Xiphophorus hellerii (green swordtail): 116722685 Help Entry 116722685         CDS       T07363                                  Symbol itgb5 Name (RefSeq) integrin beta-5   KO K06588   integrin beta 5 Organism xhe  Xiphophorus hellerii (green swordtail) Pathway xhe04145   Phagosome xhe04148   Efferocytosis xhe04510   Focal adhesion xhe04512   ECM-receptor interaction xhe04810   Regulation of actin cytoskeleton xhe04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:xhe00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     116722685 (itgb5)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     116722685 (itgb5)    04148 Efferocytosis     116722685 (itgb5)   09144 Cellular community - eukaryotes    04510 Focal adhesion     116722685 (itgb5)   09142 Cell motility    04820 Cytoskeleton in muscle cells     116722685 (itgb5)    04810 Regulation of actin cytoskeleton     116722685 (itgb5)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:xhe04131]     116722685 (itgb5)   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:xhe04515]     116722685 (itgb5) Membrane trafficking [BR:xhe04131]  Endocytosis   Phagocytosis    Integrins (complement receptors)     116722685 (itgb5) Cell adhesion molecules [BR:xhe04515]  Integrins   Integrin beta subunits    116722685 (itgb5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Integrin_beta Integrin_B_tail PSI_integrin EGF_integrin Integrin_b_cyt I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E EGF_TEN DUF2975 Motif Other DBs NCBI-GeneID:  116722685 NCBI-ProteinID:  XP_032422766 LinkDB All DBs Position 7:2524336..2583693 Genome browser AA seq 797 aa AA seqDB search MWSPGRAALCWMLLETFLRSAGGLNICMSGSATSCEECLLIHPSCAWCAQEDFGKRRSLT SRCDLKQNLQKRGCEPRFIEYPRSTISVLQNSPLSTKGSGPAQYDVVQIMPQRISLSLRP GDQTAFSLQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAEEMGKLTSNFRLGFG SFVDKNMSPFSYTAPKYQENPCNGYKLFPNCVPTFGFRHILSLTDKVDRFNEEVQKQMVS RNRDAPEGGFDAILQAAVCKEEIGWRKEAYHLLVFATDDVPHLALDGRLGGLVQPHDGRC HLNDHNEYSASTKMDYPSLALLGEKLAENNIFLIFAVTKRLYVIYKNFTALIPGTTVEIL DQDSKNVIQLIIAAYNNIRSKVELTVSDHPEDISLSFTATCQDGKPLPGFRKCADLKIGE TVSFDVSVEARGCPPRGTDQTFTIKPVGFKDRLEVAVDYQCDCSCSRTAQINSSLCNSIG MYNCGTCRCEPGYLGAHCECQEGEASSMYLSACREAEGKQVCSGRGECSCNQCLCYESEF GKIYGRFCECDDFSCARHKGVLCSGHGECHCGECKCHAGFVGDNCNCSTEMSLCFSDDGK MCSGRGSCVCGRCQCTEPGAFGETCEKCPTCPDACGTKRECIECRLFNSGRLADNETCQR LCKDKIITVESLENEDDTAVLCVYKTEDDCVMKFTYLEHVSGRSILTALQEPECGGGPSA LTVLLVVVGTILLVGVVLLATWKLVITIHDRREFSRFQSARVRARYLMASNPLYKDPITT HFAEMETFEKSFNGGVH NT seq 2394 nt NT seq  +upstreamnt  +downstreamnt atgtggagcccgggaagagccgctctgtgctggatgctgctggagacgtttctgcgctct gctggaggtctcaacatctgtatgagcggcagcgccacctcctgtgaagaatgcctcctg atccaccccagctgcgcctggtgcgcacaagaggacttcgggaagcgccgctcgctgacg tcgcgatgcgacctcaagcaaaacttgcagaagaggggctgtgagccgcgcttcatcgag taccccaggagtacaatctccgtcctgcagaactcaccgctgagcactaaaggatcggga ccggcccagtacgacgtggtgcagatcatgccccagaggatctccctcagcctgcggcca ggagaccagacggcgttcagcctgcaggtgcggcaggtggaggattacccggtggacctc tactacctgatggacctctcgctgtccatgaaagacgacctggacaccatccgtaacctg ggcaccaagctggcggaggagatggggaagctgaccagcaacttccgtctgggcttcggc tccttcgtggataaaaacatgtcgcccttctcctacacggcccccaagtaccaggagaac ccctgcaacggatacaagctcttcccaaactgcgtgcccaccttcggttttcgccacatc ctctctctgacggacaaagtggaccgtttcaacgaggaggtgcagaagcagatggtgtcc cggaaccgagatgctccagagggcggcttcgacgccatcctgcaggccgccgtgtgcaag gaggagattggctggaggaaggaggcctaccacctgctggtgtttgccacggacgacgtg ccgcacctggctctggatggccggctgggggggctggtccagcctcacgacggccgctgt cacctcaacgaccacaatgagtacagcgcctccaccaagatggactatccgtccctcgct ctgcttggagagaaactggccgaaaataacatcttcctcatcttcgccgtgaccaaacgg ctctacgttatttataagaatttcacagctctcatacctggaaccacagtggagatcctg gaccaggactcgaagaacgtcatccagctgatcatcgccgcctacaacaacattcggtcc aaagtggagctgactgtgtcggatcaccccgaggacatcagcctgtccttcaccgccact tgccaggatgggaagccgctgccaggctttaggaagtgtgcagacttgaagattggagaa acggtgtccttcgatgtgagtgtggaagctcgtggctgcccgccccgcggcaccgaccag accttcaccataaagccggtggggtttaaggaccgcctggaggtggctgtggactatcag tgtgactgcagctgcagccggacggcgcagatcaacagcagcctctgcaactccattggc atgtataactgcggtacctgccggtgcgagccgggctacctgggcgcccactgcgagtgc caggagggcgaggccagcagcatgtacctcagcgcctgccgggaagccgagggcaagcag gtctgcagcggccgcggcgagtgcagctgcaaccagtgcctctgctacgagtctgagttt gggaagatctacggaagattctgcgagtgcgacgacttctcctgcgccagacacaaaggc gtcctctgctcaggtcatggagaatgccactgtggggagtgcaaatgccacgccggcttc gtgggtgacaactgtaactgctccacagagatgtcgctctgcttctcggacgacgggaag atgtgcagcgggcgagggagctgcgtgtgcggccgctgtcagtgcaccgagccgggggcg tttggagagacctgcgagaaatgccccacctgccccgatgcctgcggcaccaaaagggag tgtatcgagtgtcggcttttcaactcggggagactcgcagacaacgagacctgccagcgc ttgtgcaaggataaaatcataactgtggagagcctcgaaaacgaggacgatacagcggtg ctgtgtgtgtataagacggaggacgactgtgtgatgaagttcacgtacctggagcacgtc agcggacgctccatcctcaccgcgctccaggagccggagtgtggaggtggtccgtctgcc ttaacggtcctacttgttgtggtgggcaccatcttactggtgggagtggttctgctggcc acctggaaactggtcatcaccatacacgaccggagagagttctctcgcttccagagcgct cgggtccgcgcccggtacctcatggcatccaaccctctgtacaaggaccccatcaccact cactttgcagaaatggaaacgtttgagaagtcttttaacggcggggtccactga

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