Xiphophorus hellerii (green swordtail): 116722725
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Entry
116722725 CDS
T07363
Symbol
bcor
Name
(RefSeq) BCL-6 corepressor isoform X1
KO
K23215
bcl-6 corepressor
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116722725 (bcor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116722725 (bcor)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
116722725 (bcor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUFD
BCOR
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
116722725
NCBI-ProteinID:
XP_032422835
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Position
7:11395401..11437827
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AA seq
1806 aa
AA seq
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MVDARLTPLAAMGLDRSTLIHDSLRLHGGVVYPGIRTLSAEKSRETPTLPLAYSRDGLPE
LIYKPDSPLDSRKPANGYQSLYKGSHPSLHKPVLVTGAEGLGLERRVGPGEKVSELGLAG
AGGSYLRMPLLSPYPEAGMYPFMDTSKYAALNIYKASLLTQPSPYLPQHLAYPPLCAAQG
ANVTSAAAVSAAERLYYMPPYPPSPISSPLVAPPMRIPAVTVTPTSLVHCQDKGLGVTSP
FSQQLHQPSPHPQHHQAAMDRDRSPSRSSRPSRPPSRKGTTNNSTSSTSTSGTTVGNNSL
PADSSHMSSRLPQPHPLPTLLDKALDLQRPVARIGQPSVSSAAAISASSASTQSIAHPFS
ISSMASEQASSARPSPHKPRSRDGTSENRGAGVEKVRSRSPSLVNFERPANQSQPTKDSA
EKPLDLSGRMIEYGLPANGFSVKMDSVSSGTRYGLPSGRELLNENVSLSPSSHPHSVVCS
TSSKVSERPEMISTLHSSWVVPSPSPSHAQHTSGLPPSPRSNADLGLSQAKGASPSVIKN
KGLERVLPQQRSSSCPRIGEPNLSVPSSQHSGCSLISSRALSPKPNGEWVKHSPSQSVHH
REGTEKSAQTNKRSEPTPDLSSYKRPCLENGHPPPHLFLSQSEAYLNHSLAYANRYLQYP
IPDGLALHSVPISGKGPVYPNPVLLSNNGLYPTHLAGKHPLTYPNLPAGPGTEYLTYNSQ
EMAHPLMQTLSDSKLTDRADATLKPRGQDRPRGAVEEGGIHRDHSAGKETGEGNQMKHDR
EVGVQGQGGSQSKNLPSSAASREKIVCIDLVHSDTDIEPTPTVYKQPSAETSNKGNQNEC
HSSQNLTNTDSETKHQAHLSHSGQTPNLKVNNTDGQQEALFGKGKIPQETPCLVEVSRTS
QTRPELSDAEESTEESSPSPDPGDQDQSTLRCARTSGERSSGKDKRDGSSCAPLAQHNTN
AVKECEREAEKEDNIVDLGESQAEGDDEEEEDEGTQASSKNSRRSSLAKRIANSSGYVGD
RFKCVTTELYADSSKLSREQRALQMEVLSREESNISQPAANWERAMMRFSELELKEKEGG
GGGGLCVSASVAAAGRELADGQRRERALEHCQHTTRQAEREGVRPLYANNRVPVLQRCVA
PRDLVSPGHLAQDGARNAATRESEEGLCMPPTLTPSKEFLDEKVGLGFGAARKRPLIKEE
QDDSEEGEREKRAKLSTDECEQASPDEDDDDDEVRKLKVRIELKGLRLSKPTAGAASPDG
SQFKQERPWPLPRMGNPAQTQRERKIRAAEPEDRAAAQRNDINRKWGCEKLPNGVAAPAL
PPSQPKDRPHQPSLFSGDRGLKEPKRGPPSPAPELCLGGVPPLKSRRHSDTDKPKGKRPC
KTKHTGQRDRDREREREKRKEAAPTSPGQRSAPDLGSAEDDKPAEQRSVPRKRAASPNHY
PCSPLKPCSPAALCPPALLPQANVRAPPEVPPGLHRTPPLEPSAVRPIPPEARRLIVNKN
AGETLLQRAARLGYEEVVLYCLENRVCEVNHRDYAGYCALHEACARGWLSIVQHLLDYGA
DINCSAQDGTRPIHDAVENDHLDVVRVLLSYGADPTLATYSGRSLLKMTRSDGMERFLTD
YFADLQGRSDDDPGLYWEFYGSAVCESAEEGGVYNILADAPGPDNEDEDEKREVFEFEFS
DRPLLPCYNIQVSLSQGPRNWLLLSDVLRRLRMSARAFRQAFPHMEVVTVAEAEFYRQAS
LSQLFSCPEELEGFHPDSKDLLDLVEDSAELAALLGSTLECLDDRWDHQADKLKDKMKAA
GRLASS
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgcaaggttgacgcccctggctgcgatggggcttgaccgaagcactctgata
