Xiphophorus hellerii (green swordtail): 116722358
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Entry
116722358 CDS
T07363
Symbol
gata6
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor GATA-6
KO
K17897
GATA-binding protein 6
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116722358 (gata6)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
116722358 (gata6)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
116722358
NCBI-ProteinID:
XP_032422491
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Position
6:19092150..19100101
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AA seq
491 aa
AA seq
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MDLGENSWSMVKREVSSSPGSPAEQSYLPGDSSRRDGPTPPSELDALGHRRPDGRSLHPY
LHFGHHGNAATAGEDIPLFTDLDQGSKLVLSAGAHKASLLVDPADMYQTLAIAAAQSQTG
YDSSSAGYMHSSPNSPVYVPSSRVNPMISSLSYLQAGGSAQAGHAVSSHSVWSQSTPESP
SSYSAGSPHTSSRYHYPPSPPMNNGTPRDSSYTNTLNVSSRDQYGLSRPLSGTYANPYSP
YVAPQLPSPWTGGHFDNTMLHTLQSRGAPLIRGPNGVSDILDDMAESRECVNCGSISTPL
WRRDGTGHFLCNACGLYSKMNGLSRPLIKPQKRTSTSRRIGLSCANCQTSTTTLWRRNAE
GEPVCNACGLYTKLHGVPRPLAMKKEGIQTRKRKPKTLSKTKGSSGTNNSVSMTPTSTSS
SNSEDCSKTSSPSAQVSGVSSSVLPGSGEGAGSGSAVKYPGQDSLYTSVGLTQSSDVASV
RGEPWCPIALA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggacctgggtgaaaacagctggtccatggtcaagcgagaagtttccagcagcccaggc
tcgccggccgagcagagctacctgcccggtgacagcagcaggagagacgggcccacgcct
ccgagcgagctcgacgcgctgggccaccgccgtccggacggcaggtcgctgcatccctac
cttcacttcggacatcacggcaacgctgcgaccgccggcgaggacatcccgctgtttacg
gacttggatcaggggagcaagctcgttctctccgccggagcgcacaaggcaagcctgctg
gtggaccccgccgacatgtaccaaactttggcaatcgccgcagcccaaagccagactgga
tatgattcctcctccgctggttatatgcactccagccccaactccccggtctacgtgccc
agctcccgggtgaacccgatgatttccagtctttcctacctgcaggccggtggttccgcg
caggccggccacgcagtctccagccactcggtgtggtcgcagtccaccccggagagcccg
tcgtcgtacagcgcagggagcccgcacacctccagccggtaccactatcctccgagtccg
cccatgaacaacgggacacccagggacagcagctacacaaacacgctgaatgtgagcagc
agggaccaatacggcctctcccgacccttaagtgggacctacgctaacccatactcccca
tatgtggcacctcagctgccctcaccttggaccgggggacattttgataacaccatgctg
cacactttgcaaagcaggggtgcgcccctgattagaggtccaaacggagtttcagatatc
ctggacgacatggcggagagcagggaatgcgtgaactgcggctccatctccacgccgctg
tggaggcgcgacggcacgggccactttctctgcaacgcctgcggcctctacagcaaaatg
aatggccttagccggccattaattaaaccgcagaaaaggacgtcaacctccagaagaatc
ggcctctcctgcgcaaactgtcagaccagcacaacgaccttgtggcgcaggaacgcagaa
ggagaaccggtgtgcaatgcatgcggactctacactaagcttcatggagtacctcgaccg
cttgccatgaagaaagagggaatccagacacgaaaaagaaaacccaaaactttgagtaag
accaaaggatcctcgggcaccaacaactctgtctccatgactcccacatccacgtcctca
tccaattctgaagactgctccaaaaccagctctccctctgcacaagtgtcaggggtcagc
tcgtccgtgctgccaggctctggggagggagccggctcgggctctgcggtgaaataccct
ggacaggacagcctgtacaccagcgtgggcctgacccagtcatcagatgtagcttcagtg
aggggggaaccctggtgccccatagctttagcctaa
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