Xiphophorus hellerii (green swordtail): 116722766
Help
Entry
116722766 CDS
T07363
Symbol
ttf2
Name
(RefSeq) transcription termination factor 2 isoform X1
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116722766 (ttf2)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116722766 (ttf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Zn_ribbon_GRF
DEAD
Thioredox_PDIA6_C
Motif
Other DBs
NCBI-GeneID:
116722766
NCBI-ProteinID:
XP_032422930
LinkDB
All DBs
Position
7:complement(7092938..7105461)
Genome browser
AA seq
1128 aa
AA seq
DB search
MEIVKCDSHGSVCMLKTGVKEGPNKGKSFYICIDKQGCDFTQQASIAPSHCLHHEESVVE
LQALSYSQQQQSHRLYYRCAVGKREGQRWCGNVPWTAQEKERRTPLTDSQLQPSCLPRVR
NPFKAPDKTDKPSERRRMQSGGCEEKEGEKKTGRASHNAEGRQRSQKENTEALGAEERKS
SAPETYQGKLLPAGMKVKKRISSEESKSKADGVDRTAVRTQDKAGKSSAEEGESEKTIST
RDIEKISQMCPDLLKNIPQEATNSQTSSLSQNEPTAEKSVAESVPGRSSQSSRGADCASS
AAVKTKTHQEEEDDDVVLVSVKPAARQTPPASSTVQKTITSFPGFQSAAQVGDPKGMHCL
LSAQLQQKKATLSLVNVAALPDKGERLRLQVKQLEDALESLSLAAASQPEPAEESGSGGS
AAGSARPVVNPFSRPGGTVLLPSAPVPGPVRHQASSSSVGIQLSQGNAQTFGADLQMHPY
YGGRMTNERLLEVKNATCEAIDHLHKSLESCPDPEDEASDPRGIKVPLLAHQRRALAWLL
WREAQNPCGGILADDMGLGKTLTMIALMLRKKMEAKKEGEKKEEKKLDSWISKSDSSIVS
SKGTLVICPASLIHHWKKEIERHVKTGRMSVYLYHGSSRERSARALADYDVVVTTYSLVS
KEIPVEKEDADNPGKDPDHVPSRSGPLLRVTWARVILDEAHNIKNPKVQTSMAVCQLRAR
ARWAVTGTPIQNNLLDMYSLLKFLRCSPFDEYKLWKAQVDNGSSRGRERLNILTKTLLLR
RTKDQLDSMGKPLVSLPKRTCEVHQLKLSEDEQAVYDVVFAQSRSTLQNYLKRHEEKDLD
KGNTSSVNPFDKVAQEFGVSQADPARSGSRQASSTVHILSLLLRLRQCCCHISLLKKTLD
SSELQGDGIVLSLEEQLNALSLSSTPSPLGPDPKDTVALNGTRFPSQLFEETSESTKISA
ITSELMAIKEKSDNQKSVIVSQWTSMLNIIAVHLRRMGLTYGVIDGTVNPKRRMDLVEEF
NTNPRGPQVMLVSLCAGGVGLNLIGGNHLFLIDMHWNPALEDQACDRIYRVGQRKDVTIH
RFVCEGTVEDKIAMLQTKKKELAQNVLSGTGSTVSKLSLADLKIIFGV
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagttaaatgtgattcacacggtagtgtgtgtatgctaaaaaccggtgtgaaa
gagggaccaaataaaggcaagagcttctatatttgcattgacaagcagggctgtgatttc
acccagcaggccagtatcgctccttcccactgtctgcatcacgaagaatcagtggtggag
ctgcaggcgctcagctacagtcaacagcagcagagccaccgactctactacagatgtgct
gtcgggaaaagagaaggtcagagatggtgtggaaacgtgccctggactgctcaagaaaaa
gaaaggagaacccctctaactgactcccagctgcagccatcctgcctcccacgtgtcaga
aatccctttaaagctcccgacaagacggacaaaccttcggagcggagacgcatgcagagc
ggtgggtgtgaagagaaagaaggggagaagaaaactgggagagcgagtcataacgcagaa
ggaagacaacgctctcagaaggaaaatacggaggccctaggcgcagaggaaagaaagtcg
agcgcacctgaaacatatcaaggtaagctgctcccagcaggaatgaaggtaaagaagagg
atttcaagtgaggagagcaagtccaaagctgacggcgttgatagaacagctgttaggacg
caagacaaggctgggaaaagttctgcagaggagggagagtcggaaaaaaccatttccact
cgagacattgagaaaatcagtcaaatgtgccccgacctactcaaaaatataccacaggaa
gcaaccaatagtcaaacctcttccttgagtcagaatgagcctacagcggagaagagcgtt
