Xiphophorus hellerii (green swordtail): 116722249
Help
Entry
116722249 CDS
T07363
Name
(RefSeq) contactin-associated protein-like 4
KO
K24337
contactin associated protein-like 3/4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116722249
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
116722249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
Motif
Other DBs
NCBI-GeneID:
116722249
NCBI-ProteinID:
XP_032422347
LinkDB
All DBs
Position
6:complement(25871995..25976646)
Genome browser
AA seq
1310 aa
AA seq
DB search
MESKRVAGIIPRVARLLLLLGLFGTTAEEECDSPLVSNLLPSSFRSSSQLSSSHAPGFAK
LNRRDGAGGWSPLTSDRHQWLEVNLGERTKITAVATQGRYGSSDWLTSYQLMFSDTGHNW
KQYRQEDSIGSFPGNSNADSVVQYKLQQPVVARFLRLIPLDWNPNGRIGLRLETYGCPYT
FDVVTLDGSSSLVYRLNPGSTRAQRDVITLKLKTLRNSGTLLQAEGREGLGLRLELDRGK
LLLLFRRGRTLSAEPQRLAALGSLLDDQHWHHVAVELHGLHLNLTVDKHTLRVKIPPQFH
HLDIQELSVGAVQALGSHKPFHSKRNFHGCLENLLFNGLNLIELAKVKDHKVSLVGNVTF
SCAEPVPVAVTFPGLQSFLQLPWTTPSSSGSVSIGFQFRTWNKAGLLLTFELPQQGGVAW
LFLNEAKLRLQIQKGGRVLLELSAGSALSDGQWHSVALTSGRSHLSVCVDKDEGGSAQAS
PSFPVAVESHLFFGGCPAGDAPGCRNHFSSFQGCMRLLSLDGRIMDLIAVQQLGNYSNLQ
IDMCGIIDRCSPSRCEHGGYCSQTWTVFHCNCSDSGYSGATCHSSVYEQSCEAYKHSGNT
SGYFYIDVDGSGPIKPQLVYCNMTESDTWMIIQHNNTELTRLRPVSGVDQQLLHFSYSSE
EEQLLGSIGQSEHCEQELSYHCRKSRLLNTPEGSPFSWWLGGRAPGREQTYWGGAHPGSQ
QCGCGLRGDCVDPQHYCNCDADRLEWTEDSGLVTHKESLPVRSLVLGDLQRPGSEAAYRV
GPLRCYGDKNFWNAAFFDKETSYLHFPTFHGELSADISFFFKTTSSSGVFLENLGIKDFI
RIELSTSARVVFSFDVGNGPLEVKVESTVPLNDNRWHRVRAERNIKEASLRLDDLPVATQ
EAPADGHVHLQLNSQLFIGGTASRQRGFRGCIRALQLNGVTLDLEERAEMTPGVRPGCPG
HCSSYGSLCQNQGRCVERAAGFHCDCSLSAYTGVFCQTELSASFKPGTSVRYTFKEQYEL
TRNSSALPPSIYSDTTLRGENVSMSFRTAQSPALLLYIGSYYREYMAVLINKHDKLEVRY
KLEGNRDAEVLRSSSARNLANGQLHSVTIRRLTHTVSVQVDQNAREDFNLTSDGEFNAIK
SLVLGKVHESGDLDSHLARLASLGFTGCLSVVQFNSINPLKAALLHPDTSPIIITGPLVR
SNCGSAASANPYAAENIHHISDRSGSVGSGQPLVNAIRTDSALIGGIIAVVIFVVLTGLA
VAARYLYRRKDTYRNQEGNAVKQEDSPDFPFNNQTDSQNLSSENPKEYFI
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggagtctaaaagagtcgctgggattattcctcgggttgcccggcttcttctccttctt
ggcttgttcgggacaaccgcagaagaagagtgtgacagccctttggtgtccaacctgctg
ccttcatcctttaggagctcctcccagctgtccagcagccacgcaccgggattcgctaaa
ctcaaccggagagacggagctggaggctggtcccccctcacctcagaccggcatcagtgg
ctggaggtgaacctgggcgagcggaccaagattacagctgtcgccacacagggccgctac
ggcagctctgattggctgacgtcttaccagctgatgttcagcgacacgggacacaactgg
aagcagtacagacaggaggacagcatagggtcttttccaggtaactctaatgcagacagc
gtggttcagtacaaactgcagcagccggtcgtggcccgcttcctgcgcctcattcctctg
gactggaatcccaacgggcggatcggactgcgcctggagacctacggatgtccgtacacc
tttgatgtggtgactttggatggcagcagcagtttggtgtacagactaaatcctgggtca
acgcgggctcagagagatgtcatcacattgaagctcaaaaccttgagaaactccgggacg
ctgctgcaggcggagggaagggaaggactcggcctccgtctggagttagacagaggaaag
ctgctgctgctgttcagacgaggtaggactttatctgctgaacctcaacgtcttgcagct
cttggaagccttttggatgatcagcattggcaccatgtggcagtggagctgcacggcctt
cacctcaacctcacagtggataaacacacactgagggttaaaatcccgccacagttccac
cacctcgacatacaagagctgagcgtgggggcagttcaggctctcgggtctcacaagcca
tttcactccaagaggaacttccacggctgcctggaaaacttgctgttcaacggtctcaac
