Xiphophorus hellerii (green swordtail): 116722355
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Entry
116722355 CDS
T07363
Symbol
pold3
Name
(RefSeq) DNA polymerase delta subunit 3 isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03030
DNA replication
xhe03410
Base excision repair
xhe03420
Nucleotide excision repair
xhe03430
Mismatch repair
xhe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116722355 (pold3)
03410 Base excision repair
116722355 (pold3)
03420 Nucleotide excision repair
116722355 (pold3)
03430 Mismatch repair
116722355 (pold3)
03440 Homologous recombination
116722355 (pold3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116722355 (pold3)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xhe03032
]
116722355 (pold3)
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116722355 (pold3)
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116722355 (pold3)
DNA replication proteins [BR:
xhe03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
116722355 (pold3)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
116722355 (pold3)
MMR (mismatch excision repair)
DNA polymerase delta complex
116722355 (pold3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
116722355
NCBI-ProteinID:
XP_032422485
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All DBs
Position
6:26045434..26050372
Genome browser
AA seq
437 aa
AA seq
DB search
MDELYLDNIDEYVNDHNKIVTYKWLSLTLGVHVNTAKQMLYHYLEHKRKESSPQLHATYL
VSGKLEDKGQMCHKVSVVREDQLEDFKSKMSLIVSVHVYSVQKALLKDSGPLYSVDYDVI
KDNLNNCSRYSAIRCAGAVPMSAAELQQVQEIQRAPSSAPENKKSAMNGDANIASKPSSK
PQKGIMGMFANKSAPKNQDNSKEVKPEPKEESPVPEAPKTKPAAKSSLMANFFGTPEKPE
KPVEKQQEAQLAIASEQQHQRTTAEEPAAVQLHKETKADSRSKSKRMEESDSEEEKMEKK
KRRRIKKPQPDSSDEDVIPDSPPQMKTSEPSPKKEPETVHHSHTSSGTKIRRRRKVLKSR
TFTDEEGCIVTEKDYVSESYSETEDDFQSTKQAPRNNNKAKPTSSSKDDDKKTQKKSSAS
SNKGSKQASIMGFFQKK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctttatttggataatattgacgaatatgtcaacgatcacaacaaaatagta
acctataagtggctcagtctgactctcggagtccatgttaacacagctaaacagatgctt
taccattacttggagcacaagaggaaggagagctcacctcagctccacgccacatacctt
gtgtctgggaaacttgaggacaaaggtcaaatgtgtcacaaggtgtctgttgtcagagaa
gaccaattggaagatttcaaatccaaaatgagtttgatagtgagcgttcatgtctacagc
gtccagaaagctttgctcaaagacagcggccccctctacagcgtcgactacgatgtcatt
aaagacaacctgaataattgcagcagatacagcgcgatccgatgtgccggagcggtgccc
atgtctgcagcggagctgcagcaggtccaggaaatccagcgagctccttcatcggcgcct
gaaaataaaaagtccgccatgaacggagacgccaacattgcctccaaaccatcaagcaag
ccgcagaaaggcatcatgggaatgtttgcaaataaatctgcacccaaaaatcaggataac
agcaaagaagtcaagcctgaacccaaagaagaatctcctgtgccagaggctccaaaaacc
aaaccagcagcgaagtccagtctgatggccaacttctttggaactccagaaaaaccagag
aaacctgtggagaagcagcaggaggctcagttggccatcgcatcagagcagcagcatcag
agaacgacagcggaggaacctgcagccgtgcagctgcacaaagaaaccaaagcagactcc
aggagcaaatcaaagcgaatggaagagtctgatagcgaggaggagaaaatggagaaaaag
aagaggcgaaggatcaagaaaccacaaccagacagcagcgatgaagacgttattccagat
tctccacctcagatgaaaacaagcgagccgagtcctaaaaaggagcctgagactgtccat
cattcacatacgagctctggaaccaaaataaggaggaggagaaaagtcctgaagtcacgt
acctttacggatgaggaaggatgcattgtaacagaaaaagattacgtgagcgaatcttac
tctgagacagaggatgactttcagagcaccaaacaagctccacgtaacaacaataaagca
aagccaacgtcgagcagcaaagacgacgacaaaaagactcagaagaaatcatcagcaagc
tcaaataaaggaagtaaacaagcttccattatgggattcttccaaaagaaatga
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