Xiphophorus hellerii (green swordtail): 116722093
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Entry
116722093 CDS
T07363
Name
(RefSeq) myomesin-1-like isoform X1
KO
K24495
myomesin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116722093
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116722093
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
116722093
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
C2-set_2
Ig_CD22
C2-set_3
Motif
Other DBs
NCBI-GeneID:
116722093
NCBI-ProteinID:
XP_032422115
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All DBs
Position
6:20115660..20137985
Genome browser
AA seq
1507 aa
AA seq
DB search
MSGSVQVTQKQQQKLQLHQQLEEKQHYESSYYLSTRSSVSKQAFSTHKTSSHRLKTSVKI
DKGQQVVKLSPLPKRAKRTYLAMDKDKEVIGYVIPMFRANHDVVRGLMEAQEDDVTEEGI
NYVAMRNLFVREAREAMEVKVEKKTRSKHVRESAERMEFDRALEEWSEFRKKMHPDRLTH
PPEFIVKPRGQTVWEGKTVRLHCTVAGWPKPRIAWYKNNVLIDAKAHPEKYTAESTYNMH
SLEIKNCDFLDTAQYYVSALNVKGEASSAATVVVKRFQDTEEGPFDPKPHGFCPEHGVTF
HTSIIDKFEVAFGREGETLSLGCTVIIFPTVKKYQPEVVWYRNSVPLKPSKWVHTHWSGE
RATLTLTHLNKEDEGMYTLRVNTKSGFDSYSAYVFVKDADVELEGVPVAPLDVRCHDANK
DYVVVTWKQPAVEGSSPILGYYIDRCEVGTHHWAQCNDAPVKYARFPVTGLVEGRSYVFR
VRAFNNVGVSRPSRISDPVVAMDPSDRARLRAGPLAPWTGVIKFTEEEPTVGVIPGEPTD
VVVTEATKSYVVLAWKPPEQRGHEGVMYYIEKCIQGTDTWQRVNTGMPVKSPRFAIFDLA
EGKSYNFRVRCCNSAGVGEPSVPTGDTIVGDKLDLPSAPGNPVATRNTDTSVVVTWGASK
DVKHLVGYYIESSVTGTDVWMPCNNKPVKQTRFVCHGLTTGSNYVFRVKAVNAAGYSQNS
SNSDAVLVQAAISVPASPTNVNLLEAVKDYMVLGWTAPTDNGGADIRGYFVDYRTVKGNI
YGKWHEMNQKALTTTSYKAENLKENVFYQFQVRAMNMAGVSKPSLPTASLECKEWTITIP
GPPVGLYVMEVRDTSVVVLWEPPVFDGRSPVNGYYLDIKDASAGEEGWKAVHEKTNKGKF
MKVTGLTAGTSYVFRVRSQNLVGVGKPSQDLGPILAQTRPGTKEIYVDVDDNGVISMIFE
CSEMKEGSQFVWFKNYQEITDTSRLTIATQGGKSRAIFNSLSMEDLGTFSCMVTNTEGIS
SSYILTEEALLRLLDLSHEHKFPVIPFKNEMAMELLEKGCVRFWAQMEKFTSACQVEYVF
NDVIIEQGKKYTMKFDKSSGLIELFMDSLEVTDEGTFTFNLVDGKAKGTTSLVLIGDEFR
ELQRKSEFERAEWVRKQGPHFVEYLGFTVTQECDVLLKCKLGNIKPGTEIIWSKDSIEIA
EDDEDAAKIEKKDCDLTFNIGKWVIKQEQKKGRKKPSAKDVLLPPRPKISKQDAGIYEVF
LRDERGKDKSAFNLTEAGYQAVMNELFRVIANSSSDIQIQSSENGIILYSNVTYYDENLR
VGWLHKDAKIAASERVKSGVTGEQLWLKINEPTEKDKGKYTMDIFDGKDGVKRVLDLTGK
AWQDAFEEFQRLKAAAIAERNRARVVGGLPDVVAIQEGKSLNLTGNVWGEPAPEVCWVKN
DKELVSDDHYMLKFEHGKFASITIAAVTTADSGKYALVVKNKYGKEAGEFTVSVYNPDEE
SREDKKD
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggatcagtgcaagtgactcagaagcagcagcagaagctgcagctgcatcaacag
