Xiphophorus hellerii (green swordtail): 116722051
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Entry
116722051 CDS
T07363
Name
(RefSeq) PEX5-related protein-like
KO
K13342
peroxin-5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116722051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116722051
Membrane trafficking [BR:
xhe04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116722051
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_17
TPR_8
TPR_11
TPR_19
TPR_CcmH_CycH
TPR_16
TPR_14
CFAP70_mid_TPR
TPR_9
ANAPC3
TPR_12
CFAP70_TPR_C
RMD1-3
TPR_Slam
ARM_TT21_5th
TPR_20
CENP-Q
VMAP-M1
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
116722051
NCBI-ProteinID:
XP_032422043
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Position
6:30355975..30367877
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AA seq
560 aa
AA seq
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MYQVQESRPLLSPSIDDFLAESRSEAASGRPPTSNPAVLSTALDLVDLSDPAETRHHRVT
KSPVRRTTGSRSPRHRTRTEETELVPVQLERRPAGPGTPDRTSLDSVSLSSPLDKWDELD
LDLEDGGRRRRRQARCTSHHSSSELLWSAEFRTDPLMKSSLDDLDFISLNQDNSVSRLRR
RTRSLLGRNESLEDEFVRAKAAVESDTEFWDKMQAEWEELARRNWLEETESQQKPAPPPG
SPVEKGYYFSATNPYLDWPNAFAEGQDKAREGDLNAAVLLLEAAILQDPSDAEAWQTLGT
TQAENENEQAAIASLQRCLELRPNNLPALMALAASLTNSSQLPEACDALRRWIGHNHRYR
HLVQSRSPLQGSPATPRRGPGCSTPASSALQEVLLLFQEAAQLNVDNVDPDLQTGLGVLY
NLSSEFDRAVEAFSAALSVRPQDYLLWNRLGATLANGSRSAEAVEAYGRALQLRPGFIRS
RYNLGISCINLGSLREAVSNFVTALNQQRCSQRCSQLQMSTNIWAALRIAVSMMDDPGLD
RAASLGDLDLLTRTLEGRDL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaagtccaggagagccgccccctgctgagcccctccatcgatgacttcctggca
gagagccgcagcgaagccgcctccggacgacccccgacctccaaccccgcagttctgtcc
acggctctggacctggtggacctgagcgacccggcagagacccggcaccaccgggtcacc
aagagtccagtgaggaggacgaccgggtccaggagcccccggcacagaaccagaaccgaa
gagacggagctggtcccggtccagctggagcgccggcctgccggacccggaacccccgac
aggacatccctggactcggtcagcctgtcctctcctctggacaagtgggacgagttggac
ctggacctggaggacgggggacgacgcagacgccgccaggccagatgcacctcccaccac
tcctccagcgagttgctatggtctgcagagtttaggacagatcctctgatgaagagcagc
ttggacgatctggacttcatatctctgaaccaggacaacagcgtgtccagactccgcaga
cggacccgctctctgctgggcaggaacgagtccctggaggacgagttcgtccgcgcgaag
gcggctgtagagtcggacacagagttctgggacaagatgcaggcggagtgggaggagctt
gctcgcaggaactggttggaggagacggagagccagcagaagccggccccgccccccggc
tcacctgtggagaagggttactacttcagcgccaccaacccgtaccttgactggcccaac
gccttcgctgagggtcaggataaagctagagagggagacctgaacgctgccgtcctgctg
ctggaggccgccatcttacaggaccccagtgacgccgaggcgtggcagacgctggggacg
actcaggccgagaacgagaacgaacaggccgccatcgcctcgctgcagaggtgtctggag
ctccgccccaacaacctgccggccctcatggcgctcgccgccagcctcaccaacagcagc
cagctgccggaggcctgcgacgctctgcgccgctggatcggccacaaccacagataccga
cacctggtccagagcaggagtccgctacagggttccccagccacaccacgcaggggcccc
ggctgctccacacctgcaagctcggcgctgcaggaagttctgctgctcttccaggaagcg
gcgcagctgaacgtggataacgtggatccggacctgcagaccggactcggagttctgtac
aacctgagctcagagtttgatcgggcggtggaggcgttcagcgctgcgctgtccgtcaga
ccgcaggactacctgctgtggaaccggctgggagcgacgctggctaacggcagccgcagc
gccgaggcagtggaggcgtacggccgcgcgctgcagctgcggcccggcttcatccgctcc
cgatacaacctgggcatcagctgcatcaacctgggctcgctcagggaggctgtcagtaac
ttcgtcacggctctgaaccagcagaggtgcagccagcgctgcagccagctgcagatgtcc
accaacatctgggccgccctgcggatcgccgtctccatgatggacgaccccgggctggac
cgggccgccagcctgggggacctggacctgctgaccagaaccctggagggcagagacctg
tga
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