Xiphophorus hellerii (green swordtail): 116722234
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Entry
116722234 CDS
T07363
Symbol
toe1
Name
(RefSeq) target of EGR1 protein 1
KO
K13202
target of EGR1 protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116722234 (toe1)
Spliceosome [BR:
xhe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116722234 (toe1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CAF1
zf-CCCH
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
116722234
NCBI-ProteinID:
XP_032422332
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Position
6:7741057..7745624
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AA seq
505 aa
AA seq
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MSSSIVVPVIDVHSNNFKELWPAMVVAIKTSSFIAIDTELSGLGNRKSLLAESIEDRYNA
ICHAARSRSILSLGIACYKKLDQKPPDSYLVQVYNLTLLCSEEYIIEPQSVQFLVQHGFD
FNKQYGSGIPYCKGNNKGGSDDRGVHIRALFTELLRARKALVLHNGLIDMAFLYQSFYAH
LPERLATFTADLSEMFPAGIYDTKYVTEFELRLTASYLEYAYKKCKLENSRSVTSGSDGP
HVHLEFCQYAGDLSTYVDYRQCPAVTSIEGHTDVCQRFSAFGWCPNGTKCPLSHDTDLII
LQDEKCKDEKRKKRKRRREKKGPSDIAEDCSAFDGTPKDKIPNMEADKEEAAGDQMEAHE
KSRTDGNSRMDDGWDTKTDDDEENGVGEETNPGDSAASAGEGTGVRSAESKAEAKKKADA
GSHRAGFDAHMTGYIFAYACALLKKEAEPGPERTDAKPEESWLPVCVNKIYLSGKAAPLN
VVKSTFAKSSKAHVQKMEMVWGQKM
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttcgatagtagttcctgtaattgatgtccatagtaacaatttcaaagaacta
tggccagccatggtggttgcaattaaaacatcatccttcattgcgattgacacggaactg
agtggtctgggaaacagaaagtccctgttggctgaatcaatagaggacagatacaacgca
atatgtcacgctgctcgctctcgctccatcctttctttgggaattgcgtgttacaagaag
ctggaccaaaagcctccagactcctacctggtccaggtgtacaacctcaccctgctgtgt
tcagaggagtacatcatagagccgcagtcggtccagtttctggtgcagcacgggtttgac
tttaacaagcagtacggcagtgggatcccgtactgcaagggcaacaataagggaggttca
gacgaccgtggggtccacatccgagctttgtttactgaactgctgcgagccaggaaggcc
ctggtgctacacaacggcctcatcgacatggccttcctctaccagagtttttatgcccac
ctccccgagcggctggccaccttcacagccgacctgtcggaaatgtttcccgctgggatt
tacgacaccaaatacgtgactgaatttgagctgcggctgaccgcctcatatctggagtac
gcctacaagaaatgcaagctggaaaacagccgcagtgtcacttctggctcagatggacct
cacgtccacctggaattttgccagtacgcgggtgacttgtccacctacgtcgactacaga
caatgtccggccgtaacatccatagagggacacacggatgtctgccagcgcttctcagct
ttcggctggtgtccaaacggcaccaagtgcccgttgtcccacgacacagacctgatcatc
ctgcaggatgagaaatgcaaagatgaaaaaaggaaaaagcggaagagacgcagggaaaaa
aaagggccatcggatatagccgaggactgctccgccttcgacggcaccccaaaggataaa
ataccaaacatggaagcggacaaggaagaagcagccggcgaccaaatggaggcgcacgaa
aaatcgcgcaccgatggaaactcccgcatggacgacgggtgggacacgaaaaccgacgac
gacgaagaaaacggagtcggtgaagaaacgaaccccggagactctgcggcgagcgccgga
gaaggcaccggcgtccgttctgcagagtccaaggccgaggcgaagaagaaggcggacgcg
ggatcgcaccgggcaggctttgacgcccacatgacgggatacatcttcgcctacgcgtgc
gcgctcctcaagaaggaggcggagcctgggccggaaagaaccgacgccaagccagaagag
tcctggctccccgtctgcgtcaataagatctatctcagcggcaaggcagcgcccctcaat
gtggtgaaaagcaccttcgccaagtcatccaaggcccacgttcagaagatggagatggtg
tgggggcagaagatgtag
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