggtggacgacggcgagtgcgagatctacgaaggcaacttcgacgat
gacgaggaagaggaggaggaggaagaagagacggaggctgggcaggcgcagggggaggga
caggattttttttgcgatgtggtggaagtggagctggagaacgaacacgcggagaacggc
acttcggaggggaaacgcgaagaaaaggaggaaccggcgggcgcagcagcggagaaacgg
gcggactgcgaagcagaaacagacaaagtcatgaaggaggaatcggacagcactgaggag
tcgcaggaagctgcgaaaacgaaatga
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