Xiphophorus hellerii (green swordtail): 116722648
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Entry
116722648 CDS
T07363
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03015
mRNA surveillance pathway
xhe04261
Adrenergic signaling in cardiomyocytes
xhe04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116722648
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
116722648
09158 Development and regeneration
04382 Cornified envelope formation
116722648
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116722648
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116722648
03036 Chromosome and associated proteins [BR:
xhe03036
]
116722648
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
116722648
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
116722648
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
116722648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P2R3B_EF-hand
EF-hand_13
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
DUF4187
Motif
Other DBs
NCBI-GeneID:
116722648
NCBI-ProteinID:
XP_032422705
LinkDB
All DBs
Position
7:complement(9767557..9791578)
Genome browser
AA seq
579 aa
AA seq
DB search
MPSPQVLQPVLKVKVDELFLNWLSDPGTQSVLKDFLDLIKSGEYNGLGSGNAQDKKSLSF
NENNNVASQKNLSEKKPLGTNSSPAPNSTLPSRSSSNARVTGPNGRVLRRSVSTKKAQVR
TEEPVTTALSENIPKFYFPQGRPQANLNIDSLISKIEKIFSQFPNERATIEDMGLVAKAC
ECPLYWKMPLFYSAGGDRTGFVSVHKFVAMWRKTLQTCHDDASKFVHLLAKPGCNYLEQD
DFIPFLQDVVNSHAGLAFLKEAPDFHSRYITTVIQRIFYNVNRSWTGKITFSELKKSNFL
QNVALLEQEEDVNQLTEYFSYEHFYVIYCKFWELDSDHDLYIDQKDLVRHNDQAISQKLI
ERIFSGTVTRDRRVYKEGRLSYADFVWFLISEEDKKTDTSIEYWFRCMDLDGDGVLSMYE
LEYFYDDQCQKLEAMAIEPLPFEDCLCQMLDLVKPEVEDKITLRDLKRCKLAHIFFDTFF
NIEKYLNHEQRDPFSVIRETETDGQEVSDWEKYAAEEYDILVAEEAENNHCNDVYDNPLS
PLGQHISSELGLTKRHFFEIPTPHCNLDMDEYEYEDDFE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaccacaagttctccaaccggttctcaaagtaaaggttgacgagctgtttctc
aactggctgagtgatcctggaacgcagtcggtcctcaaggattttctagacttaattaaa
agtggcgagtataacggcttgggtagtggaaatgcacaggacaaaaagtcgttgagcttc
aacgagaacaacaacgtagcatcacagaagaacctttcagagaaaaagcccctgggtacc
aattcaagccctgcacccaacagcaccctgccctctcgcagcagcagcaatgcacgggtg
acaggacccaatgggagagtactgcggaggtctgtcagcacgaagaaggcccaggtgagg
acggaggagccggttaccactgcactgagtgaaaacattcccaagttttacttcccacag
ggccggccgcaagccaacctcaacatcgacagcctcatttccaaaattgagaaaatattt
tcacaattcccaaatgaaagggccaccattgaagacatggggctagtcgccaaggcctgt
gagtgtcccctctactggaaaatgccattgttctactcagctggaggcgacaggacgggt
tttgtctcggtacacaagtttgtggctatgtggagaaaaacgctgcagacctgtcacgat
gatgcttctaaatttgtgcacctcttggccaagcctggctgtaattacctggaacaagac
gactttattccattcctgcaggatgtagtgaactcgcatgcaggcttggcctttctaaaa
gaagcaccggactttcactcgcgatatatcaccacggtaattcagaggatattttacaat
gtgaaccggtcatggactggaaaaataaccttttctgagctcaagaaaagtaattttctt
cagaatgtggcgctgctggagcaggaggaagatgtgaaccagctgacagaatacttctcc
tatgagcatttttatgtgatctactgcaagttttgggagctggactctgatcatgacctc
tacattgaccagaaagacctggtgcggcacaatgaccaagccatttcccagaaattgatt
gaaaggatattctcaggaacagttacaagggacagacgggtgtataaggagggaaggcta
agctacgctgattttgtttggttcctcatttctgaggaagacaagaagactgacaccagc
atagagtactggttccgctgtatggacctggacggggacggggtgctcagcatgtatgag
ctggagtacttctacgacgatcagtgtcagaaactggaggcgatggccatcgagcccctt
ccgttcgaggactgcctctgccaaatgctcgacctcgtcaaacccgaggtggaagataag
ataaccctgcgggatctcaagaggtgcaagttggcccatatcttctttgacactttcttc
aacatcgagaagtacctgaaccacgagcaacgggaccctttctctgtcataagggagact
gagacggacggccaagaggtctcagactgggagaagtacgcagcagaggagtacgacata
ctggtggcagaggaggctgaaaataatcactgcaacgatgtgtacgataatcccttgagc
ccgttggggcagcacatctccagcgagctgggtctgacgaagagacacttctttgagatc
cccacgccacactgcaacctggacatggacgaatacgagtacgaagacgacttcgaatga
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