Xiphophorus hellerii (green swordtail): 116721965
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Entry
116721965 CDS
T07363
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04020
Calcium signaling pathway
xhe04148
Efferocytosis
xhe04218
Cellular senescence
xhe04310
Wnt signaling pathway
xhe04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116721965 (nfatc4)
04020 Calcium signaling pathway
116721965 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116721965 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
116721965 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
116721965 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116721965 (nfatc4)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
116721965 (nfatc4)
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GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Motif
Other DBs
NCBI-GeneID:
116721965
NCBI-ProteinID:
XP_032421911
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Position
6:24693370..24720059
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AA seq
888 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEDPPQRQIQGPSPARTAEPESSVAGEEEGDGALLRLDSS
NLDNHLAIAHAGHSINIPSPPPSSNQRAGMHSPPPRRAAVREFSGTYESLPARSVQVSES
CVVECPSIQITTISPEDDPAPPVPSYWDMGSGGGWDRERLYLPLLDPFSYRDRFPGSLSP
SPASSPSSRGWLSPASSCDSLLVEEEELNEANVGFGLSPSSRPTSPGGKKRRNSPLASPC
ISRRSSYSEDLQGCNLEGGESASQSQALPGSCELNIPQKTRKTSLEQLSPREVDQESGLG
RSSPCPLPETQQPRREPPSLGMDYLPVPPALAWGRTRASAHSPLFRSNALPPLDWPLPSQ
FDQYELRIEVQPRPHHRAHYETEGSRGAVKAAPTGHPVVKLCGYAERKPLSLQVFVGTAD
DRSIRPHPFYQIHRVTGKMVGTASHESVQAGTKLLDIPLNPENNMTALIDCAGILKLRNS
DIELRKGETDVGRKNTRVRLVFRTHLPVAPPVGPPGRVLALQVASLPIECSQRSAQELPV
IESVSVTSCSVEGGEELLLSGTNFLPISRVLFMERGTDGKLQWEEEAHVDRDNSNECLLC
VRVPAYSDLSVSRPVSVSLYVSNGKRKRSSTHCFKYLPVMFKEEDPLLSRPSVPPLDGGT
VGPPRMDRGFHVSDDRGLGFHLPPYPSTYSPPCPAMSYQEEYCPKPDSAVEEPVGSRAPL
SERNPSFENLELGFTELLPPLYPRAPQPPSPSPSPWLDSPYLSSSPSPSHSSSLSPFPTE
SPLANSPLPPIPTSPFPQYSTYPQELCPSPPSNPYQDACPAPYSHYEGWEPQGRMLGTSH
GGEGDAKNQECPLEFTSSASMHHITFEEVSEFIGEDIQAYQSGSHMNN
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggctcgggctgggaggagggcgagttcgagttcaagctggtgttt
gaggaggacccgcctcagcggcagatccaggggccgtccccggcgcgcacagccgagccg
gagagctccgtcgccggggaagaggaaggtgatggcgccctgttgcggctggactccagc
aacctcgacaaccacttagccatcgctcatgcaggacactcaatcaacatccccagcccg
ccgccctcgtccaatcagagggcagggatgcattcgccacctccccgacgggccgccgtc
agagagttcagcggcacctatgagagcctgccggcccgctccgttcaggtgtcggagtcc
tgtgtggttgagtgccccagcattcagatcaccaccatttccccggaggatgacccggcg
ccgcccgtccccagctactgggacatgggcagcggcggcggctgggacagggagcgcctc
tacctccccctgctggaccctttctcctaccgcgaccggttccccggctccctcagcccc
agccccgcctccagcccgtcgtcccgcggctggctcagccccgcgtccagctgcgactcc
ctgctggtggaggaagaggagctcaatgaggccaatgtcggtttcggactctccccgtcc
tccaggcccacttccccaggaggaaagaagcgcaggaactctcctctggcgtctccctgc
atctcgaggaggagcagctactcggaggacctgcagggatgcaacctggagggcggagag
tccgcctcgcagtcgcaggcgctgcccggcagctgtgagctcaacatcccgcagaaaacc
aggaagacgtccctggagcagttgtctcccagagaagtggaccaggagtcgggtctgggc
cgaagctccccctgtccgctgccggagacccagcagcccaggagagagcccccgtctctg
ggaatggactacctccctgttccccctgccctggcctggggcagaaccagagccagcgcc
cacagtcctctcttcaggtctaatgctttgcctccacttgactggccgctcccgtcccag
tttgaccagtatgagctgcgcatcgaggtgcagccccggccacaccatcgagcccactac
gagacggagggcagcagaggcgccgtcaaagccgcaccaacaggacatcctgttgtcaag
ctgtgcggttacgcagagaggaagccgctgtcgctgcaggttttcgtcggaacggctgac
gaccgctcaatcaggcctcatcctttctaccagatacacagggtgaccgggaagatggtc
ggcaccgccagccatgaaagcgtccaggcagggaccaaactgttggacatccccctcaac
cccgagaacaacatgaccgccctcatcgactgcgctgggattctgaaactgagaaactcc
gacatcgagctgcgaaaaggcgaaacggacgtcgggaggaaaaacacccgcgtgcgtctg
gtgtttcgtactcacctccctgtagcgccccctgtgggccctcccgggcgcgtcctggct
ctgcaggtcgcctctttgcccattgaatgctctcagcggtcggcccaggagcttcctgtc
atcgagtccgtcagcgtcacgtcctgctcggtggagggaggcgaggagctgctgctgagc
ggcaccaacttcctgccgatctccagagtcctcttcatggagagaggcaccgatgggaaa
ctacagtgggaggaggaggcgcatgtggaccgggacaacagcaacgagtgtttgctgtgt
gtgagggttcctgcctacagcgacctctccgtcagtcggcctgtgtccgtcagtctgtac
gtctccaacgggaagaggaagcggagcagcacgcactgcttcaagtaccttcctgttatg
tttaaagaagaggatcctttgctgtcccgtccctctgttccccctctggacgggggaact
gtgggtccgcccagaatggacagaggcttccacgtgtccgatgaccgcggcctcggcttc
caccttcccccctacccctccacctactcccctccctgcccggccatgagctaccaagag
gagtactgccccaaacccgacagcgccgtggaggagccagtcgggtccagggcgccactg
tccgagcgtaaccccagctttgagaacctggagctgggcttcaccgaactgctgccccct
ttgtatccccgcgctcctcagcctccgtccccgtctccttccccatggctggactccccc
tacctgtcctcttcaccctctccatcccactcctcctctctcagcccgttccctactgaa
agccccctcgccaactccccgctgcccccaatccccacatcgcctttcccgcagtactcc
acttatcctcaggagctgtgtccctcgcctccgtccaacccttaccaggacgcctgtccg
gcgccgtactcccactacgagggctgggaacctcagggaaggatgctgggtacgagtcac
gggggagagggggacgccaagaaccaggagtgtccactggagtttaccagctcggcctct
atgcaccacattaccttcgaagaagtgtcagagttcatcggggaggacatccaggcctac
cagtcaggctcgcacatgaacaactag
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