Xiphophorus hellerii (green swordtail): 116721881
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Entry
116721881 CDS
T07363
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116721881
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xhe03310
]
116721881
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116721881
Nuclear receptors [BR:
xhe03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
116721881
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PA_decarbox
Motif
Other DBs
NCBI-GeneID:
116721881
NCBI-ProteinID:
XP_032421799
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All DBs
Position
6:12218456..12237289
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AA seq
496 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQKSQECVGSNGPAALSLPRE
DGGCGSGADDGEEGLSRSYSSGGSTSTLSDLDDIAALPDLFDLPLTPEEASEYCSLELLG
GGGDSTGNTSNSSSSSSASSSNQNSPQQTIMDTADSCGSQLLLTHSLLGRRRSLLDQLPD
DCSVTDLEHVTQSIVKSHLETCQYSAEDMKRFTWVHYTPEETRVFQNKSAEWMWQQCAHH
ITNAIQYVVEFAKRIAGFMDLCQNDQIILLKAGCLEVLLIRMCRAFNSNNNTIFFNGKFA
SAQFFKALGCDDLVSAVFELGKGLSRLQLSDEEMALFSAAVLLSPDRPWLTEGQKVQKLQ
EKVYLALQHSLQKSGASEEKLDKMLSKLPIMKSICNLHVDKLEFFRLVHPETAYSFPPLY
REVFGSEMPLPDSTDS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatcgaggtcatcccctgtaagatctgtggggacaagtcctcaggaatc
cactatggagtcattacctgtgagggctgcaagggtttcttccgtcgcagccagcagaac
aacgccatgtactcttgctcccgccagaggaactgtctgattgaccgaacgaaccgcaat
cgttgccagcactgccgtcttcagaagtgtctggctctgggcatgagccgagatgctgtg
aagtttggccgcatgtcaaagaagcagcgtgacagcctctacgccgaggtccaaaagcat
cagaagtctcaagagtgtgtgggctctaacggccccgcagctctgtctctacccagagag
gacggaggctgcggcagcggggcggacgacggcgaggagggcctgagccgctcctacagc
agtggggggtccacatcgaccctcagcgacctggacgacatcgccgcactgcccgacctt
tttgacctaccgctgacgcccgaggaggccagcgagtactgcagcctggagctgctggga
ggcggaggagacagcaccgggaacacatctaactcctcatcctcgtcttccgcttcctcg
tccaatcagaactcgccacagcagaccataatggacacggcagacagctgtgggagccaa
ctcctgctcacacactcgcttctgggacgcagacggtcacttttggaccagttgcctgat
gactgctcagtaacagacctcgagcatgtcactcagagtattgtaaagtctcacttggaa
acatgccagtacagcgcagaagacatgaagagattcacctgggtacattacacacccgaa
gaaaccagagttttccaaaacaagtcggccgagtggatgtggcagcagtgcgcacatcac
atcaccaatgccatccagtatgtggtggagtttgccaagcgcatagctggctttatggac
ctgtgccagaatgatcagattattttgctgaaagcaggctgtctggaggtcctactcata
cgcatgtgtcgcgcctttaacagcaacaacaacaccatcttcttcaatggaaaatttgcc
tcggctcagttcttcaaagctctggggtgtgatgatctggtgagcgccgtttttgagctg
ggaaaaggtctcagccgtctgcagctctcagatgaggaaatggccctgtttagcgctgct
gttcttctgtcacctgatcgaccctggctgacagaaggtcagaaggtccagaagctccaa
gagaaagtctacctggctctgcagcacagcctacagaagagtggtgcttctgaggagaaa
ctggacaagatgctgtctaagctgcccataatgaagtccatctgtaatctccacgtcgat
aaactggagtttttccgcttggtccacccagagactgcctacagttttccaccgctgtac
cgggaagtgttcggcagtgagatgcctctgccggactccaccgacagctag
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