Xiphophorus hellerii (green swordtail): 116721969
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Entry
116721969 CDS
T07363
Name
(RefSeq) oocyte zinc finger protein XlCOF8.4-like
KO
K19871
sal-like protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116721969
03036 Chromosome and associated proteins [BR:
xhe03036
]
116721969
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116721969
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
116721969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_6
zf-C2HE
zf-C2HC_2
zf-Di19
zf-AD
zf-C2H2_11
zf-met
Motif
Other DBs
NCBI-GeneID:
116721969
NCBI-ProteinID:
XP_032421918
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Position
6:24906056..24919866
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AA seq
771 aa
AA seq
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MLNGVALRSQIASVVDALAKAAVAEIFKVVEDGMVVLRLEMCQREDEIERLKSSMEVLHG
ELRAARQAETHRLEHRGGDESQRGVGDEKILVEKVPSVENHSMSSVPEAQNKGELVKEGN
EDSRGQLDRPVEGSLYGGGQWRPGVPKEAGGSSSEYLTLGQNSLSCLSEPSLDGGLVLSC
SSSGGFPQSPFSRGLLGYNQYRNTVRRRTVKRLMFKKGFICPYCGKCFERAGHLERHKRI
HTGEKPYRCEICGRRFNQKCSLKEHMKIHRRGLQTRPGEVQMSQQIPIPQVNPCMEQHRP
EEVSQVKADDNQTKSEEVLPSSVQVKSEPVEENITQPQLHVENNQATNRADNLGENVTSV
DQGSQLWASRLQNNPTEFLNSSSQNMSSFPAITQLLQPPEETSYSNFSVRGKMYGQLKTS
TVPQTPYGCSGSVIISSNPDLQDATEASNHLSERKNRPFRVLKPKKCFVCTYCGKVFERA
GHLERHLRIHTGEKPYGCHICGRCFNQKSSLKGHMKTHRNGTTTDMLEAHHLMFSVSDNQ
LMESYMESSNGPTAADEPFPAPAYAHSIKEEPLAVKLEPSDENFLSVSQVGTDNRAAAAD
KSLLWTSAVEESIDSPDQPVCVLLQDVKYHLSSPAGGASEQQGCTSKDLAFIDNKAKEDQ
FSAVGLQQRTSNVSHDLAGRDFCLESGNGVNQDGVYEFTLKASDSFGESCSTDPARQNYI
CSSCGQSFDSFHIFQEHQCEKLPEQPLSCEMCGKTFNQLSILKLHLKLHAK
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacggcgtggctctgcgctcccagatcgcctccgtggttgatgccctggccaaa
gcagctgtggcagagatcttcaaagttgtggaggacggcatggtggtgctgcggctggag
atgtgccagcgggaggatgagatcgagaggctgaagagcagcatggaggtcctgcatgga
gagctgcgggcggcgcggcaggcggagacccaccggctggagcaccgcggaggagacgaa
agtcagaggggtgttggagatgagaagatcttggttgagaaggttccctctgtggaaaac
catagcatgtcatctgtacctgaagcacaaaataaaggtgaacttgtgaaggagggaaac
gaggacagcagaggacagctggacaggccagttgaagggtctctgtatggaggtgggcag
tggaggccaggggtgccgaaggaggctggaggcagcagctctgaatacttaactctaggt
caaaactccttgtcgtgtctctccgagccttcgttggatggcgggcttgttctgtcctgc
agcagctccggcgggtttccacagagccccttcagccgcggcctgctgggttacaaccag
tacaggaacaccgtgcgcaggcggacggtgaagaggctgatgttcaagaaaggtttcatc
tgtccgtactgcggcaagtgcttcgagcgagctggacacctggagagacacaagcggatt
cacacgggtgagaaaccgtatcgctgcgagatctgcggacggcggttcaaccagaagtgc
agccttaaagagcacatgaagattcacagaagaggtcttcagacgagaccaggagaggtc
cagatgagccaacaaatcccaatcccacaggtgaatccatgtatggaacagcatcggcct
gaagaggttagccaggtgaaggccgatgataaccaaacaaagtctgaagaagttctgcca
tcatccgtgcaggtaaaatctgagccggtcgaggaaaatattactcagccgcagcttcat
gtggaaaacaatcaggcaacaaacagagctgacaacctgggtgaaaacgtaacatcagtg
gatcaaggcagccaactgtgggcatccaggttacagaacaatccgacagagtttctaaac
agctcgtcgcagaacatgtcttccttccctgccattactcagttactccagccaccagag
gaaacttcctatagcaacttttccgtccgaggaaaaatgtacgggcagctgaaaacctcc
accgtccctcagacgccttatgggtgttcagggtcggtcatcatctccagtaaccccgac
ttgcaagacgcgacagaggcctcaaaccacctcagcgagaggaaaaaccgtccgtttcga
gttctgaaaccaaagaaatgctttgtctgcacctactgcgggaaggtgtttgagcgagcc
ggacacctggagagacacctgcggattcatactggggagaaaccgtacggctgccatatc
tgcgggaggtgcttcaaccagaagagcagcctcaaaggtcacatgaagactcacagaaac
gggacgacgacagacatgctggaggcccatcacctgatgttctcggtgtccgacaatcag
ctgatggagagttacatggaaagcagtaacgggccaacagctgcggacgagccgtttccc
gccccggcgtacgctcactccattaaggaggagccgctggcggtgaagctggagcccagc
gacgaaaacttcctctccgtgtctcaggtggggacggacaacagagccgcagcagcagac
aaaagtttactgtggacgtctgcagtggaggaaagcatcgacagcccagatcaaccagtc
tgtgtacttttacaagatgtgaagtaccacctcagttctcctgcagggggagccagtgag
cagcagggctgcacctcaaaggatttggcttttatagacaacaaagcaaaggaggatcaa
ttttcggctgtgggattgcagcaaaggacttcaaatgtaagtcacgatctggctggaagg
gatttctgcttggagagcggcaacggcgtgaaccaagatggcgtctacgagtttaccctg
aaagcatcggacagcttcggggagagctgcagcacagaccccgccagacagaactacatc
tgctccagctgtgggcaaagctttgacagtttccatattttccaggagcatcagtgtgag
aaactcccagagcagccgttgagctgcgagatgtgtggaaaaactttcaaccagctgagc
atcctgaagctgcaccttaagctacatgctaaataa
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