KEGG   Xiphophorus hellerii (green swordtail): 116722726
Entry
116722726         CDS       T07363                                 
Name
(RefSeq) cadherin-4-like
  KO
K06797  cadherin 4, type 1, R-cadherin
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    116722726
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:xhe04515]
    116722726
Cell adhesion molecules [BR:xhe04515]
 Cadherins
  Major cadherins
   116722726
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_pro DUF2254 DUF5527
Other DBs
NCBI-GeneID: 116722726
NCBI-ProteinID: XP_032422878
LinkDB
Position
1:complement(22172601..22444768)
AA seq 934 aa
MRTDFAVVLTTALLFDTIWRNNGEHASQGPCRPGFSQSFYFVQISRDVLQGQGVLKGTPV
SPQKVKFDDCMGNEAVVFQSTDPVFNVRTDGSIFAKGQGASLDETVQFKVTARGPHTNVW
ETVVQLTLIDLSSSGQNENEVTEEAGNISEQNKKKDASQAPTPVIMFPGSHVNSTRGLRR
QKRDWVIPPINVAENSRGPFPQMLVSIRSDQDQNIPIRYSITGVGADQPPNEVFSIDPAL
GKMFVTKPLDREHRSSYHLRAHAVDINGNQVENPIDLYIFVIDMNDNRPEFKNQVYNGSV
DEGSKPDTYVMHLSAFDADDNTTANGMVHYRILSQTPHSPIPNMFTIKSETGDITTAAPG
LDREKVSQYTIIVQATDMEGNLNFGLSNTATAIITVTDINDNPPMLTSGTFSGEVPENTV
DVAVANLTVIDADQPHSPNWNAVYRIISGDPTGHFTIRTDPISNNGMVTVVKPVDFEMNR
SFMLTVVVSNQAHLASGIQSSLQSTAGVIISVKDVNEPPYFPTNPKQIRFEEGVPTGTSL
TTFSASDPDRLQMQQIIRYSKLNDPANWLSINRTSGQIVTTGMLDRESVYVKNNIYEATF
LATDNGSPEASSTGTLQIYLIDINDNPPALVPRESQICERMNKNVNGVNITAADADTDPN
AGPFVFELPNFPSSIRRNWTIARINGDYARLALRYQIYLEPGMYEVPIIVSDSGNPPLSN
RSVIKVKVCPCDENGDCTTLGAVAAAGLGTGAIIFILICIIILLCMVLLFVVWIKRREKE
RQTKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDSLEHIISKPPGVRRVDER
PIIPESQYPIRPVVPHPGDIGDFIHEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSS
LNSSSTGDQDYDYLNDWGPRFKKLADMYGGGDDD
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgaggactgacttcgcagtggtcctgacaacagctcttctttttgatacaatttggagg
aataatggggagcacgcctcccaaggtccctgtcgacctggcttctcgcaaagcttctac
ttcgtccagatatcgagggatgtactgcaaggccagggcgtacttaaaggtactccagta
tcaccgcaaaaagtgaagtttgacgactgcatggggaatgaggccgtggttttccagagc
accgacccggtcttcaacgtccggacagatggatccatctttgccaagggacagggagcc
agcttggatgagacagttcagtttaaagtgacagcgcgtggccctcacacaaatgtctgg
gagactgtggttcaactgaccctgattgacctgtcgtcatcagggcaaaatgaaaatgag
gtcacagaggaagcagggaacatcagtgagcaaaacaagaagaaggacgcgtcgcaggca
ccaactcctgtcatcatgttcccagggtcccacgtcaacagcaccaggggtctccgaagg
cagaagagagactgggtgatcccaccaatcaacgttgcagaaaattctcgtggaccattc
cctcagatgctcgtcagtattcgttccgaccaagaccagaacattccaatccgatacagc
attactggggtgggagcagatcaaccacccaatgaggtgttcagcatcgaccctgcgctc
ggaaagatgtttgtcaccaaacctctggatcgagaacatcgatcttcttatcatctgcgg
gcccatgcagtggacataaatgggaaccaggtcgagaatccgattgatctgtacatcttc
gttatcgacatgaatgacaacagaccagagttcaaaaaccaggtctacaatggttctgtg
gatgaaggttctaaaccagatacttatgtaatgcatctatctgcatttgatgccgatgac
aacaccacagctaatggaatggtgcactatcggatcctgtcccagacaccgcacagcccc
atccctaacatgttcaccatcaagagtgagacgggggacattacgacagcggcgcctgga
ctcgacagagagaaagtgtcccagtacaccatcattgtgcaagccacagacatggaggga
aacctcaactttggcctttccaacacagccactgccatcatcactgtcacggacatcaac
gataaccctcccatgctgacctcaggaactttttctggcgaggtcccagagaacacagtg
gatgttgcggtggctaatctgactgtaatagatgctgaccagcctcattctcctaactgg
aacgccgtttacaggatcatcagtggggacccaactgggcactttaccatccgcactgat
cccatttccaataacggcatggtcaccgtggtgaagccagtcgatttcgagatgaaccgg
tccttcatgctgacagtggtcgtgtcaaaccaggcccacctggccagcggcatccagtct
tcactccagtcgactgctggagtcatcatatctgtgaaggacgtcaacgagcccccttac
ttccccaccaaccccaaacagatccgattcgaggaaggcgttcctactggcaccagcctg
accactttctcagcctcagatcctgacagactccagatgcaacagataatcaggtattca
aagctgaacgatcccgcaaactggctgtctattaacagaaccagcggtcagattgtaaca
actggaatgctcgaccgggagtccgtctacgtaaaaaacaacatatacgaagctactttt
ctggctacagacaatggctctcctgaagccagcagcacaggcacattgcagatctatttg
atagatattaatgacaaccccccggcgctcgtaccaagggagtctcagatctgcgaaagg
atgaacaaaaacgtcaatggtgtcaacatcactgccgccgatgctgacacggatcccaat
gctggaccctttgttttcgagctgcccaacttccccagcagcatccgacgcaactggacc
attgcacggatcaatggtgattatgcccgtctcgctcttcggtaccagatctacttagaa
ccaggaatgtacgaggtccctatcattgtgtcagactctggcaaccctccgttgtccaac
aggtctgtcatcaaagtgaaggtttgtccttgcgatgaaaatggagactgtaccacactt
ggtgctgtcgcggccgctggcctggggactggagccatcatcttcatcctaatttgcatc
atcatactgctgtgcatggtgctgttgtttgtggtatggatcaagcgcagggagaaagag
aggcagacgaagcagttgctgattgaccctgaagatgacgtccgagacaacatcctcaaa
tacgacgaggagggcggaggagaagaggatcaagactacgacttgagccagctgcagcag
cccgactctttagaacacatcatcagcaagccgcctggcgtacgcagagttgacgagagg
cccatcatcccagagtctcagtaccccattagaccagttgtgccccatcctggagacatt
ggagactttatccatgagggtctgcgggctgcagacaacgaccccacagcgcctccgtat
gattccctgctcgtttttgactatgagggcagcggctccaccgccggctcagtcagctcc
ctcaactcttccagcacaggagaccaggactatgactacctcaacgactggggaccccgt
tttaagaagttggctgacatgtatgggggtggggatgacgattaa

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