ctggaggagaagcagcactatgagagcagctattacctgagcaccaggtcgtctgttagc
aagcaggccttctcaactcacaagaccagcagccatcgcctgaagacctctgtgaagata
gacaaggggcagcaggtggttaaactgagcccgctacccaaaagagccaaacgtacctac
ctggccatggacaaggacaaagaagtaataggctacgtcattcctatgtttagagcaaac
catgacgtcgtacggggactgatggaagctcaagaggatgatgttacagaggagggtatt
aactatgtggcaatgaggaacctgtttgtcagggaggccagggaggccatggaggtaaag
gttgaaaagaaaacaagatcaaagcatgtcagggaatcagcagagcgcatggaatttgac
agagcgttggaggagtggtcagagtttcgtaagaaaatgcacccagataggctgacgcac
cctccggagtttattgtcaagccccgtggacagactgtgtgggagggcaaaacagtcagg
ctgcactgcaccgtggccggatggccaaaaccaaggattgcttggtataagaacaatgtg
ctgattgatgccaaggcccatcctgagaagtacacagccgaaagcacttacaacatgcac
tccttggagatcaagaattgcgatttcttggacactgctcagtattatgtctccgctctc
aatgtgaaaggggaagcatcctctgcagctactgttgttgtcaaaaggttccaagataca
gaagaaggtccatttgatcccaaaccacatggtttttgccctgagcatggggttactttt
catacaagcattattgacaaatttgaagtggcctttggtcgtgagggggaaacactgagt
ctgggctgcactgtcatcatttttcccactgtgaaaaagtaccagcctgaagttgtgtgg
tacagaaactctgtacctttgaagccctccaagtgggtgcacacacactggtctggagaa
cgcgccactctcactctaacccaccttaacaaggaagatgagggcatgtacaccttgcgc
gtcaacacaaaatccggctttgactcctactcagcctatgtatttgtcaaagatgctgat
gtggagcttgagggggttcccgtggcccccctggatgtgcgttgtcacgatgccaacaag
gactatgtggtggtaacctggaagcagccagcagtggagggcagcagccccatcctcgga
tactacatcgacaggtgtgaagtgggcacccatcactgggctcagtgtaatgatgcccca
gtcaagtacgcccggttccctgttacagggctggtggaggggcgttcttatgtctttagg
gtgcgtgcctttaacaacgtgggagtcagtcgtccatcccgcatctctgatcctgtggtt
gccatggatccttcagaccgagctcgactcagagctggaccactggcaccttggactggg
gtgatcaagttcacagaagaggaacccactgtgggtgtgattcctggagaacctactgat
gttgtggtcactgaggccaccaagagttatgtggtgcttgcctggaagcccccagagcaa
aggggtcatgagggagtcatgtattacattgagaaatgtattcaagggacagacacctgg
cagagggtgaacactgggatgccagtgaagtcccctcgctttgcgatctttgacctggca
gagggtaaatcatacaacttccgtgtgcgatgctgcaactccgctggcgtgggcgagccc
tccgtacccaccggagacaccatagttggtgacaaacttgatcttccctctgccccaggc
aatccagtggccaccaggaacacagatacctcagtggttgtcacctggggggcatctaag
gatgtaaagcacttggttggctattacattgaatctagtgtgacgggaactgatgtgtgg
atgccttgtaacaataaacctgtcaagcagaccaggtttgtgtgccacggcctcaccaca
gggtccaactacgtgttcagagtaaaggcggtgaacgctgctggatatagccagaactcc
tccaattctgatgccgtgcttgtacaggctgctatctctgtacctgcaagccccaccaat
gtgaacctactggaagccgtgaaggactacatggttctgggttggactgcacccactgac
aacggaggagccgacattagaggatactttgtggattacagaacagtgaaggggaacatt