gctgaatctgtccccggcagaagcagccagtcgtccagaggagccgattgtgcctcttca
gcggctgttaagaccaagacccaccaagaagaggaggatgacgacgtagttttggtttca
gtgaaaccggcggctcgccaaacccccccggcttcttctacggtccaaaaaacgatcacc
agctttccagggtttcagtcggctgcccaggtgggcgacccaaaggggatgcactgtctg
ctcagtgcccagcttcaacagaagaaggccacgctgtctttggtgaacgtggcggctctg
ccagataaaggagagaggctgaggttgcaggttaaacagctggaggacgctctggagtct
ctaagcctcgctgctgcttctcagcccgaacccgcggaggagtccgggagcggcggctct
gctgccggctccgctcggcccgttgtcaatccattcagcaggccgggcggaactgtcctg
ctcccctccgctccagtaccagggccagtccggcaccaagcttccagcagctctgtgggg
attcaactgagccagggaaacgctcaaacctttggagcagatctccaaatgcacccttat
tatggcggcaggatgacgaatgagcgcctgctggaggtgaagaacgccacctgcgaggcc
atcgaccatcttcacaaatctctggagtcgtgtccggatcccgaggacgaagcttcagac
cccagaggcatcaaggtgccgctcctggcccatcagaggagagctttagcctggctgctc
tggagggaagctcagaatccatgtggaggaattctggctgacgacatgggcttgggcaaa
acactgaccatgatcgctctcatgctgagaaaaaagatggaggccaaaaaagaaggagaa
aagaaagaagagaagaagctggactcctggatctctaaaagcgattccagcattgtgtct
tctaaaggcactctggtcatctgtcccgcctccctgattcaccactggaagaaggagatt
gagcggcatgtcaagacgggcaggatgtcggtgtatctgtaccacggttccagccgggag
agaagcgccagagcactggcagattacgacgtggtcgtgaccacatacagtttggtctct
aaggagattcctgtcgaaaaggaagatgctgataatcccggcaaagatcccgatcatgtg
ccgtcacgttcaggccctctgctgcgagtgacctgggcccgtgtgattctggacgaagcc
cacaacattaaaaaccccaaagtgcagacctccatggccgtctgccagctgagagcccgc
gcccgctgggctgtcaccgggacccccatccagaacaacctgctggacatgtactctctg
ctgaaattcttgcgttgttctccgttcgacgagtacaagctgtggaaagctcaggtggac
aacggctccagcaggggcagggagagactcaacatcctgacgaaaactctgctgctgcga
cgcaccaaagatcagctggactccatgggaaaaccgctggtgtctcttccgaagcggacc
tgtgaagtgcatcagctcaaactctctgaggacgagcaggctgtgtatgatgtggtgttc
gctcagtccaggtctactctgcagaactatctgaagagacatgaagagaaggatttggac
aagggaaacacgtccagcgtcaatccgtttgataaagtggcccaagagttcggtgtgtcc
caggctgaccctgccaggtcgggctctcgccaggcatccagcaccgttcacatcctctct
ctgctgctgcgcctcagacagtgctgctgccacatctctcttcttaaaaagacgttggac
tcgtctgagctgcagggtgacgggatcgtactgtcgctggaggagcagctgaacgctctg
tcgctctcctcgaccccgtcgccattgggccctgaccccaaagacaccgtggctctgaac
ggcacccgctttccctcacagctgtttgaggagaccagtgaaagcaccaagatttctgcg
atcacatctgagctcatggcgataaaagagaagagtgacaatcagaaaagcgtgatcgtg
tctcagtggaccagcatgctcaacatcatagcagttcatctgcggcggatgggcttgact
tacggggtcatcgacggcaccgtgaaccccaaacggcgcatggacctggtggaagagttc
aacacgaaccctagaggacctcaggttatgctggtttctctttgtgctggtggggttgga
ctcaaccttattggagggaatcatctcttcctcattgacatgcactggaatccagccttg
gaggatcaggcctgtgaccgaatctatagagtgggacaacgtaaagacgtcaccattcac
aggtttgtgtgtgaaggaaccgtagaggacaagattgcaatgctgcagacgaagaagaaa
gagcttgcccagaatgtgctttcaggaacaggaagcacagtctctaaactctcattggcc
gatctcaaaatcatttttggtgtttag
DBGET
integrated database retrieval system