cacgacagcctccgtctccatggtggagtcgtatacccagggatcagaaccctctcagcg
gagaagagcagagagacacccactctcccactcgcctacagtagggatggtctcccagag
ctaatttacaaacccgacagccccctggacagtcgtaagcctgcaaatggttaccagagc
ctctacaagggcagccacccaagccttcacaagcctgtgttggttactggagctgagggc
cttggcttggaacggcgagtagggcctggagaaaaagtgtcagagctggggctggctggg
gcgggtggcagctacctccgcatgcctttgctaagcccatacccggaagcaggcatgtat
ccctttatggacacatccaagtatgctgctttgaacatatacaaagcctccctgctcacc
caacccagcccctacctaccccagcacctggcctacccacccctgtgtgcagcccagggc
gccaatgttacatctgctgcagctgtttctgctgctgagaggctctactacatgcctcct
taccctccatctcccatttcttctcctctggtggcccctcccatgaggattcctgcggtc
acagtgacccccacttcgctggtacactgccaagacaaagggctcggtgttacatctccg
ttttcacagcagcttcatcaaccctctcctcatcctcagcaccatcaggcagccatggat
agagaccgttctccgagcaggagcagcagaccaagcagacctccgtccaggaagggcaca
accaacaatagcaccagtagtaccagcaccagtggcaccactgtcgggaataatagtctg
cctgctgattcttcccacatgtcctcccgcctcccccagcctcaccctctgcctactctc
cttgacaaagcactggatttgcaaaggccagttgccagaataggacaaccatccgtctct
tctgcagctgcaatatctgcatcctctgcctctacgcagtccattgctcaccctttttct
attagcagcatggcatcagagcaggcctcctctgccagacccagcccccacaaacccagg
tcacgagatgggacctctgagaacagaggtgcaggagtggaaaaagtacgcagcaggtct
ccttcattagtcaattttgagaggccagctaaccaatctcaaccaaccaaagactctgca
gagaagcctctggatttgtccggaagaatgattgagtatgggctgcctgccaatggtttc
tcagttaagatggactctgtgtcatctggcacccgttatggacttccctccggtcgagag
cttctaaatgaaaatgtatccctctccccttcctcccaccctcattctgtggtctgcagc
acttcttcaaaggtctcagagagaccagaaatgatcagcactttacactcatcatgggtt
gtaccaagcccatctccctcacatgcacagcacacgtcgggtttgccaccctctccgagg
tcaaatgcagacctgggcctttcacaagccaaaggcgcctcgccctctgtcatcaagaac
aagggcctagagagggttctccctcagcagcgaagctcgtcctgtccaaggattggagag
cccaacctcagtgttccctcctctcaacactctggctgctctttgatcagctccagggct
ctttccccgaaacctaacggtgaatgggtgaaacacagccccagccagtcagtgcatcac
agagagggaacagagaagtctgcccagacgaataagagaagtgaaccaactccagacctg
tcatcatacaagaggccatgtttggagaatggtcaccctcctccccacctttttctttct
caaagtgaagcttatttgaaccacagcttggcttatgctaacagatatctgcagtacccc
atccctgatggcttggcgctacactccgtcccaatttcaggaaaaggcccagtgtaccct
aaccccgttctgcttagcaacaacggcctttacccaacccacttggctggaaaacaccct
ttaacctacccaaatctcccagctggtccaggcacagaatacctcacttataactcacag
gagatggcccatccgctgatgcagacactctctgacagcaagctgacagacagggcagat
gcaacactaaaaccccggggacaggacagaccacggggagctgtcgaagaaggcgggatc
cacagagatcacagtgctgggaaagagacaggcgaaggcaaccaaatgaagcatgatagg
gaggtaggcgtgcaaggacagggtggcagtcaaagcaaaaacctcccctcatctgcggcg
tccagagaaaagattgtctgcattgaccttgtacactcagacacagatatcgagcctact
ccaacagtctacaaacagccttctgctgagactagcaacaaggggaaccaaaatgaatgt
catagcagtcaaaacctgacaaacactgacagtgagactaaacaccaagcacatctaagc
cactctggacagacccccaacctgaaggtgaacaacactgatgggcagcaagaagcttta
tttgggaaaggaaagattccccaggaaacaccctgtcttgttgaggtatcaaggacgtcc
cagaccagaccagagctctctgatgcagaagaaagcacagaggaaagtagccccagccca
gaccctggggatcaagatcagagcactttacgctgtgcccgcacctcaggggagcgtagc