tatggaaaatggcacgaaatgaaccaaaaggctctaaccacaacttcctataaggccgag
aacctgaaggaaaacgtcttctatcagttccaagtccgtgcaatgaacatggcaggtgtg
agtaaaccctctctgcccactgcaagtttggagtgcaaggaatggaccattactatccca
ggaccccctgttggtctctatgtgatggaggttcgtgacacctctgttgtggtcttgtgg
gaacctcctgtgtttgatggacgcagccccgtcaacggctactacctggacatcaaggac
gcgtctgcaggcgaggaaggctggaaggctgtgcatgagaagaccaacaagggaaagttc
atgaaagtgactgggctgacagcaggaacatcctacgtcttccgtgtgcgttctcagaat
cttgttggagttgggaaaccctcccaagatttgggtccaattctggcccagactcgccct
ggtaccaaggagatttatgtggatgttgatgacaacggtgtcatttctatgatttttgaa
tgctctgagatgaaagaaggctcacagtttgtctggttcaagaactaccaggaaatcaca
gacacatctcgtctcactattgccacccagggcggcaaatccagagctatctttaacagt
ctctctatggaggatctgggcaccttctcctgtatggtcaccaacaccgaaggcatctcc
tctagctacattctcactgaggaggccctcctgcgtctcctggaccttagccatgaacac
aagttccctgttattcccttcaagaatgaaatggccatggagctgcttgagaaaggctgt
gtgcggttctgggctcagatggagaaattcacttctgcctgccaagtggagtatgttttc
aatgatgtcatcattgagcaaggaaagaaatacacaatgaagttcgacaagtccagcggg
cttatagaactatttatggactctctggaagtcactgatgaaggaacgtttacctttaac
ctggtggatggcaaggctaagggcactacaagtctagtgctaattggagatgaatttagg
gagctacaaaggaaatctgagtttgagagagcagaatgggtcaggaaacaaggtcctcac
tttgttgagtaccttggctttactgtcactcaagaatgtgatgtgctgctaaaatgcaag
cttggaaatatcaaaccagggactgagatcatatggtctaaggacagcattgagattgca
gaggatgatgaggatgctgcgaaaatcgagaaaaaggactgcgacctgacctttaatatt
ggaaagtgggttattaagcaagagcaaaagaaaggaaggaaaaaaccatctgcaaaggac
gttctcctgccaccaaggcctaaaatctccaagcaagacgcaggtatctacgaggtcttc
ctgagagacgagagaggaaaagataagagtgccttcaatcttacagaagcaggataccaa
gctgtaatgaatgagctcttcagagttattgccaattcttccagtgacattcaaattcag
agttctgaaaatggcatcatcctctactccaatgtgacatattatgatgagaacctgcgt
gtcggctggcttcacaaagatgccaagattgcagcttcagagagagttaagtccggcgtc
acaggggagcagctttggcttaagatcaatgaacccacagagaaggacaagggcaaatac
accatggatatctttgatggcaaggatggagtaaagagagtcttggatctgactggcaag
gcatggcaggatgcatttgaagaattccaaaggctcaaagcggcagcaattgcagaaaga
aaccgcgctcgtgttgttggaggcctgccagatgtggttgcaatccaggagggcaagtcc
ctgaacttgactggcaacgtgtggggcgagccggcgcctgaggtgtgctgggtgaagaac
gacaaggagctggtgtcggacgaccactacatgctgaagtttgagcatggcaagttcgcc
agcatcacaatcgcagctgtcaccacggccgactccggcaaatacgccctcgtggtgaag
aacaagtacggcaaggaggccggcgagttcactgtcagcgtgtacaaccctgatgaggag
agcagagaggacaagaaagactaa
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integrated database retrieval system