Xiphophorus hellerii (green swordtail): 116722870
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Entry
116722870 CDS
T07363
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
KO
K12897
transformer-2 protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116722870 (tra2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116722870 (tra2b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116722870 (tra2b)
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116722870 (tra2b)
Spliceosome [BR:
xhe03041
]
Common components
Common spliceosomal components
SR proteins
116722870 (tra2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
116722870
NCBI-ProteinID:
XP_032423123
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All DBs
Position
7:19626764..19633469
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AA seq
281 aa
AA seq
DB search
MSDNDKGRESRSASRSASPRAPAKSASRTPARSKDGSHHSRSKSWSRSRSRSGSHSNHGS
HKHYSHSRSRSRSGRRRSRSRSYSGERRHRSLSHSPMSNRRRHIGNRANPDPNACLGVFG
LSLYTTERDLRDVFSKYGSLADVSIVYDQQSRRSRGFAFVYFENTADAKEAKDRANGMEL
DGRRIRVDFSITKRPHTPTPGIYMGRPTYGSGGGGGGGPGGPRRYSRDYDRGYDRGYDRG
GYDRYDDRDYYRSYRRRSPSPYYRGAYRSRSRSRSYSPRRY
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaatgataagggccgggagtctcgctccgcttccaggagcgcgagtccccgt
gcccctgcgaagtcggcgagccgcactccagctcgttcaaaagatggatcccaccattcc
cgttctaagtcctggtcccgctccaggtccagatcaggctcccattctaaccatggctct
cataagcactacagccattcccggtctcgctccaggtccggccggcgccggtcccgcagc
cgctcctacagcggagagcgccggcacaggagcctcagtcattcccccatgtctaatcgc
cgcaggcacatcggcaatcgggctaatccagatccaaatgcttgcctgggagtgtttggc
ctgagcctgtacaccacagagagggacctgagagacgttttctctaaatacgggagcctg
gcggatgtcagcatcgtgtacgaccagcagtccaggcgctccaggggctttgcttttgtt
tactttgagaacacagctgatgctaaagaggcaaaggaccgagcgaatggcatggagctg
gacggtcgaagaatccgggtggatttctcaatcacaaaaagacctcacaccccgaccccg
ggaatctacatgggacgtcccacatatggcagtggcggtggcggcggcggcggtcctggt
ggtccccggcgctattcacgtgactacgaccgcggatatgaccgcggatatgatagaggc
ggctatgatcgctatgatgacagggactactacagatcatacagacgaagatctccatca
ccatactacagaggagcatacagatctcggtcaagatcccggtcttattctcctcgtcga
tattga
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