KEGG   Xiphophorus hellerii (green swordtail): 116722668
Entry
116722668         CDS       T07363                                 
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03030  DNA replication
xhe03410  Base excision repair
xhe03420  Nucleotide excision repair
xhe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    116722668 (rfc2)
   03410 Base excision repair
    116722668 (rfc2)
   03420 Nucleotide excision repair
    116722668 (rfc2)
   03430 Mismatch repair
    116722668 (rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xhe03032]
    116722668 (rfc2)
   03036 Chromosome and associated proteins [BR:xhe03036]
    116722668 (rfc2)
   03400 DNA repair and recombination proteins [BR:xhe03400]
    116722668 (rfc2)
DNA replication proteins [BR:xhe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    116722668 (rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    116722668 (rfc2)
Chromosome and associated proteins [BR:xhe03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    116722668 (rfc2)
DNA repair and recombination proteins [BR:xhe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     116722668 (rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    116722668 (rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 RCF1-5-like_lid Viral_helicase1 Mg_chelatase AAA_24 Rad17 AAA_11 RuvB_N AAA_19 nSTAND3 DEAD AAA_assoc_2 MipZ AAA_18 AAA_5 MeaB ABC_tran AAA_30 DNAX_ATPase_lid AAA_28 AAA_25 NTPase_1 MCM RNA_helicase AAA_2 SLFN-g3_helicase FtsK_SpoIIIE bpMoxR DUF815
Other DBs
NCBI-GeneID: 116722668
NCBI-ProteinID: XP_032422733
LinkDB
Position
1:31917597..31922318
AA seq 357 aa
MDVEMADRESDQKPSGSGVKTDTEAGESSSKSSGSSYELPWVEKYRPLKLNEIVGNEETV
SRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARTLLGAAMKDAVLELNASNDRGIDVVR
NKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKI
IEPIQSRCAVLRYAKLTDGQVLARLQEVVEQERLAVSDDGLEAVIFTAQGDMRQALNNLQ
STHSGFGYINSENVFKVCDEPHPLLVKSMLGHCVAGDVDAAYRVVEQLWALGYSPEDIMG
NIFRVCKTFQMAEYLKLEFIKEIGFTHMRVAEGVNSLLQMAGLLGRLCSKTAPPAAS
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggacgtagagatggcagacagggaaagcgaccagaagccgagtggaagcggggtaaag
acggacaccgaggccggggagtcctcgtcgaaaagctccgggagttcctacgagctgccc
tgggtggagaagtaccggccgctgaaactgaatgaaatagttgggaacgaggagacggtg
agccgcctggaggtgttcgccagggagggaaacgtcccgaacatcatcatagcaggacct
ccagggacagggaagaccaccagcatcctgtgtttggcccgcactctgctgggggccgcc
atgaaggacgccgtgttggagctcaatgcctccaacgacaggggcatcgatgtggtgaga
aacaagatcaagatgttcgcccagcagaaagtcacgctgcccaaaggtcgacacaagatc
atcatcctagatgaagcggacagcatgacggatggcgctcagcaggcgctcaggaggatc
atggagatctactccaaaacgactcggttcgctctcgcctgcaacgcctccgacaagatc
atcgagccgatccagtcgcgctgcgctgtgctacgctatgccaagctgacggacggccag
gtgctggcccggctgcaggaagtggtggagcaagagcggctggccgtatctgacgacggg
ctggaggccgtcatcttcacagcacagggggacatgcggcaggcgctgaacaacctgcag
tccacccactctggctttggctacatcaacagcgagaacgtgttcaaagtgtgcgacgag
ccgcaccccttgctggtgaaaagcatgctgggacactgcgtggcgggggacgtggacgca
gcgtaccgggtggtggagcagctgtgggcgctgggctactcccccgaggacatcatgggg
aacatcttcagggtctgcaagacgttccagatggccgagtacctgaagctggagttcatc
aaggagatcggcttcactcacatgcgggtggctgaaggagtgaactccctgctgcagatg
gccggcctgctgggaagactctgcagcaagacggcgccccctgctgccagctga

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