tctggtaaggacaaaagagatgggagcagctgcgctcctcttgcacagcacaatacaaat
gcagtaaaggagtgtgagagggaggctgaaaaagaggacaatattgttgatcttggggag
tcccaagcagagggagatgatgaagaggaggaggacgaaggtacccaggcttcatctaaa
aactctcgtaggtccagcttggccaaacggatcgcaaactcctctggctacgttggcgac
cgctttaaatgcgtcaccacagagctgtatgctgactctagcaaactgagccgcgagcag
agagcattgcagatggaagtcttatcacgagaggagagtaatataagccaacctgcagct
aactgggagcgggcaatgatgcggttctccgagctggagctgaaggagaaggagggcggc
ggcggcggcggtttgtgcgtttctgcctcggtagcggcagcaggacgggagctggcagac
ggccagcgcagagagagagcgctggagcactgccagcacaccaccaggcaggcagagagg
gagggtgtccgtccgctgtacgccaacaacagagttccggttctccagaggtgcgtggcg
ccgagggacctcgtgtccccgggtcacctggctcaagatggagccaggaatgcggcgacg
agagagtctgaggagggactgtgcatgcctcccactctgacgccatcaaaggagttcctg
gacgaaaaggtcggcctgggcttcggagctgccagaaaacgcccgctcatcaaggaagag
caggacgactcggaggaaggggagcgggagaagagagctaagctttctacggatgagtgc
gagcaggccagtcccgatgaggatgacgacgatgacgaggtgcgaaagctcaaagtccgc
attgagctcaagggactgcgactcagcaagcccacggcgggcgcagcgtcacccgacggc
tcccagttcaagcaggagaggccctggcccctgcctcgcatgggaaacccagcacagact
cagcgggagcgcaagatccgggcggcagagcccgaggaccgggccgcggcgcagaggaac
gacatcaacaggaagtggggctgcgagaagctacctaatggagtagctgctcccgccctt
ccccccagccagccgaaggacaggccacaccagccgagcctcttctcaggtgaccgcggc
cttaaggagccgaagagggggcccccgtcgccggccccggagctctgcctgggaggcgtc
cctcccctcaaatcccgtcgccatagtgacacggacaaacccaagggcaagcggccgtgt
aagaccaagcacacgggccagcgagaccgagacagagagagggagcgggagaagaggaaa
gaggccgcgcccaccagccccggccagcgctcggcgcctgatctgggatcagccgaggac
gacaagccggccgagcagcgcagcgttccgaggaagagagccgcctctcctaatcactat
ccctgctctccgctgaagccctgctcccccgctgcactctgcccgcccgccctgctgccc
caggcgaacgtcagagctccaccggaggtgccgccggggctgcacaggaccccccctctt
gagccctccgctgtgcgccccatcccgccggaggctcggcggctgatcgtgaacaagaac
gccggcgagactctgcttcagagagcagcgcggctcggatacgaggaggtggtgctgtac
tgcctggagaaccgagtctgcgaggtcaaccacagagactacgcgggctactgcgcactc
cacgaggcgtgcgcccggggctggctcagcatcgttcaacatctgctggattatggtgcc
gacatcaactgcagcgcacaggacgggaccagacccatccacgacgctgtggagaacgac
cacctggacgtagtgcgggtcctgctgtcgtacggagccgaccccactctggccacgtac
tctggccgcagcctgctgaaaatgacccgcagcgacggcatggagcgtttcctcaccgat
tattttgctgaccttcagggccgctcagatgacgacccagggctttattgggagttctat
ggcagtgctgtgtgtgaatctgccgaagaaggcggtgtttacaacatcctggcagacgcc
cccggcccagacaacgaggacgaggacgagaaaagggaggtgtttgagtttgagttctct
gaccgacctctgttgccgtgctacaacatccaggtgtccctctcccagggaccaagaaac
tggctgctgctgtccgacgtgctccggcgcctgcgcatgtccgcccgcgccttccgacaa
gccttcccccacatggaggtcgtgacggtggccgaggccgagttctaccggcaggcgtcc
ctgtcgcagctcttctcctgcccggaggagctggagggcttccacccggacagcaaggac
ctgctggacctggtggaagacagcgcggagctggccgctctgctgggctcaacactggag
tgtctggacgaccgctgggaccaccaggcggacaaactcaaggataaaatgaaggcggcg
ggcaggctggcctcatcctga
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integrated database retrieval system