KEGG   Xiphophorus hellerii (green swordtail): 116722138
Entry
116722138         CDS       T07363                                 
Name
(RefSeq) vertebrate ancient opsin-like
  KO
K04256  c-opsin
Organism
xhe  Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xhe01009]
    116722138
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:xhe04030]
    116722138
Protein phosphatases and associated proteins [BR:xhe01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116722138
G protein-coupled receptors [BR:xhe04030]
 Rhodopsin family
  Vision
   Opsin
    116722138
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srw 7TM_GPCR_Srx 7TM_GPCR_Srsx 7TM_GPCR_Srv DUF2189 PMT_4TMC
Other DBs
NCBI-GeneID: 116722138
NCBI-ProteinID: XP_032422206
LinkDB
Position
6:6177826..6271146
AA seq 406 aa
MLASNASLGGCAEFNSALCAGAGEGQPGGGSLRTTLSPTGHLVVAVCLGFIGAFGLLSNL
LVLVLFCRYKMLRSPINLLLINISVSDLLVCVLGTPFSFAASTQGRWLIGAEGCVWYGFA
NSLCGIVSLISLAVLSYERYSTMITPTEADSSNYRKTSLGILLSWVYSLLWTLPPLFGWS
HYGPEGPGTTCSVDWTAKTANNMSYIICLFVFCLIGPFLVIVYCYGKLLYAIKQVSGINA
SLSRKREQRVLLMVVIMVICYLLCWMPYGIMALLATFGPPGLVTPEASIIPSVLAKTSTV
INPVIYVFMNKQFYRCFRALLHCAAPRRGSSLKSSSKAGTKAVKGVAVTGPRRTDDLLFM
VASLGKPAATVPQLGPSCEPTIDFTKAPSSYNQPVVVVSLVAHSEG
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgctcgcgtccaacgcgagcctcggcggctgcgcggagttcaacagcgccctgtgcgcc
ggagccggggaagggcagccggggggcggttcgctccggaccaccctcagcccgacgggg
cacctggtcgtggccgtgtgcctcggcttcatcggagcgttcggactcctcagcaacctg
ctggtgctcgtcctgttctgccgctacaagatgctgcgctcccccatcaacctgctgctg
atcaacatctccgtcagcgacctgctggtgtgcgtgctcgggactccgttcagctttgcg
gccagcacgcagggacgctggctcatcggagcggagggatgcgtgtggtacggcttcgcc
aactccctctgcggcatcgtgtccctgatctccttggctgtcctctcctatgagcgctac
agcaccatgataaccccgaccgaggccgactcctctaactaccgcaagacctccctgggc
atccttttgtcctgggtctactctctcttatggacccttccaccgctctttggctggagc
cactacggtccagagggccccggaaccacctgctcagtcgactggacagcaaagactgcg
aataacatgtcttacatcatctgcctgtttgtgttctgcctcatcggacctttcctggtg
atcgtctactgctacgggaaactgttgtacgccatcaaacaggtgagcgggatcaacgcg
tcgctgagcaggaagcgcgagcagcgcgtcctgctcatggtggtgatcatggtgatctgc
tacctgctctgctggatgccgtacgggatcatggcgctgttggccaccttcgggccgccc
ggcctggtcacgcccgaggcgagcatcatcccctcggtcctggccaagaccagcaccgtc
atcaacccggtcatctacgtcttcatgaataaacagttttacagatgtttccgagccctg
ctgcactgtgccgctcctcgcagaggctccagcttgaagagctcttccaaggccggtacc
aaagctgtgaagggagtggcggtgaccggcccccgccggaccgacgacttgttgtttatg
gtcgcctctctgggcaaaccggctgccactgtaccccagctgggcccgtcctgtgaaccg
accattgacttcaccaaagccccgtcgtcttacaaccaacctgtggttgtggtttcactg
gtggcccactctgagggctga

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