Xiphophorus hellerii (green swordtail): 116722810
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Entry
116722810 CDS
T07363
Name
(RefSeq) ras-related protein Rab-33B-like
KO
K07920
Ras-related protein Rab-33B
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116722810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116722810
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116722810
04031 GTP-binding proteins [BR:
xhe04031
]
116722810
Membrane trafficking [BR:
xhe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
116722810
Others
Specific organelles associated proteins
Auto phagosome
116722810
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
116722810
GTP-binding proteins [BR:
xhe04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
116722810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
SRPRB
G-alpha
TniB
Motif
Other DBs
NCBI-GeneID:
116722810
NCBI-ProteinID:
XP_032423018
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All DBs
Position
7:11262363..11265957
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AA seq
234 aa
AA seq
DB search
MAIENKPEEEFDTVFNLNDSLELSAHSERDCGKARIFKIIVIGDSNVGKTCLTYRFCGGT
FLKNPEATIGVDFRERTVVLDGETIKLQIWDTAGQERFRKSMVEHYYRSVHAVIFVYDVT
NLPSFESIPEWIEECSKHSVGPLVPRIVVGNKCDLREHRQVPASAAHCLADSYNFPLFET
SAKDPAEKEHVDAIFLTLAYRLKSHKPLRLKQLSESSVRELRNQREQETTFCQC
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggcaatagaaaacaaaccagaggaagaatttgacacagttttcaatctgaatgattcc
ctggagctatccgctcattcagagcgtgactgtggaaaggcgcgcatcttcaagataata
gtcataggagactcaaacgtggggaagacgtgcctgacttaccgcttctgcgggggcact
ttcctgaaaaacccagaggcaactatcggggtggatttcagggagaggacggtggtgctg
gacggagagaccatcaagttgcagatttgggacacagcgggtcaggagcgtttcaggaag
agcatggtggagcactactaccgcagcgttcacgccgtcatctttgtgtatgacgtgacc
aatctgccatccttcgaaagcatccccgagtggatcgaagagtgcagcaaacactccgtg
gggcccctggtgccgcgcatcgtcgtgggaaacaaatgtgacctgagggaacatcggcag
gtgcccgcctctgccgctcactgtcttgccgacagctacaacttccccctattcgagact
tcggccaaagaccccgctgagaaggagcatgttgacgccatcttcctgactttagcttat
cggctgaagagccacaagcccctgagactgaagcagctgagtgagagctctgttagggag
ctgaggaaccagagagaacaggaaacgacattttgtcagtgctaa
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integrated database retrieval system