Xiphophorus hellerii (green swordtail): 116721940
Help
Entry
116721940 CDS
T07363
Name
(RefSeq) occludin-like
KO
K06088
occludin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03272
Virion - Hepatitis viruses
xhe04382
Cornified envelope formation
xhe04514
Cell adhesion molecules
xhe04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
116721940
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116721940
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116721940
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116721940
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116721940
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116721940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
CENP-H
MapZ_EC1
Motif
Other DBs
NCBI-GeneID:
116721940
NCBI-ProteinID:
XP_032421864
LinkDB
All DBs
Position
6:2622498..2638088
Genome browser
AA seq
553 aa
AA seq
DB search
MYEPQYYDSPPVYSPPYSTTSHSLYPPRSVHSPQSQYVSYAHQPPPDSYYMEGQPQHFYR
WFSPPGFVKTFQGTTALMCFIIFACVASTLVWDMNGFGYGGYGVGDAVSVGGAGSGYYGG
SYGYGGSYMTPQSAKAAMISMVAINFLVSLSFLVGSFSRSRMMRGCRFYLTIFISDIILA
VFQGIIDIIFVIGVNPMSQSSQSMLYNPMLRMCQNIQGTPSLSGSVGAGFPGGFPLYNQY
LYHYCFMDPEEAVGLVLGLLVVVALSISAYYAYKTRSKIWRHGKSNILWDEPMVRLSDGH
DVLDWVNHVREARSTQQAPTVVVSERAAPDLRAENSGGHSKGHKEADALISSSCTENSAR
HDTEPVYQNTRATVCSSSSYETDSVRKLPLHHTNKREPPLHHNNKRPQKQLTEPTPAAQL
AAESQYETGYTSGDTGNELDWDQRDYLYRMYPAITTDEQRRQYKREFDSHLAHYKRLCSE
MDHVSDQVHKLSRELDTLDEGSVRYQGVADEYNRLKDLKKTEDYQAKKRQSKELRRKLFH
IKHLVKIYDQGFC
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagccccagtactatgacagcccccctgtgtacagtcctccgtacagcaccacc
tcccacagtctctaccccccaagaagcgtccattcccctcagagccagtatgtctcctat
gcccaccagcctcctcctgattcctactacatggaggggcagccgcagcacttctacagg
tggttctctcctccgggttttgttaaaaccttccaaggaaccacagccctcatgtgcttc
attatctttgcctgtgtggcttcaacgctggtgtgggatatgaatgggtttgggtacggg
ggttacggtgttggggacgcggtctctgtgggcggagccggctctggctattatggaggc
agctacggctacggtggctcctatatgacgccgcagtcagccaaggcagcgatgatttcc
atggtggccatcaacttcctggtttcactgagtttcctggtgggaagtttttccaggtcc
cggatgatgcgagggtgcaggttctacctcaccattttcatctctgacatcatcctggct
gtttttcagggcatcattgatatcatctttgtgatcggggtgaaccccatgtctcagagc
tcacagagcatgctgtataaccccatgctgaggatgtgtcagaacatccaggggaccccg
agtctgagcggcagtgtgggggccggtttccctggaggctttcccctgtacaatcaatat
ctttaccactattgtttcatggaccccgaggaggcagtggggcttgttctgggcctgctg
gtggttgtagctctgtctatttctgcttactatgcctacaagacccgcagcaagatttgg
cgccatggaaaatcaaacatcttgtgggatgagccgatggtcaggctgtcagacgggcat
gatgttctggactgggtgaaccacgtcagggaggcacgcagcacccagcaggcgcccacc
gttgtggtgtcagagcgcgctgcgcctgacctgagggcggagaacagcggcggccacagc
aaaggacacaaggaagctgatgctctaatctccagttcctgcacagagaacagcgccagg
cacgacactgagcctgtgtaccaaaacacaagagccacggtttgttccagcagctcctac
gagaccgacagcgtgaggaagcttcctcttcatcacaccaacaagagggagcctcctctt
catcacaacaacaagcggccgcagaaacagctcacagaacccacgcctgctgctcagctg
gcggctgagtcccagtacgaaactggttacacctcaggggacactggtaatgagctggac
tgggaccagagagattacctgtacaggatgtacccggccataaccacagatgagcagcgt
cgccagtacaagagagagtttgactcgcatctggcccactacaagaggctctgctctgag
atggaccacgtcagtgaccaggtgcacaaactgagccgagagctggacacgctggacgaa
ggctccgtgaggtaccagggtgtagcagatgaatacaaccggctgaaagacctgaaaaag
acggaagactatcaggctaagaagagacaaagcaaagaacttcgaagaaaacttttccac
atcaaacatctggtgaaaatctacgatcaaggcttctgttaa
DBGET
integrated database retrieval system