Xiphophorus hellerii (green swordtail): 116722520
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Entry
116722520 CDS
T07363
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116722520 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116722520 (hspd1)
03110 Chaperones and folding catalysts [BR:
xhe03110
]
116722520 (hspd1)
03029 Mitochondrial biogenesis [BR:
xhe03029
]
116722520 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116722520 (hspd1)
Enzymes [BR:
xhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
116722520 (hspd1)
Messenger RNA biogenesis [BR:
xhe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
116722520 (hspd1)
Chaperones and folding catalysts [BR:
xhe03110
]
Heat shock proteins
HSP60 / Chaperonin
116722520 (hspd1)
Mitochondrial biogenesis [BR:
xhe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
116722520 (hspd1)
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116722520 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
116722520 (hspd1)
Exosomal proteins of breast cancer cells
116722520 (hspd1)
Exosomal proteins of colorectal cancer cells
116722520 (hspd1)
Exosomal proteins of bladder cancer cells
116722520 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
116722520
NCBI-ProteinID:
XP_032422559
LinkDB
All DBs
Position
7:3163805..3172331
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AA seq
575 aa
AA seq
DB search
MFRLPTVMKQVRPVCRALAPHLTRAYAKEVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDNISKGANPVEIRRGVMLAVETVINELKKLSKPVTTPEEIAQVATISANGDV
EIGNIISNAMKRVGRKGVITVKDGKTLQDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGTVFGDEALGLALEDIQAHDFGRVGEVQITKDDTLVLKG
GGSPADIEKRAAEIAEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDIEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALDTLKTANNDQKIGVDIIRRALRIPAMTIA
KNAGVEGSLVVEKILQGASDMGYDAMQGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTEIPKEEKEMPAGMGGMGGMGGMGGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtctacctaccgtcatgaaacaggtgaggcctgtgtgccgggccctggctcct
cacctcacacgagcatacgccaaggaggtgaagtttggggcggacgcacgcgccctcatg
ctgcagggggtggacctgctggctgacgctgtggccgtcaccatggggccaaagggtcgt
actgtcatcatcgagcagagttggggcagtccaaaggtcaccaaggatggcgtgacggtg
gccaaaagcatcgacctgaaggacaagtacaagaacattggggccaagctggtccaagat
gtggccaacaacaccaacgaggaggccggcgacggcaccaccacagccacggtgctggcg
cgggccatcgccaaggagggcttcgacaacatcagcaagggcgccaaccccgtggagata
cggcgtggggtcatgttggccgtggagacggtcatcaacgagctgaagaagctctcgaag
cctgttacaaccccagaggagatcgcacaggtcgctaccatctcagccaatggagacgtg
gaaatcggtaacataatttccaatgccatgaagagagttggccgcaagggagtcatcaca
gtaaaggatgggaagactttgcaggacgagctggagatcattgagggaatgaagtttgac
cgtggttacatctctccttacttcatcaacaccgctaaaggccagaagtgtgagttccag
gacgcctacctgctgctcagtgagaagaagatctccagcgtccagagcatcgtaccggct
ctggaaatcgccaaccagcaccgcaaacctctggtgattgtagctgaggatgtggacgga
gaagctctgagcaccctggttctcaacaggctgaaggtcggtcttcaggtggtcgctgtc
aaagctccaggttttggagacaacaggaagaaccagctgaaggacatggccatcgccacc
ggcgggacggtgtttggtgatgaagctctgggtctggctctggaggacatccaggctcac
gacttcggcagagtgggtgaggtgcagatcaccaaagacgacaccctggttctgaagggc
ggaggcagccccgccgacatcgagaagcgagcggcagagatcgccgagcagctggagaac
accaccagcgactacgagaaggagaagctcaatgagaggctggccaagctgtctgacggg
gtggccgttctcaaggtggggggaaccagcgacatcgaagtgaacgagaagaaggaccgc
gtgacggatgctctgaacgccacccgggccgccgtggaggagggcatcgttctcggcgga
ggctgcgctctgctgcgatgcatcccggcgctggacaccctgaaaaccgccaacaatgac
cagaagatcggtgtggacatcatcaggcgggcgctccgtattcctgccatgaccatcgct
aagaacgctggtgtggagggctccctggtggtggagaagatcctgcagggagcgtcagac
atgggctatgacgccatgcagggagagtacgtcaacatggtggagaagggcatcatcgac
cccacaaaggtggtaaggacggcgctgatggacgccgccggagtcgcgtctctactttcc
accgccgaggccgtcgttacggagatccccaaggaggagaaggagatgccagcaggcatg
ggcggcatggggggaatgggaggaatgggaggcggcatggggttctga
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