Xiphophorus hellerii (green swordtail): 116722218
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Entry
116722218 CDS
T07363
Name
(RefSeq) neural cell adhesion molecule L1.1-like isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116722218
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xhe04515
]
116722218
04090 CD molecules [BR:
xhe04090
]
116722218
04091 Lectins [BR:
xhe04091
]
116722218
Cell adhesion molecules [BR:
xhe04515
]
Immunoglobulin superfamily
L1 family
116722218
CD molecules [BR:
xhe04090
]
Proteins
116722218
Lectins [BR:
xhe04091
]
I-type lectins (Siglecs)
116722218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
C2-set_3
Tissue_fac
C1-set
CRLF2-like_D2
Receptor_2B4
fn3_2
Motif
Other DBs
NCBI-GeneID:
116722218
NCBI-ProteinID:
XP_032422311
LinkDB
All DBs
Position
1:complement(31369140..31411015)
Genome browser
AA seq
1360 aa
AA seq
DB search
MCAPQRLWMGCRGRCPPVLPFLLLPLYFLFAQGAIIIPEHYNLQLLQTPPKLTVVPRSVT
AFSREDVVLTCNATGSPTPLIRWVKDGVQFGTEKRGSGKINASEDEETMELESYAGVYQC
FASNDLGTAMTQTVEVIVEPHPVVAKENEVDKSAYESESLILTCNPPKRSTPPYIYWMGT
KMRHIPQNERVMIGLDGNLYFANLIKTDSRSDYNCYAQYTAARTIIPVTVARLTVQSSNE
IVRGRKPDLLQPHGSHTAVQALRGQSVTLECIPKGLPTPWVEWQKTDGDLKTTSASLDSF
DRWLYFDSITEDDDGEYRCRAHNVHGNATHSFTVTVKAAPYWVKEFPDLTYAPGETVRLD
CLAKGNPEPAITWRINGEPLTAVDEDPRRSVTGSALILRDVVVSDTAIYQCEAANVHGSM
LQNINLFVVELPPQILSSDGIVYKVFEGEQVSMDCESFGAPRPQITWLREDSVPLLLDNR
VSLFTNGTVELVNVTHEDSSAYTCSVDNTDISITANLEVFNQTVILKGPRDVHIHRGQTA
YLDCHFYKDPRLRANVQWKKDGQHLNFPMPNKSRYSLHKNHTLQVKKAQQDDTGKFSCEI
RTDPVGQVTAAGSITVLAPPDPPGSVSLSPIEDYSTTLSWIPGSSHNSPITEFIVEAEEK
PQTDSGAAAWRKWTTVPGDFSHFQLSLQPFCRYRFRVTAVNELGQSKASEPTEPRSTPPA
APRSNPTNVRTNSTEPGVLLITWDEMEKRLHNGQDFQYRVYWREADNKNADWNWSYVKSP
PFTVNNTGTFTPFEIKVQAVNAIESGPTPEANTGHSGEDKPEEPPTGVAFSVVNSTVRVT
WNEAQNVRGHLLGYRLYIRRLGSSSGRDRRSLGKHHHTAERHRLEQHKLANRNNWVVEVH
GPKTVTEVTGLRLFSQYELELTAFNSKGESPRSSPTRFNTPEGAPGPPASLRFESPAETS
LILHWTPPHEVNGELQGYEVQYQQEGGSQMEIQMINVFNVNQVELKNLDPSSYYLFKVIA
RTAAGQGPPITRRGATLLEGAPPTNITVVSSVTSLNLSWVPEDRHRNHGFHIHYLRKSAG
GQWEESELINSTQGFYSLTGLQPGTEYSLRILHDNNTHWQEMLRTVGPVPSEMPGRFATQ
GWLIGLISAIVLLILILLILCLIKRSRGGKYAVKDKEKKEIDFDLQNKDETFGEYRSLES
DGDEKRSDSQRSLCDDSKLGSEDSLAEYGDSVDIQFNEDGSFIGQYSGRSAAAAAPHGSS
GPASPLNPGAAAALRSLHVRHPEPAQLDPEPEPPTRACLQQNGRDGPDSTSWFRHPQEVL
LSMFTAFDAKLLTVRKINKFGSFRETNISLLNSFHCLILQ
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcgccgcagcgtctgtggatgggctgtagggggcgttgtccccctgttctcccc
ttcctcctcctccctctgtacttcctgtttgctcagggagccatcatcatcccggagcat
tataatttacagctcttgcaaacgcctcccaaactgacggtggttcccagatcggtgacg
gcgttttcccgagaagacgtcgttctgacctgcaacgccaccggcagcccgaccccgctg
atccgctgggtgaaggacggggtccagttcggcacagagaagaggggttctggaaagatt
aacgcctcagaagatgaagaaacgatggagctggagtcttacgctggcgtctaccaatgc
ttcgcctccaacgacctgggcaccgccatgacacagaccgtagaggtcatagtggagcct
catccggttgtagcaaaagaaaacgaagtggataagtcggcgtatgaatcagagagcctg
atcctgacctgtaaccctccgaagaggtcgacgcctccgtacatctactggatgggaacc
aagatgcgtcacattccccagaatgagagagtgatgatcggcctggacggaaacttgtac
ttcgccaacctcattaagaccgacagcagaagcgactacaactgctacgcccagtacact
gcagccaggactattatcccagtgactgtggctaggctcaccgtccaatcaagtaacgaa
atcgttcgtggaagaaaaccagatttactccaaccccatggctcccacaccgcagtgcag
gccctcaggggtcaaagtgtcaccctcgaatgtatccccaaaggcctgccgactccctgg
gtggagtggcagaagacggacggcgacctgaagaccacgagtgcctcgctggacagcttc