ctgatcgaactcgctaaagtcaaggaccacaaagtttctctagtgggcaatgtgaccttt
tcctgtgccgagccagttcctgttgccgtgacgtttcccggcctccagagcttcctccag
ttgccatggacaacgccgtcgtcttcggggagcgtgtcgattgggtttcagtttcggacc
tggaacaaggcggggcttctgctcacctttgagctccctcaacagggaggcgtggcctgg
ttgtttctgaacgaggcgaaactccgcctccagatccagaaaggaggacgggttctgctg
gagctcagtgcaggttctgcactcagtgacggccagtggcattcagtggcactgacctcc
ggtcgaagtcatctgagtgtctgtgtggataaagatgaaggcggcagcgctcaggccagc
ccgtcatttcctgtcgcagtagaaagtcacctcttcttcggtggttgtcctgctggagat
gctccaggatgtagaaatcacttcagttccttccagggctgcatgcgtttactcagtctg
gacggcaggattatggacctgatcgcggtgcaacagctgggaaattacagcaacctgcag
attgacatgtgtggaataattgacaggtgctctccgagtcgctgtgaacatggcggctac
tgcagtcagacctggaccgtcttccactgcaactgctccgacagcggctacagcggcgcc
acctgccacagctctgtgtatgagcagtcctgtgaagcgtacaaacacagcggcaacacg
tcgggatatttttacatcgacgtggacggcagcggacccatcaaaccacagctggtctac
tgcaacatgacagaaagcgacacatggatgattatccagcacaacaacactgagctgacc
agactgcgaccagtttctggtgtggaccaacagttgctccacttcagctactcatctgaa
gaggagcagcttttaggctccatcggccaatcagagcactgtgaacaggaactatcctac
cactgcaggaagtcccgccttctcaacaccccagaggggtctccgttcagctggtggctc
ggcggccgcgcccccggccgtgagcagacgtactggggaggagctcatccaggcagccag
cagtgtggctgcggcctgcggggcgactgcgtggatccacaacactactgcaactgtgac
gcagacagattggagtggactgaggactcaggcctggttacccataaggaaagcctccca
gtcagatctctggtattgggtgacctccagaggccggggtcagaggcagcgtacagggtg
ggaccactccgttgctatggagacaagaacttctggaacgctgcattttttgacaaggag
acatcataccttcacttccccaccttccacggtgagctgagcgcagacatctccttcttt
tttaagaccacttcttcctctggagtattcctggaaaatcttggcattaaggacttcatc
cggatcgaactaagcacgtctgctcgggtggttttctccttcgatgttggtaacggccca
ctggaagttaaagtcgagtcgacggtcccgttgaatgacaaccgatggcatcgagtccga
gccgagcggaacatcaaggaggcgtcgcttcgactggacgacctgcctgtggcgacgcag
gaggcgccggctgacggacacgtccacctgcagctcaacagccagctgttcattggaggc
acggcgtccaggcagaggggtttcagaggctgcatccgcgctctgcagctgaacggtgtt
actctggacctggaggaaagggcagagatgacgcctggcgttcggcccggctgcccgggt
cactgcagcagctacggctcgctgtgccagaaccagggccgctgtgtggagagagccgct
gggttccactgcgactgcagcctgtcggcttacactggagtcttctgccagacagagctg
tcagccagtttcaaacctggaacgtcggtcagatacaccttcaaggagcagtatgagttg
actagaaacagcagcgctctaccgccctccatctactccgacacaacgctgagaggagaa
aatgtctccatgagtttcaggacggctcagagtccggccctgctgctttacatcggctct
tactacagagagtacatggccgtgctcatcaacaagcacgataagctggaggtgagatac
aagctggagggcaaccgagacgctgaagtgttgaggagcagcagcgcgaggaacctggcc
aatggacagctgcacagcgttaccatcaggagactgacgcacacggtgtctgtgcaggtt
gaccaaaatgccagagaagacttcaacctcacgtctgacggagagtttaatgccatcaag
tcgctggtgttgggcaaagtacatgagtctggtgatttggactctcatctggcacggcta
gcgtctctgggtttcaccggctgcctgtcagtagttcagttcaactccatcaatcctctg
aaagctgctctgctccacccagacaccagccccatcatcatcactggacctttggttcgg
tccaactgtggctctgcagcctcagccaatccctatgcagctgaaaacattcaccatata
tcagaccggtccggctcagtgggctcaggtcaacctttagtcaatgccatcaggaccgac
tcggctctgattggaggtatcatagcggttgtcatcttcgtggttctgaccggtttggcc
gtcgccgcgcggtacctctaccggaggaaggacacatatcgaaaccaggaggggaacgca
gtcaaacaggaagacagtccagatttccctttcaacaaccagactgactcccagaacctg
tcctctgaaaacccaaaggagtattttatctaa
DBGET
integrated database retrieval system