gaccgctggctttacttcgacagcatcaccgaggacgacgacggcgagtaccggtgcagg
gcgcacaacgtccacgggaatgctacacattccttcaccgtcactgtgaaagcggctccc
tactgggtgaaggagttcccagacctgacgtacgcgccgggggaaaccgtgaggctggac
tgcctggccaaggggaatcccgaacccgccatcacctggagaatcaacggcgagccgctc
acagcggtggacgaggatcctcgccgcagcgtgactggcagcgcgctgatcctgagggac
gtggtcgtttctgacacggccatctatcagtgtgaagccgccaacgttcacggctccatg
ctgcagaacatcaacctgtttgtcgtcgagctcccgcctcagatcctgtcttctgatggg
attgtgtacaaagtgtttgaaggtgaacaagtcagcatggactgtgagtcgtttggggct
ccccgacctcagattacatggctgcgtgaggactccgttcctctgctgttggataatcgc
gtttccttattcaccaatgggacggttgaactggtcaacgtcacccatgaggacagcagc
gcctacacctgctctgttgacaacacggacatctccatcaccgctaacctggaagtcttc
aatcaaactgtgattcttaaaggtccgcgggacgttcacatccaccggggacaaactgct
tacctggactgtcacttctacaaagatcctcggctgcgtgccaacgtccagtggaaaaaa
gacggacagcacctgaacttcccaatgcctaacaaatccaggtacagtctccacaagaac
cacaccttacaggtgaaaaaagcccaacaagacgacacaggaaagttttcctgtgagatc
agaactgacccagtgggccaggtgacggccgccggctccatcactgtgttagctccaccg
gacccccccggctcggtatcgctgtcccccattgaggactacagcaccaccctcagctgg
atcccaggatcttcacacaacagcccaataacagagttcatcgttgaagccgaggagaag
ccgcagacggacagcggcgccgcggcgtggaggaaatggacgacggttcctggagatttc
agccacttccagctcagcctgcagcctttctgccgctaccgcttcagggtcaccgccgtg
aacgaactgggccaaagcaaagccagcgagccaaccgagccgcgcagcactccgcctgca
gcgccacgttcgaaccccacgaatgttcgcaccaactccacagagccgggcgttctgctc
atcacctgggatgagatggaaaaacgtctccataacggccaggacttccagtaccgggtg
tactggcgggaggctgacaataaaaacgcagactggaactggtcctacgtcaagtctccg
ccgttcacggtgaacaacacgggaaccttcacgccgtttgagatcaaagtccaggctgtc
aacgcgatcgagtcgggaccgactcccgaggcgaacactggacactccggggaggacaag
ccggaggagccgcccaccggcgttgccttcagcgttgtgaacagcaccgtcagagtgacg
tggaacgaagcgcagaacgtccgcggccacctgctgggctacaggctgtacatcaggagg
ctgggttcctccagcggacgggacaggagatctctcggcaaacaccaccacacggcggag
agacaccgactggagcaacacaaactggcaaacaggaacaactgggtggtggaggtccat
ggtcccaagacggtcactgaggttactggcctgcgtctgttctcccagtacgaactggag
ctcaccgccttcaacagcaaaggggagagccctcgctcctcaccgacgcgtttcaacacg
ccggagggagctcctggtcctcctgcatctctgaggtttgaaagcccagcggaaacctct
ctgattcttcactggactcctccgcatgaagttaacggagaacttcagggctacgaggtg
caatatcagcaagagggaggcagccagatggagatccagatgatcaatgttttcaacgta
aaccaggttgaactgaagaatctggacccaagcagctattacctgtttaaggtcatcgca
cgcaccgcagcaggacagggtccgcccatcacacggaggggcgccacgctgctggaagga
gctcctcccacaaacatcaccgtggtttccagtgttacgtcgctcaacctgagctgggtg
cctgaagaccgccaccggaaccacggcttccacatccactacctccggaagagcgctggt
ggtcagtgggaggagtcagagctgatcaactccacgcagggtttctattcgctgacgggc
ctccagccaggaaccgagtacagcctgaggatcctgcacgacaacaacacgcactggcag
gaaatgctgcggaccgtcggaccagtgccgtcggaaatgccgggccggtttgccacccag
ggctggttgattggactcatcagcgccatcgtgctcctcatcctcatcctcctcatcctc
tgcctcattaagcgcagcaggggggggaaatacgcagtgaaggacaaagagaaaaaggag
atcgacttcgaccttcagaacaaggatgaaaccttcggcgagtacagatctctggagagc
gacggagacgagaagcgctcggacagccagcggtccctgtgcgacgacagcaagctgggg
agcgaggactcgctggccgagtacggggacagcgtggacatccagttcaacgaggacggc
tccttcatcggccagtacagcggccgctccgccgccgccgccgcaccgcacggcagctcc
ggcccggcctcccctctcaacccaggcgccgccgccgcccttcgctccctccatgtccgg
catcctgaaccggcccagctagatccagaaccagaaccgcctacacgtgcatgcctgcag
cagaacggcagagacggacctgattccacttcctggttccgacatccacaggaagtttta
ctctccatgtttacagcttttgatgcaaaactgctaactgtaagaaaaattaacaaattt
ggctcctttagagaaacaaatatatctttattaaattcattccactgtctgattctgcag
tga
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